Chy1G019050 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G019050
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH01: 24332646 .. 24334488 (-)
RNA-Seq Expression	Chy1G019050
Synteny	Chy1G019050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGTCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTTGATTCACCGAGCCGTTCTTCCTTCTTCCATTGCCAGAATTCAATTTCACTCGAACGCCTCACCATTTCTTTCTTTCAGGTATCCGTCGTCTAATCACTCCTCTTCGATTCCTCGTATTCAACTCATAAATCTCTTAGAAAATTTCGGGATTTTTATATGCTGTAATGAGACTAATGAGCATGCTTGCAATGAAGTTCATCTGTTACTTAGTCCTGTAAAGTGGATCGACTGTTTATTTTTGTTGAAAATGGAATGTAGCTGGCAGTTGCTATTTCCTAATTGCTTTTGGCTTCTAACGCCAAGTGCTTCCACTAGTATTTGGTTTTATTTTTCTGAGTTTATCTTTGACGCACCTTTGATTTGATTCCTACTTAAGCAGTTTTCTTCGATCCCGGTATTCAACATCTATAATCTCAGGGATATCCGTATTTTTTTGTGTTGAATGGAGCATGTTAGCATTAAAGTGAATCCTCCTTGATTTCTGTGTTGAAAGTGGAATTGAACGATTGTTGCTGACTTGCTGGTTCCTAGTTGGTTTCAGCTACTGACGCAAACAACTTATTAACATTCTGAATGTTTTATAGTTTAAATGTTATGAACCTTTGATTTGATACCTATTTTAGCAGTCCTCTTCGACAAATTGCTTCTGGCTTCGGCATGTATACTTTCAAAGGATATCTGAAGTTATTATTTGGTGTTGCACTGTTGTGAGCGTTTTAGCATTCAAGTTCGTCTATATCTTTGTTATGTAAAGGGAATCCATTTTGATTCTTGTGCTGAAAATTGAATTTGAAGGTAGTTACTAAACCCTAATCCCCAATTAAACACACACAGCCCTCGGGCCAAACAAGGAAGCTCACTCCACTCCACCTAAACCCTCAGCCCAAACAGGCCCAAAGCTTAGAATAGTGTTAGGATTGAGACTTCCTGATCTTGTTCGACGTCTACATGGGATGGATCTTTGATTTGATACTTATTTGGTCATTACATGAGCATGAGTAGAACTTTGTCCATTATTTTTAAATAGGGAAAGTCTTATTTGTTCGTTCTGAAGGCTCTTCTCTGATAGTGAAGCAGTTCTACTGTAGATTTCCGGGAAATAATAATTCTAGAATGGCCTATATGGTTTCTTGAAAAAAGAATTGAAACCTATTATCTTCTCAAGTTGTCAGTTGACTCATCTGTGCATTCTCTGCCAAGTTCCTCTTTAGAATCTTGTGGAGTATTGGGGTGGAAAATAAAGTTTCCCATCATTCTTGGTTCCATCTTTTAGGATCTTTATTGGCCTTTGTCTGTTTAGCTTTTCGCTTTTTGGTTTCTTTTCATATCATTTACTACTGGTAATTATTTACTCAGAAAGATATATATGGCAGGCTTGTATAAGGGCCAAACCAGTATCTGAAATTCTCTTTTCACATGCTAAGCAGATTTACTAGAAACTATAATACATTTAAGAATTAAGAGTATGAAATGACTGATATTTGTATTCGCAATATTTACTTAGACGAGTGCTTGTGTGATTTCTTTTATACAGGTACAGGAAGAACATCATTGGATTAGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATCCACAGATGGGAATTCCATCAAGGAGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCGGTGCCCAAGGTCCTCCATTTCTTACCATTTTAGCTGGATTTTTTGTCTTATCCCTTATACTATGGATATTTAGTTCTGCTGTTACGTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAA

mRNA sequence

ATGGCTTCCGTCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTTGATTCACCGAGCCGTTCTTCCTTCTTCCATTGCCAGAATTCAATTTCACTCGAACGCCTCACCATTTCTTTCTTTCAGGTACAGGAAGAACATCATTGGATTAGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATCCACAGATGGGAATTCCATCAAGGAGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCGGTGCCCAAGGTCCTCCATTTCTTACCATTTTAGCTGGATTTTTTGTCTTATCCCTTATACTATGGATATTTAGTTCTGCTGTTACGTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAA

Coding sequence (CDS)

ATGGCTTCCGTCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTTGATTCACCGAGCCGTTCTTCCTTCTTCCATTGCCAGAATTCAATTTCACTCGAACGCCTCACCATTTCTTTCTTTCAGGTACAGGAAGAACATCATTGGATTAGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATCCACAGATGGGAATTCCATCAAGGAGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCGGTGCCCAAGGTCCTCCATTTCTTACCATTTTAGCTGGATTTTTTGTCTTATCCCTTATACTATGGATATTTAGTTCTGCTGTTACGTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAA

Protein sequence

MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLLGLVVKLISAK*

Homology

[Close]

BLAST of Chy1G019050 vs. ExPASy TrEMBL
Match: A0A0A0K9W1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429580 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 121/128 (94.53%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
           MASVFAAPPSQLNLTSRRS IHRA LPS IA IQFHSNASPF SFRYRKNIIGLELRQRS
Sbjct: 1   MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS 60

Query: 61  IAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLLGL 120
           IAASKSTDGNSIKEENSSSKASSDD  AQGPPFLTILAGFFVLSLILWIFSSAVTSLLGL
Sbjct: 61  IAASKSTDGNSIKEENSSSKASSDD--AQGPPFLTILAGFFVLSLILWIFSSAVTSLLGL 120

Query: 121 VVKLISAK 129
           VVKLISAK
Sbjct: 121 VVKLISAK 126

[Close]

BLAST of Chy1G019050 vs. ExPASy TrEMBL
Match: A0A6J1GPL5 (uncharacterized protein LOC111455984 OS=Cucurbita moschata OX=3662 GN=LOC111455984 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 6.1e-38
Identity = 100/130 (76.92%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQR- 60
           MAS+F+APPS+LNLTSR SLIH AVLPSSIA IQ+HSNA P  SFRYR N  GLELRQR 
Sbjct: 1   MASIFSAPPSRLNLTSRPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYR-NTKGLELRQRS 60

Query: 61  -SIAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLL 120
            SI AS S+DGNSIKEEN SSKASSD   AQGPPFLTILAG FV SL+LW+ SSA TSL+
Sbjct: 61  FSITASNSSDGNSIKEENGSSKASSD---AQGPPFLTILAGIFVFSLLLWMLSSAATSLI 120

Query: 121 GLVVKLISAK 129
           GLVVKLIS K
Sbjct: 121 GLVVKLISTK 126

[Close]

BLAST of Chy1G019050 vs. ExPASy TrEMBL
Match: A0A6J1JUC2 (uncharacterized protein LOC111488436 OS=Cucurbita maxima OX=3661 GN=LOC111488436 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 9.7e-36
Identity = 97/128 (75.78%), Postives = 105/128 (82.03%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQR- 60
           MAS+FAAPPS+LNLTSR SLIH AVLPSSIA IQ+HSNA P  SFRYR N  GLEL  R 
Sbjct: 1   MASIFAAPPSRLNLTSRPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYR-NTKGLELSPRS 60

Query: 61  -SIAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLL 120
            SI AS S+DGNSI+EEN SSKASSD   AQGPPFLTILAG FV SL+LW+ SSA TSL+
Sbjct: 61  FSITASNSSDGNSIEEENGSSKASSD---AQGPPFLTILAGIFVFSLLLWMLSSAATSLI 120

Query: 121 GLVVKLIS 127
           GLVVKLIS
Sbjct: 121 GLVVKLIS 124

[Close]

BLAST of Chy1G019050 vs. ExPASy TrEMBL
Match: A0A5A7UVF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001230 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.2e-31
Identity = 79/86 (91.86%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
          MAS+F APPSQLNLTSRRSL HRAVLPSSIA IQF SNASPFLSF  RKNIIGLELRQRS
Sbjct: 1  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS 60

Query: 61 IAASKSTDGNSIKEENSSSKASSDDA 87
          IAASKSTDGNSIKEENSSSKASSDDA
Sbjct: 61 IAASKSTDGNSIKEENSSSKASSDDA 86

[Close]

BLAST of Chy1G019050 vs. ExPASy TrEMBL
Match: A0A6J1KVQ7 (uncharacterized protein LOC111498025 OS=Cucurbita maxima OX=3661 GN=LOC111498025 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.1e-29
Identity = 88/131 (67.18%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRR-SLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQR 60
           MASVFAAPPSQL L+S R SL H+A LP SI  ++FH N  P  SFRY KN  GL+LRQR
Sbjct: 1   MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRY-KNTKGLKLRQR 60

Query: 61  --SIAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSL 120
             SI AS S+DGNS KEEN  SK + D   AQGPPFLTILAGFFV SL+LWI SS+VT+L
Sbjct: 61  SFSITASNSSDGNSTKEENDGSKVTGD---AQGPPFLTILAGFFVFSLVLWIVSSSVTTL 120

Query: 121 LGLVVKLISAK 129
           + LVVKLIS K
Sbjct: 121 IALVVKLISTK 126

[Close]

BLAST of Chy1G019050 vs. NCBI nr
Match: XP_011659472.1 (uncharacterized protein LOC101220885 [Cucumis sativus] >KGN45172.1 hypothetical protein Csa_016505 [Cucumis sativus])

HSP 1 Score: 213 bits (542), Expect = 7.12e-69
Identity = 121/128 (94.53%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
           MASVFAAPPSQLNLTSRRS IHRA LPS IA IQFHSNASPF SFRYRKNIIGLELRQRS
Sbjct: 1   MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS 60

Query: 61  IAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLLGL 120
           IAASKSTDGNSIKEENSSSKASSDDA  QGPPFLTILAGFFVLSLILWIFSSAVTSLLGL
Sbjct: 61  IAASKSTDGNSIKEENSSSKASSDDA--QGPPFLTILAGFFVLSLILWIFSSAVTSLLGL 120

Query: 121 VVKLISAK 128
           VVKLISAK
Sbjct: 121 VVKLISAK 126

[Close]

BLAST of Chy1G019050 vs. NCBI nr
Match: XP_038899532.1 (uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida])

HSP 1 Score: 168 bits (425), Expect = 4.79e-51
Identity = 101/130 (77.69%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
           MAS+FAAP  +LNLTSR SLIHRA LPSSI  IQFHSNASPF SFRYR N  GLELRQRS
Sbjct: 1   MASIFAAPSFRLNLTSRPSLIHRAALPSSIDAIQFHSNASPFPSFRYR-NTRGLELRQRS 60

Query: 61  --IAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLL 120
             I AS S+DGNSIKEEN SSKAS+D   AQGPPFLTILAG FV SL+LWIFSS VTS L
Sbjct: 61  FSITASNSSDGNSIKEENGSSKASTD---AQGPPFLTILAGIFVFSLVLWIFSSVVTSFL 120

Query: 121 GLVVKLISAK 128
            LVVKLIS K
Sbjct: 121 SLVVKLISTK 126

[Close]

BLAST of Chy1G019050 vs. NCBI nr
Match: XP_022953425.1 (uncharacterized protein LOC111455984 [Cucurbita moschata])

HSP 1 Score: 167 bits (424), Expect = 6.80e-51
Identity = 100/130 (76.92%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
           MAS+F+APPS+LNLTSR SLIH AVLPSSIA IQ+HSNA P  SFRYR N  GLELRQRS
Sbjct: 1   MASIFSAPPSRLNLTSRPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYR-NTKGLELRQRS 60

Query: 61  --IAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLL 120
             I AS S+DGNSIKEEN SSKASSD   AQGPPFLTILAG FV SL+LW+ SSA TSL+
Sbjct: 61  FSITASNSSDGNSIKEENGSSKASSD---AQGPPFLTILAGIFVFSLLLWMLSSAATSLI 120

Query: 121 GLVVKLISAK 128
           GLVVKLIS K
Sbjct: 121 GLVVKLISTK 126

[Close]

BLAST of Chy1G019050 vs. NCBI nr
Match: KAG6575660.1 (hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014210.1 hypothetical protein SDJN02_24385 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (419), Expect = 3.92e-50
Identity = 100/130 (76.92%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
           MAS+FAAPPS+LNLTSR SLIH AVLPSSIA IQ+HSNA P  SFRYR N  GLELRQRS
Sbjct: 1   MASIFAAPPSRLNLTSRPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYR-NTKGLELRQRS 60

Query: 61  --IAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLL 120
             I AS S+D NSIKEEN SSKASSD   AQGPPFLTILAG FV SL+LW+ SSA TSL+
Sbjct: 61  FSITASNSSDRNSIKEENGSSKASSD---AQGPPFLTILAGIFVFSLLLWMLSSAATSLI 120

Query: 121 GLVVKLISAK 128
           GLVVKLIS K
Sbjct: 121 GLVVKLISTK 126

[Close]

BLAST of Chy1G019050 vs. NCBI nr
Match: XP_022991945.1 (uncharacterized protein LOC111488436 [Cucurbita maxima])

HSP 1 Score: 160 bits (405), Expect = 5.14e-48
Identity = 97/128 (75.78%), Postives = 105/128 (82.03%), Query Frame = 0


Query: 1   MASVFAAPPSQLNLTSRRSLIHRAVLPSSIARIQFHSNASPFLSFRYRKNIIGLELRQRS 60
           MAS+FAAPPS+LNLTSR SLIH AVLPSSIA IQ+HSNA P  SFRYR N  GLEL  RS
Sbjct: 1   MASIFAAPPSRLNLTSRPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYR-NTKGLELSPRS 60

Query: 61  --IAASKSTDGNSIKEENSSSKASSDDAGAQGPPFLTILAGFFVLSLILWIFSSAVTSLL 120
             I AS S+DGNSI+EEN SSKASSD   AQGPPFLTILAG FV SL+LW+ SSA TSL+
Sbjct: 61  FSITASNSSDGNSIEEENGSSKASSD---AQGPPFLTILAGIFVFSLLLWMLSSAATSLI 120

Query: 121 GLVVKLIS 126
           GLVVKLIS
Sbjct: 121 GLVVKLIS 124

The following BLAST results are available for this feature:

BLAST of Chy1G019050 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G019050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9W1	1.6e-51	94.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429580 PE=4 SV=1	[more]
A0A6J1GPL5	6.1e-38	76.92	uncharacterized protein LOC111455984 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]
A0A6J1JUC2	9.7e-36	75.78	uncharacterized protein LOC111488436 OS=Cucurbita maxima OX=3661 GN=LOC111488436...	[more]
A0A5A7UVF6	4.2e-31	91.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1KVQ7	5.1e-29	67.18	uncharacterized protein LOC111498025 OS=Cucurbita maxima OX=3661 GN=LOC111498025...	[more]

BLAST of Chy1G019050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659472.1	7.12e-69	94.53	uncharacterized protein LOC101220885 [Cucumis sativus] >KGN45172.1 hypothetical ...	[more]
XP_038899532.1	4.79e-51	77.69	uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida]	[more]
XP_022953425.1	6.80e-51	76.92	uncharacterized protein LOC111455984 [Cucurbita moschata]	[more]
KAG6575660.1	3.92e-50	76.92	hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022991945.1	5.14e-48	75.78	uncharacterized protein LOC111488436 [Cucurbita maxima]	[more]

BLAST of Chy1G019050 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G019050.1	Chy1G019050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane