Chy1G015890 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G015890
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH01: 21846636 .. 21847103 (+)
RNA-Seq Expression	Chy1G015890
Synteny	Chy1G015890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAACTCGCGAAATGGTTTTGGAGGGGTGGCTTGAAGTGTAGCGATTCAGAGTAGACTCTTAAATTTATTTTCTGGGATCGATTCACGTGGTTCCTCAGGATCGAAACAAATAACGAAAATCGATTCGATAACCGAGGAGCTACGTGGCTTCTACAAGACTGAGAAAATGGTTGGAGAATGTGACGAAATTGAATGTGAAGTGTTTGTTTTGCTACTTTGCTTGCTGCTTATGCTACTGATTTTGGTGCCTTTGTGTTTCGTGTTAAAAAATTAATTTTAATGGTTTTGGATGAAGGAGGGCCGGAAAAGAGAGAGCGTCGATTTGATGTCGCCGGTGATGAGGGACCGCCGCCGCCACCGATTCGTTCAAAAGAGACGGCGGTATCGGTCGTCGTCACTTGGGCCTAAACCAACGGTTTCATTTGTCTCGCTTTCTTACAAGCTGCCGAGGAAATCGCTTTCTAA

mRNA sequence

ATTGAACTCGCGAAATGGTTTTGGAGGGGTGGCTTGAAGTGTAGCGATTCAGAGTAGACTCTTAAATTTATTTTCTGGGATCGATTCACGTGGTTCCTCAGGATCGAAACAAATAACGAAAATCGATTCGATAACCGAGGAGCTACGTGGCTTCTACAAGACTGAGAAAATGGAGGGCCGGAAAAGAGAGAGCGTCGATTTGATGTCGCCGGTGATGAGGGACCGCCGCCGCCACCGATTCGTTCAAAAGAGACGGCGGTATCGGTCGTCGTCACTTGGGCCTAAACCAACGGTTTCATTTGTCTCGCTTTCTTACAAGCTGCCGAGGAAATCGCTTTCTAA

Coding sequence (CDS)

ATTGAACTCGCGAAATGGTTTTGGAGGGGTGGCTTGAAGTGTAGCGATTCAGAGTAGACTCTTAAATTTATTTTCTGGGATCGATTCACGTGGTTCCTCAGGATCGAAACAAATAACGAAAATCGATTCGATAACCGAGGAGCTACGTGGCTTCTACAAGACTGAGAAAATGGAGGGCCGGAAAAGAGAGAGCGTCGATTTGATGTCGCCGGTGATGAGGGACCGCCGCCGCCACCGATTCGTTCAAAAGAGACGGCGGTATCGGTCGTCGTCACTTGGGCCTAAACCAACGGTTTCATTTGTCTCGCTTTCTTACAAGCTGCCGAGGAAATCGCTTTCTAA

Protein sequence

IELAKWFWRGGLKCSDSE*TLKFIFWDRFTWFLRIETNNENRFDNRGATWLLQD*ENGGPEKRERRFDVAGDEGPPPPPIRSKETAVSVVVTWA*TNGFICLAFLQAAEEIAF*

Homology

The following BLAST results are available for this feature:

BLAST of Chy1G015890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G015890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G015890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G015890 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G015890.1	Chy1G015890.1	mRNA