Chy1G015820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G015820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pre-mRNA-splicing factor 18
Location	chrH01: 21770477 .. 21773749 (-)
RNA-Seq Expression	Chy1G015820
Synteny	Chy1G015820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACTGAAACTGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAGCTTCAGCCTCTACCACTTCCTCCTCCGTCGCAATCAACTCTACCACCACTACTTCGAAGTCCCTAACGGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACTGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAATTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAACCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTTAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTACAATTTATGTCCCTTTAGTTACGTAGTCGATTTGTTGAACGTTCAATTCTCTTGATGATTCTTCATCTTGACATACTTAGACTTCATGGTAGGTTCGAGAATAACCAGATTGTCTTTTTCTATGCAAGTTAGAGATGTTTAGAAGTAGCCCTTCCAAGTGGTTAAGAGAGTACTAAATGGAAGAGTTAAAAGTAGCTTAGAATTTACACCAATCTAAAGCCACAAGAATAAGAGAAGCCAAAAGATTGCTTAAGGACTTGCTTTTGTTGAATGTTATTATTCATCTCTAGCCACAGTAGTCAAAAGTGAGTTCTAGCAAATTCTGTATCCAAATTCCGAAGAACTTTCTCTCATTTTGAAACGATGACTATCAAGCATCCAAGGGAGTAGGTTGTTAATGTTAAAGGGGAGAACCACTTGGGACTAGAAGTTCATTTGCATGTAATTCGGCAGTTCCTCAGCCAACTGGCACATGAGGAAGAGGTGGCTTTTGGATTCGCGTCTTCCACTACTTGGGTCTTGAGCAGTGGCATCAATTTGGAAGTCTTTTTTCTTTTTTTTTTTGTTAGTCTTGGTGCTCTCATGAGAGAGCTCCTACAAGAAAACCTCAACTTCCTTTGCATATATTTTGAGTGGCATATCACCTTATCTTTGGAATTATTTGTCTACCATATCCTTGAATAGGAAGTTGGAAGGCGAAAAAAATGTATTTTTCAGACAGCCGAATTCACTTATTGGAAGAGCACAAGTAGAAGTTGGAGAGCAAGTATAGGAAAGAGACCCATTCTTTGTTTTCAGATCCCAAAAAAAAAACCCTCAAATCAGGGTCTTAGCTTCAAGTAGAGAGGTTCTAAATGTGTCTTGGATAGAATCAGTTTACCAATTGTAGATAGAGGATCTCCTTGGGAAAGCATTTGAAAATGAAGCTTGTAGGACCAATTCAAATGGACATTTTGATCCTATTGGAGTTCAAATCTTTTTAATTAACAATAGGTAAACGATTCAACAATCGCCAATAGAACATAGCTCAAGTGGCTATCAACCTCGACCTCTGAAGTTCAATACCATTCCCCCACCCCACATATTGAAAAAAAAAAGTAACCATTTGGCAATCACCTTTGGAAGTGTGGTAAGAAAATAGATACCGATAATAAACCATTACTTCATTTGTCAAGTCAGATTTCTTATGATTACAATCTTGGACTATGGCTACCCGTTTACTTTACGTAGTTGGTTGCTGGCTGTTTTGTTATTACCAGGGCTGCCGGCTGAATGCTTAACTTATGGCCTGATAGCCTCTTTAGTTAGACCCTTGGCTCTAGCCACCTGTGTGAAAGTAACTGCCCCTTCTTATTGCCACCCTATGAATCATATATTACAAGTTTACAACTATCTAAACCCATTGGTGTTAGTGGACCGTCCTTGTTAATTTCAATTGCACTATTTGACTTGCCAAGCTCCCCTTCACCTCTCCTAGGGATGGCTGTGGAATGTACATTACATTTTTTGTTTTCATATAATTGAATAAAGTGCTATTTTTTGTATTTTACCATGCAAGTGTCATTCTCGAACTTCCTTCTTTAAATCTACTATTATATACTTGTTCGTTCTTCCTTGTTTTATTTTTACTTGTTTATTGCAAACCGCCACATCAGTTGACAAATGTTATGTATGAGACAAACATATACTTAAGTAGAAGTTTTTTGTTTTTAATTATTTATCTGAGGCTAGGTTCTTCGGGATAAAAATTCTGGCATGTATCATGTTTGTATGGAATGAATTATTGCATTGTGGTGTTCTTAAGATTCAATTATCTTTTATGTTTACTGCTCTTTGTGGCTTGCAGCCTTGCAATGTCCTTAGATATAAATGTATAACTTGACATTTGTGAGTGCTGAGAAATAAGAGAACCGTGATGCAAGTTTGCTGAAATCAATTGATTATCTTCCAAGATTTTCTTTTTTAGCAGATAATTTTCATTAACGTATTATTATAATTTTCTTTTAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACATTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCGGAAGATAGCTAG

mRNA sequence

ATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACTGAAACTGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAGCTTCAGCCTCTACCACTTCCTCCTCCGTCGCAATCAACTCTACCACCACTACTTCGAAGTCCCTAACGGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACTGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAATTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAACCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTTAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACATTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCGGAAGATAGCTAG

Coding sequence (CDS)

ATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACTGAAACTGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAGCTTCAGCCTCTACCACTTCCTCCTCCGTCGCAATCAACTCTACCACCACTACTTCGAAGTCCCTAACGGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACTGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAATTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAACCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTTAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACATTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCGGAAGATAGCTAG

Protein sequence

MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS*

Homology

[Close]

BLAST of Chy1G015820 vs. ExPASy Swiss-Prot
Match: Q99633 (Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-45
Identity = 133/387 (34.37%), Postives = 205/387 (52.97%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Chy1G015820 vs. ExPASy Swiss-Prot
Match: Q8BM39 (Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-45
Identity = 133/387 (34.37%), Postives = 205/387 (52.97%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELARKEEEAYYERCGYKIQPKEDDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Chy1G015820 vs. ExPASy Swiss-Prot
Match: Q5RE03 (Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=9601 GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.2e-45
Identity = 133/387 (34.37%), Postives = 204/387 (52.71%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+    ++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYRIQPKEEDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Chy1G015820 vs. ExPASy Swiss-Prot
Match: Q2HJ41 (Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.2e-45
Identity = 132/387 (34.11%), Postives = 205/387 (52.97%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKDEDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    ++  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNELV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Chy1G015820 vs. ExPASy Swiss-Prot
Match: Q9JKB8 (Pre-mRNA-splicing factor 18 OS=Rattus norvegicus OX=10116 GN=Prpf18 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.2e-45
Identity = 132/387 (34.11%), Postives = 205/387 (52.97%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKVQPKEDDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +P+ LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPMRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNSREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Chy1G015820 vs. ExPASy TrEMBL
Match: A0A0A0K7C9 (Pre-mRNA-splicing factor 18 OS=Cucumis sativus OX=3659 GN=Csa_7G388420 PE=3 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.4e-221
Identity = 418/420 (99.52%), Postives = 418/420 (99.52%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEAVSTSSKSNPLASASTTSSSVA NSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. ExPASy TrEMBL
Match: A0A5D3DRE9 (Pre-mRNA-splicing factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001610 PE=3 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 7.1e-221
Identity = 416/420 (99.05%), Postives = 418/420 (99.52%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSNPLASASTTSSSVAI+STTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. ExPASy TrEMBL
Match: A0A1S3BS26 (Pre-mRNA-splicing factor 18 OS=Cucumis melo OX=3656 GN=LOC103492665 PE=3 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.7e-220
Identity = 415/420 (98.81%), Postives = 417/420 (99.29%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSNPLASASTTSSSVAI+STTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGG DEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGPDEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. ExPASy TrEMBL
Match: A0A6J1GQ96 (Pre-mRNA-splicing factor 18 OS=Cucurbita moschata OX=3662 GN=LOC111456490 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 6.5e-214
Identity = 404/420 (96.19%), Postives = 410/420 (97.62%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQS+TS+  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSSTSSPN 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA S SSKSN LASASTTSSS AINST TTSKSLTDEQNIDNLVL RQEVIRRLRFLKQ
Sbjct: 61  AEATSASSKSNSLASASTTSSSAAINSTATTSKSLTDEQNIDNLVLTRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADE+SADGGSSGV+ DKDLKR+KANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEDSADGGSSGVDADKDLKRIKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGK GSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKQGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. ExPASy TrEMBL
Match: A0A6J1JZG6 (Pre-mRNA-splicing factor 18 OS=Cucurbita maxima OX=3661 GN=LOC111488824 PE=3 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.9e-213
Identity = 402/420 (95.71%), Postives = 409/420 (97.38%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQS+TS+  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSSTSSPN 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA S SSKSN LASAS TSSS AINST TTSKS+TDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEATSASSKSNSLASASATSSSAAINSTATTSKSVTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADE+SADGGSSG + DKDLKR+KANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEDSADGGSSGADADKDLKRIKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGK GSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKQGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. NCBI nr
Match: XP_004146980.1 (pre-mRNA-splicing factor 18 [Cucumis sativus] >KGN44809.1 hypothetical protein Csa_015983 [Cucumis sativus])

HSP 1 Score: 776 bits (2005), Expect = 3.99e-282
Identity = 418/420 (99.52%), Postives = 418/420 (99.52%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEAVSTSSKSNPLASASTTSSSVA NSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. NCBI nr
Match: KAA0064068.1 (pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa] >TYK26227.1 pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa])

HSP 1 Score: 774 bits (1999), Expect = 3.28e-281
Identity = 416/420 (99.05%), Postives = 418/420 (99.52%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSNPLASASTTSSSVAI+STTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. NCBI nr
Match: XP_008451349.1 (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo])

HSP 1 Score: 772 bits (1994), Expect = 1.90e-280
Identity = 415/420 (98.81%), Postives = 417/420 (99.29%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSNPLASASTTSSSVAI+STTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGG DEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGPDEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. NCBI nr
Match: XP_038897671.1 (pre-mRNA-splicing factor 18 [Benincasa hispida] >XP_038897672.1 pre-mRNA-splicing factor 18 [Benincasa hispida])

HSP 1 Score: 761 bits (1966), Expect = 3.50e-276
Identity = 409/420 (97.38%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQSTTSA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSNPLASASTTSSSVAINST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEATSTSSKSNPLASASTTSSSVAINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PIT+FGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITIFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGV+ DKDL RMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLNRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGK GSDERLRIMPA +DS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKPGSDERLRIMPASDDS 420

[Close]

BLAST of Chy1G015820 vs. NCBI nr
Match: XP_023549183.1 (pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549184.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549185.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 753 bits (1944), Expect = 7.87e-273
Identity = 404/420 (96.19%), Postives = 411/420 (97.86%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQS+T++  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSSTTSPN 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA S SSKSN LASASTTSSS AINST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEATSASSKSNSLASASTTSSSAAINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADE+SADGGSSGV+ DKDLKR+KANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEDSADGGSSGVDADKDLKRIKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGK GSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKQGSDERLRIMPAPEDS 420

[Close]

BLAST of Chy1G015820 vs. TAIR 10
Match: AT1G03140.1 (splicing factor Prp18 family protein )

HSP 1 Score: 538.5 bits (1386), Expect = 4.8e-153
Identity = 293/424 (69.10%), Postives = 355/424 (83.73%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLL++E+LKKR++LA E+GGK+ FKRSEIEQ++IQ+LRE+E+RE E KA R++  +A+ 
Sbjct: 1   MDLLREEILKKRKSLAEESGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASG 60

Query: 61  AEAVSTSSK--SNPLASASTTSSSVAINSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
            +  S+ S   S+  A+++++ SS +  +    SK+LTDE    NL+LPRQEVIRRLRFL
Sbjct: 61  GDGKSSGSAPGSSNAATSASSKSSASDAAAIADSKALTDE----NLILPRQEVIRRLRFL 120

Query: 121 KQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
           KQP+TLFGEDD +RLDRLK+VLK GLFEVDSD+TEGQTNDFLRDIAEL+KRQK+G++ +R
Sbjct: 121 KQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFLRDIAELKKRQKSGMMGDR 180

Query: 181 KRQKKEDGAGEEGDGGGADEESADGG-SSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
           KR+ +++   +EGD G   E+   GG SS V+ DKD+KR+KANF++LC+EDKILVF+K+L
Sbjct: 181 KRKSRDERGRDEGDRGETREDELSGGESSDVDADKDMKRLKANFEDLCDEDKILVFYKKL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L EW QELD M   E+RTAKGK MVATFKQCARYL PLF  CRKK LP DIRQAL+V+V 
Sbjct: 241 LIEWKQELDAMENTERRTAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVN 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
            C+KRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL
Sbjct: 301 HCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGK-LGSDERLRIMPA 420
           QS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER  GG +   S+ERLR+MP+
Sbjct: 361 QSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPS 420

[Close]

BLAST of Chy1G015820 vs. TAIR 10
Match: AT1G54590.1 (INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: splicing factor Prp18 family protein (TAIR:AT1G03140.1); Has 388 Blast hits to 388 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 132; Plants - 48; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). )

HSP 1 Score: 328.2 bits (840), Expect = 9.9e-90
Identity = 182/290 (62.76%), Postives = 225/290 (77.59%), Query Frame = 0


Query: 132 RLDRLKFVLKAGLF-EVDSDLTEGQTNDFLRDIAELRKRQK-TGILSERKRQKKEDGAGE 191
           RLDRLK+VLK GLF EVD+D+T+G+TNDFLRDI EL+KR++ +G++++RKR+   D    
Sbjct: 86  RLDRLKYVLKEGLFEEVDNDMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSND---- 145

Query: 192 EGDGGGADEESADGGSSGVETDKDLKRM-KANFDELCEEDKILVFFKRLLNEWNQELDEM 251
             +  GA++E             DLK + +ANF++LC+EDKILVF K+LL EW QEL+ M
Sbjct: 146 -DELIGAEKE-------------DLKLLEEANFEDLCDEDKILVFCKKLLLEWKQELEAM 205

Query: 252 PEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAM 311
              E+RTA GK M+ATF QCARYL PLF  CR K LP DIRQ L+V+V C +KRDYL A 
Sbjct: 206 ENTERRTAIGKQMLATFNQCARYLTPLFHLCRNKCLPADIRQGLMVMVNCWIKRDYLDAT 265

Query: 312 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFC 371
            Q+IK+AIGNAPWPIGVTMVGIHERSAREKI T +SVAHIMN+ETTRKYLQS+KRLMTFC
Sbjct: 266 AQFIKLAIGNAPWPIGVTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVKRLMTFC 325

Query: 372 QRRYPTMPSKAVEFNSLANGSDLQSLLAEER-VSGGGKLGSDERLRIMPA 417
           QRRY  +PSK++EFNSLANGS+L SLLAEER  +   +  S+ERL +MP+
Sbjct: 326 QRRYSALPSKSIEFNSLANGSNLHSLLAEERFFAADRERVSEERLWLMPS 357

The following BLAST results are available for this feature:

BLAST of Chy1G015820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99633	2.5e-45	34.37	Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1	[more]
Q8BM39	2.5e-45	34.37	Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1	[more]
Q5RE03	3.2e-45	34.37	Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=9601 GN=PRPF18 PE=2 SV=1	[more]
Q2HJ41	7.2e-45	34.11	Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1	[more]
Q9JKB8	7.2e-45	34.11	Pre-mRNA-splicing factor 18 OS=Rattus norvegicus OX=10116 GN=Prpf18 PE=2 SV=1	[more]

BLAST of Chy1G015820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7C9	1.4e-221	99.52	Pre-mRNA-splicing factor 18 OS=Cucumis sativus OX=3659 GN=Csa_7G388420 PE=3 SV=1	[more]
A0A5D3DRE9	7.1e-221	99.05	Pre-mRNA-splicing factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BS26	2.7e-220	98.81	Pre-mRNA-splicing factor 18 OS=Cucumis melo OX=3656 GN=LOC103492665 PE=3 SV=1	[more]
A0A6J1GQ96	6.5e-214	96.19	Pre-mRNA-splicing factor 18 OS=Cucurbita moschata OX=3662 GN=LOC111456490 PE=3 S...	[more]
A0A6J1JZG6	1.9e-213	95.71	Pre-mRNA-splicing factor 18 OS=Cucurbita maxima OX=3661 GN=LOC111488824 PE=3 SV=...	[more]

BLAST of Chy1G015820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146980.1	3.99e-282	99.52	pre-mRNA-splicing factor 18 [Cucumis sativus] >KGN44809.1 hypothetical protein C...	[more]
KAA0064068.1	3.28e-281	99.05	pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa] >TYK26227.1 pre-mRNA-spli...	[more]
XP_008451349.1	1.90e-280	98.81	PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]	[more]
XP_038897671.1	3.50e-276	97.38	pre-mRNA-splicing factor 18 [Benincasa hispida] >XP_038897672.1 pre-mRNA-splicin...	[more]
XP_023549183.1	7.87e-273	96.19	pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549184.1 pr...	[more]

BLAST of Chy1G015820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03140.1	4.8e-153	69.10	splicing factor Prp18 family protein	[more]
AT1G54590.1	9.9e-90	62.76	INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro D...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 106..157 e-value: 1.8E-21 score: 87.3
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 111..137 e-value: 1.2E-11 score: 43.9
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 77..154 e-value: 7.5E-16 score: 59.4
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 100..141
None	No IPR available	GENE3D	1.20.940.10	Functional domain of the splicing factor Prp18	coord: 203..375 e-value: 3.7E-59 score: 201.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..420
None	No IPR available	PANTHER	PTHR13007:SF22	BNAA09G50970D PROTEIN	coord: 1..416
None	No IPR available	SUPERFAMILY	47938	Functional domain of the splicing factor Prp18	coord: 207..373
IPR004098	Prp18	PFAM	PF02840	Prp18	coord: 232..373 e-value: 1.7E-62 score: 209.7
IPR039979	Pre-mRNA-splicing factor 18	PANTHER	PTHR13007	PRE-MRNA SPLICING FACTOR-RELATED	coord: 1..416

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G015820.1	Chy1G015820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000350	generation of catalytic spliceosome for second transesterification step
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071021	U2-type post-spliceosomal complex
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
cellular_component	GO:0005682	U5 snRNP
cellular_component	GO:0005681	spliceosomal complex