Chy1G020210 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCAATTTTGCCGTTTTTCATCCCGCTCCGATCACAGCTTCTTCTTCTTCTTCTTCTTCAGGAAATTACCAACCTAATCGCCGGAGCGCTGCGGCGCCGAAATGGTGGTCGCCGATTTTCGGATGGTCTTCCGAACCGGACTACGTCGTTTCTTCCGCCGCGGAAGTACAATCCATTCAGAATGCCGATCCGGAGCTTGACGGTGGAAGAATCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTACTCCGAATGAAAACGCGGGAGAGCTCCACTTTCCATGATATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATTGATCTATGAAGATTTGGCGCAGTGAG ATGGCCACCAATTTTGCCGTTTTTCATCCCGCTCCGATCACAGCTTCTTCTTCTTCTTCTTCTTCAGGAAATTACCAACCTAATCGCCGGAGCGCTGCGGCGCCGAAATGGTGGTCGCCGATTTTCGGATGGTCTTCCGAACCGGACTACGTCGTTTCTTCCGCCGCGGAAGTACAATCCATTCAGAATGCCGATCCGGAGCTTGACGGTGGAAGAATCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTACTCCGAATGAAAACGCGGGAGAGCTCCACTTTCCATGATATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATTGATCTATGAAGATTTGGCGCAGTGAG ATGGCCACCAATTTTGCCGTTTTTCATCCCGCTCCGATCACAGCTTCTTCTTCTTCTTCTTCTTCAGGAAATTACCAACCTAATCGCCGGAGCGCTGCGGCGCCGAAATGGTGGTCGCCGATTTTCGGATGGTCTTCCGAACCGGACTACGTCGTTTCTTCCGCCGCGGAAGTACAATCCATTCAGAATGCCGATCCGGAGCTTGACGGTGGAAGAATCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTACTCCGAATGAAAACGCGGGAGAGCTCCACTTTCCATGATATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATTGATCTATGAAGATTTGGCGCAGTGAG MATNFAVFHPAPITASSSSSSSGNYQPNRRSAAAPKWWSPIFGWSSEPDYVVSSAAEVQSIQNADPELDGGRIRSRFAPGCFTEEKAKLLRMKTRESSTFHDIMYHSAIASRLASDLSDRSKK*IDL*RFGAVX Homology
BLAST of Chy1G020210 vs. ExPASy TrEMBL
Match: A0A0A0K8X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433380 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 9.3e-58 Identity = 119/126 (94.44%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of Chy1G020210 vs. ExPASy TrEMBL
Match: A0A5D3CF29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002310 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.2e-54 Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of Chy1G020210 vs. ExPASy TrEMBL
Match: A0A1S3CEC0 (uncharacterized protein LOC103499770 OS=Cucumis melo OX=3656 GN=LOC103499770 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.2e-54 Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of Chy1G020210 vs. ExPASy TrEMBL
Match: A0A6J1KTB2 (uncharacterized protein LOC111498038 OS=Cucurbita maxima OX=3661 GN=LOC111498038 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46 Identity = 99/123 (80.49%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Chy1G020210 vs. ExPASy TrEMBL
Match: A0A6J1H6P9 (uncharacterized protein LOC111460952 OS=Cucurbita moschata OX=3662 GN=LOC111460952 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.7e-46 Identity = 99/123 (80.49%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Chy1G020210 vs. NCBI nr
Match: XP_008461069.1 (PREDICTED: uncharacterized protein LOC103499770 [Cucumis melo] >KAA0058783.1 uncharacterized protein E6C27_scaffold339G002570 [Cucumis melo var. makuwa] >TYK10577.1 uncharacterized protein E5676_scaffold459G002310 [Cucumis melo var. makuwa]) HSP 1 Score: 219 bits (559), Expect = 1.96e-71 Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of Chy1G020210 vs. NCBI nr
Match: XP_038898524.1 (uncharacterized protein LOC120086132 [Benincasa hispida]) HSP 1 Score: 204 bits (518), Expect = 3.06e-65 Identity = 104/123 (84.55%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of Chy1G020210 vs. NCBI nr
Match: KAE8646454.1 (hypothetical protein Csa_016484 [Cucumis sativus]) HSP 1 Score: 198 bits (503), Expect = 4.72e-63 Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of Chy1G020210 vs. NCBI nr
Match: XP_023004861.1 (uncharacterized protein LOC111498038 [Cucurbita maxima]) HSP 1 Score: 195 bits (495), Expect = 9.80e-62 Identity = 99/123 (80.49%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Chy1G020210 vs. NCBI nr
Match: XP_022960101.1 (uncharacterized protein LOC111460952 [Cucurbita moschata] >KAG6593414.1 hypothetical protein SDJN03_12890, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025762.1 hypothetical protein SDJN02_12260, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194 bits (494), Expect = 1.39e-61 Identity = 99/123 (80.49%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Chy1G020210 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 8.2e-22 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Chy1G020210 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18 Identity = 51/102 (50.00%), Postives = 65/102 (63.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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