Chy1G016520 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G016520
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Cell division protein like
Location	chrH01: 22448910 .. 22450011 (-)
RNA-Seq Expression	Chy1G016520
Synteny	Chy1G016520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTTCATTTTCTCGACTCGGAAGTTCCATTCCCTTCTCCGGCCTGTTCAGGTAGTTCTCTCCAATCTAGTTTCTACAGCTTCCTACTATCGTTACTTGCTGGAATTCTATTGGAGGGTAAACAAATCTCAGTGTTTACAACAGTTTTATGTATATGTATATGTGTTTTGTAATTTTGATTCTGGTAGCTTTTTTACCCCCCCTTCTAGTGTTGACGGCTTTGTTGTTAGTTCTTTTGCCCGATATGAGCTAAATTCTTGATTGAAAATTTGTTGATGCATCGCTGCATTACAGTGTGTGTGTGTGTCTCTCTCTCTATATGTATTGAAGTTTGAAACTCTAATTTAGTTTTTATCAATTATTGGATGTGTTTTTGTTTATTCCCTCAATTGAGCTGAGGGATTAGAACATTTTGATTACTGGATTTACTCAATGTTTACTTGATATGTTTCTGGTTAATCGAATAAGCTGCGAGGGGTGTCTATCTTGTGGGAGAACCTTGTCTTCCAAGCTCTGAAGTGAGAGAAAATTGTGAGAGCGGTGTTAAAGAAGTAGCCTATTGGAAATTCTTAGTTTCTTAACTTGCATATATTTTAACTTTTAAGATGCTAATGGGGTCTTTTTAGAATTGTTCTGAATGTTTTTTAGTACACAATTGAGGGTGGGAGATTCAAACCTTTGATCTCATGGTCTAGAGTGCATTTCTTATGCCAATTGAATTAGGCTTATGTTGGTAGGATTGTTTTGAATATTGATGCGAGTGTGAAGTAACTTTCAACTCTTTCAGTAGAAAAGTGCACAATAACCTCAACTTTACCACTTACCTAATTGTTCTACGAATAGTTTTAAAAACACAAGCATTTTATTGTTGTTTTAGAACAACTCATAATGTTTTCCCTTCCTCGTATAGACAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTCTGGGAATTATTGAACACAAGTTTTCTGCTGAGGAGATGCGCCGGGCACAGTCCACTGTTCGGGAAGCAGTTAATAATTGGCGACGGAATACAATTATTGAAAAACAAAGCAGTATTTCAAGTAACCATAGCTAG

mRNA sequence

ATGGCAATTTCATTTTCTCGACTCGGAAGTTCCATTCCCTTCTCCGGCCTGTTCAGACAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTCTGGGAATTATTGAACACAAGTTTTCTGCTGAGGAGATGCGCCGGGCACAGTCCACTGTTCGGGAAGCAGTTAATAATTGGCGACGGAATACAATTATTGAAAAACAAAGCAGTATTTCAAGTAACCATAGCTAG

Coding sequence (CDS)

ATGGCAATTTCATTTTCTCGACTCGGAAGTTCCATTCCCTTCTCCGGCCTGTTCAGACAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTCTGGGAATTATTGAACACAAGTTTTCTGCTGAGGAGATGCGCCGGGCACAGTCCACTGTTCGGGAAGCAGTTAATAATTGGCGACGGAATACAATTATTGAAAAACAAAGCAGTATTTCAAGTAACCATAGCTAG

Protein sequence

MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAVNNWRRNTIIEKQSSISSNHS*

Homology

[Close]

BLAST of Chy1G016520 vs. ExPASy TrEMBL
Match: A0A0A0K7N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394630 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.7e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV
Sbjct: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 61 NNWRRNTIIEKQSSISSNHS 81
          NNWRRNTIIEKQSSISSNHS
Sbjct: 61 NNWRRNTIIEKQSSISSNHS 80

[Close]

BLAST of Chy1G016520 vs. ExPASy TrEMBL
Match: A0A1S3BRC3 (uncharacterized protein LOC103492858 OS=Cucumis melo OX=3656 GN=LOC103492858 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.7e-34
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          MAISFSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV
Sbjct: 1  MAISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 61 NNWRRNTIIEKQSSISSNHS 81
          NNWRRNT+IEKQS ISSNHS
Sbjct: 61 NNWRRNTLIEKQSCISSNHS 80

[Close]

BLAST of Chy1G016520 vs. ExPASy TrEMBL
Match: A0A6J1D4Y2 (uncharacterized protein LOC111017642 OS=Momordica charantia OX=3673 GN=LOC111017642 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-29
Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          M IS SRLG+SIPFSG FRQLEQEM TVIRVLQPGPLGIIEHKFSAEEMR+AQSTVREAV
Sbjct: 1  MPISLSRLGNSIPFSGTFRQLEQEMXTVIRVLQPGPLGIIEHKFSAEEMRQAQSTVREAV 60

Query: 61 NNWRRNTIIEKQSSISSNH 80
          NNW RNT IEKQSSISS+H
Sbjct: 61 NNWXRNTSIEKQSSISSSH 79

[Close]

BLAST of Chy1G016520 vs. ExPASy TrEMBL
Match: A0A6J1H9I7 (uncharacterized protein LOC111460845 OS=Cucurbita moschata OX=3662 GN=LOC111460845 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.5e-29
Identity = 68/74 (91.89%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 5  FSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAVNNWR 64
          FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+R+AQ+TVREAVNNWR
Sbjct: 5  FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAVNNWR 64

Query: 65 RNTIIEKQSSISSN 79
          RNT IEKQSS+SSN
Sbjct: 65 RNTSIEKQSSMSSN 78

[Close]

BLAST of Chy1G016520 vs. ExPASy TrEMBL
Match: A0A6J1KSW4 (uncharacterized protein LOC111497926 OS=Cucurbita maxima OX=3661 GN=LOC111497926 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          M + FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+R AQ+TVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRWAQATVREAV 60

Query: 61 NNWRRNTIIEKQSSI 76
          NNWRRNT IEKQSS+
Sbjct: 61 NNWRRNTCIEKQSSM 75

[Close]

BLAST of Chy1G016520 vs. NCBI nr
Match: XP_011659338.1 (uncharacterized protein LOC101214859 [Cucumis sativus] >KGN44894.1 hypothetical protein Csa_015958 [Cucumis sativus])

HSP 1 Score: 155 bits (392), Expect = 1.78e-47
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV
Sbjct: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 61 NNWRRNTIIEKQSSISSNHS 80
          NNWRRNTIIEKQSSISSNHS
Sbjct: 61 NNWRRNTIIEKQSSISSNHS 80

[Close]

BLAST of Chy1G016520 vs. NCBI nr
Match: XP_008451625.1 (PREDICTED: uncharacterized protein LOC103492858 [Cucumis melo])

HSP 1 Score: 151 bits (382), Expect = 5.97e-46
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          MAISFSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV
Sbjct: 1  MAISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 61 NNWRRNTIIEKQSSISSNHS 80
          NNWRRNT+IEKQS ISSNHS
Sbjct: 61 NNWRRNTLIEKQSCISSNHS 80

[Close]

BLAST of Chy1G016520 vs. NCBI nr
Match: KAG6593168.1 (hypothetical protein SDJN03_12644, partial [Cucurbita argyrosperma subsp. sororia] >KAG6593174.1 hypothetical protein SDJN03_12650, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025565.1 hypothetical protein SDJN02_12061, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (351), Expect = 3.21e-41
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          M + FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 60

Query: 61 NNWRRNTIIEKQSSISSN 78
          NNWRRNT IEKQSS+SSN
Sbjct: 61 NNWRRNTSIEKQSSVSSN 78

[Close]

BLAST of Chy1G016520 vs. NCBI nr
Match: XP_023513754.1 (uncharacterized protein LOC111778268 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139 bits (349), Expect = 6.48e-41
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          M + FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 60

Query: 61 NNWRRNTIIEKQSSISSN 78
          NNWRRNT IEKQSS+SSN
Sbjct: 61 NNWRRNTSIEKQSSMSSN 78

[Close]

BLAST of Chy1G016520 vs. NCBI nr
Match: XP_038876733.1 (uncharacterized protein LOC120069118 [Benincasa hispida])

HSP 1 Score: 136 bits (342), Expect = 6.95e-40
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60
          M ISFSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMR+AQSTVREAV
Sbjct: 1  MPISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRQAQSTVREAV 60

Query: 61 NNWRRNTIIEKQS 73
          NNWRRNT IEKQS
Sbjct: 61 NNWRRNTSIEKQS 73

[Close]

BLAST of Chy1G016520 vs. TAIR 10
Match: AT3G62920.1 (unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 3.0e-19
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 3  ISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAVNN 62
          +S  R+  ++PFSG+ RQLE+E ETVI VLQPGPLGIIEHKFSA+E+R A++TV  AV++
Sbjct: 1  MSIYRIARALPFSGILRQLEKEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDS 60

Query: 63 WRRNTIIEKQSSISSNH 80
          WRR++ +E  + +  ++
Sbjct: 61 WRRHSEVEHANGLLKDY 77

The following BLAST results are available for this feature:

BLAST of Chy1G016520 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G016520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7N1	6.7e-35	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394630 PE=4 SV=1	[more]
A0A1S3BRC3	9.7e-34	96.25	uncharacterized protein LOC103492858 OS=Cucumis melo OX=3656 GN=LOC103492858 PE=...	[more]
A0A6J1D4Y2	3.2e-29	88.61	uncharacterized protein LOC111017642 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1H9I7	5.5e-29	91.89	uncharacterized protein LOC111460845 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A6J1KSW4	1.0e-27	88.00	uncharacterized protein LOC111497926 OS=Cucurbita maxima OX=3661 GN=LOC111497926...	[more]

BLAST of Chy1G016520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659338.1	1.78e-47	100.00	uncharacterized protein LOC101214859 [Cucumis sativus] >KGN44894.1 hypothetical ...	[more]
XP_008451625.1	5.97e-46	96.25	PREDICTED: uncharacterized protein LOC103492858 [Cucumis melo]	[more]
KAG6593168.1	3.21e-41	89.74	hypothetical protein SDJN03_12644, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023513754.1	6.48e-41	89.74	uncharacterized protein LOC111778268 [Cucurbita pepo subsp. pepo]	[more]
XP_038876733.1	6.95e-40	94.52	uncharacterized protein LOC120069118 [Benincasa hispida]	[more]

BLAST of Chy1G016520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62920.1	3.0e-19	54.55	unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37235	ZINC METALLOPROTEINASE AUREOLYSIN	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G016520.1	Chy1G016520.1	mRNA