Chy1G014990 (gene) Cucumber (hystrix) v1

Overview
NameChy1G014990
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRING-type E3 ubiquitin transferase
LocationchrH01: 20703156 .. 20710030 (-)
RNA-Seq ExpressionChy1G014990
SyntenyChy1G014990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGAGGCACTTTCCAATCCCACTCCCTATCCTCCTCTGCTTCTAACTCCAATGTCGTCACTTCACAAGACTTTGCGACGATGACAGAGCCTTCACCTCTACCGTCTCGGCTCCAGTTTTCACCGCCTTTACTTGACTCGTAGTTGAAGGATCAAGCAGTGATAGAAACATGCCAAGGTTTTACATTGACAATGCTCCTAGCTTGGATATTTTTTCCATCGTCACACACTTCATAAGTCTATGCTATTTCCACTTTTTCACTACCCTCCACGTCTTTGGTAAGCTTTTTTGCTTGTGATTCGCCGTTGGAGTTCAATCTGATGCTCATTTCATACAAAGTGCTTTTTTCCTTCTCGATCTTTTCATTCCCTAGATGGAATGTTCAAGTTTCTACTGACCTGATGACTTAACACTTTGTTTTGGTTTTCTCTCTAAATTTCACAGTCGTTGTAGTCTTTTGAGGTTTGAATTCCATTAGTTTCGGACGTATCAAAAGGAAGAGAGCTTTCTTCTGCTGGTATTTTCTCTTTACTTTGTATATTTCAGAAGATTGTAATGACCACACTTATCCAGAAGATATTCTAATGATCTTGTTGTTTCTGAGGTACTTTAATTTCTTTTTTCTTCCTTTTACTAACTCTCTTTTGCTGCTGGTTGTGTGAAACTTAATCCTTTTAATATATTGTTTGTGTTTAAAGTCCAAATTGGCAAATTGTATAGTTCTTGATTTCTATTTCTAACAAAATTTTGTGTGTGCATGAGGGTGTGTGGTCTACAATCTAGCCATTAACAATAGTTGTTCTTACTAGTATGTTTCGAAATGTTGATGCTGGTGGATGGGTTATTCCATGACGAAAAATTAACACATTAGAGATGAAGGAGAGACTCTATGAAGTGAACATTTGATTCATTGGGGATTTTCTTGGAAATTTGTTGTTCCACTGCTTTGGAGGATGCTTTTTAGGCTATTTGGAAAATAGAACTCGAAAACTTTAGCCTTAACTTAGGCCTTCTTTGGACTAACTATTTTCTACAAGGTTCATAAATAAAGTCACATCCTCGAATTATTGCCTGTGCAAAAATTGATTAGTGGGTTTATTTCATACACTTATTCATTACACATTTGTTGGGAAGTTCTGGGGAAAGCCACTTAATATCCTTGATTTGTTGGGATGTACTTTTAAATGTTGATGATGTCACTAATAATGAATGACAGTGCATTAATACTTTAGTAGTATAGTAAAGTTTTCCGTTTGTGACTTTTAAGAGAGACTTTTTTCTAAACATTTTGTAACTTAAAATTCTTATATATATATATATATATTTTTTTTTTTAATTTTATTTAAATCCAATCGAAATGTGTTTTTGTGGACTCTCTTGACTATGGGGCTCTCTTATTTTTGTGTACAACTAATATTTTCAATGAAGAGTGTACTTCATGCTATATTTGTTTCGTAATATATGTATAACCTGCTATGGTTTTGTTATAACAGGGAATGAAATGAATAGTTTATGCTGCTAGTGAAAGGGATATGACCATCTTTGCAGCGGGAATGATCAAGGTAAATTTCCTCCCGTATTATTTTGATTTCTATTTCCAAGCTTTCCTTTAAACATGCTCATATTTAATTACTGAAAATACTCTATCATACTATTTGATGTTAATCAGTTAGTTGTATTGAAAGTAGAGACAAAGAACACACAACTTTACATGAAAACCCGAGTATCGAGAGAAAAACCACGATATTTGCTTCTTATTATTTTCTGTTGGAGAAGTTGAAAGTCCTACATTGGAAAAACCAAAACCAAGAAGACTCATACTTCATATAAGATAGATAGGTTACTTCTCTCATTGTCAAATGGTTTTGAGATGGAACCCCATACTATCAAATTTAATATGGTATCAGAGCAGGTGGTCCAGGGAGGTCCAATGTTTAAGCCTCGACATTTTCGTTTCCTCCCCAATTAAAATCGATTTTCACTTATTGGACCTTTCAAATAGAGTCGAGTAAGTCCAAATGGGTATTCGGTCCAAGATAGGTGAACCCAAAGGCACCATCTTGAGGGAGCATGTTGGAGAAGTTGAGAGTCCCACATTGTAAAAACCAAGGAGACTCATACTCCATATAAGATAGATGGATTACTCCTCTCATTGCCAATTAGTTTTGAGATAGAATCTCATACTATCAAATTTAACATTTTCTGATAATAAAAAAGGTACAAATGAGGAATATTTATATGCAACACGAGCTTAATAAAAAGAATAAAGAATTAGGGTAAGGAAAATCCAACTACCCATGGGCTTTCATGAAGGCCCTAGCCCACTATTTCTAACACTCCCCTCAAGTTAGGACGTAATATCAATGAGGCCTAACTTGCTAACACACAAATCAAAGTTTGGTATGAGAAGCCCTTTGGTGAGAACATCAGCAACCTGTTGGCTCGAAGAGATGTACGGAATGCATATGCTCCCACTATCAAGTATTTCTTTGATGAAATGCCGATCAATCTCAACATATTTAGTTCTATCATGTTGAGTTGGGTTGTTCGCAATACTAATAACGACTTTATTATCACAACAGAGCTTCAATGGAGTCTCACATTCTTGATGAAGATCATATAGGACTTTCTAGAGCCAAATTTCCTTGCATATTCCTAAACTCACAGCTCTATACGCTCCTGACTAAAACACTTTGCTTCTTACTCCTAACTATTTTTCAGGTGTCGTTTTCAAGTATCTCAAAATTCTTTTGACAGCTTCCATGTGTTCCTCCTAGGGAGCCTGCATAAACTGGTTGATAACACTCACAACAAAGAAAATATCAGGACGAGTATGGGATACGTAAATCAACTTACCCACACGACGCTGATATTGTTCTTTATCAACTGGAACTTGATCATCAGAGTTTCCTAGTTTACAGTTGAATTCAATAGGAGTGTTAGCAAGACGACATTCCAACATACCTGTCTCGATTGGCAAATCAATGGTGTATTTTCTCTGAGACACGAAGATGCATTCTTTTGATCTGGCCACCTCCATTCCAAAGAAATATTTTAGATTTCCCGAATCCTTGATTTCAAATGCATTACCCATTTTCTGTTTAAGTTTACTAATTTCAGCCTAATCATCTTCAGACAAAACAATGTCATCCACATAAACTATCAAAACTGCAATCTTCCCTGTCTTGGAAACTTTTGTTAGTAAAGTATGATCAGAGTGACCTTGACTGTACCCTTGGGACTTGACAAAGGTAGTGAATTTGTCAAACCATGCTCTGGGTGACTGTTTCAGACCATGTAAGGATTTTTGGAGTTTACAAACCTGCTAACCAAACTGTGCTTCAAAGCTAGACGGGGGGCTCATGTAGATGTCCTCTACTAGGTTTCCATTCAGAAAAGCATTCTTAACATCTAGCTGATATAGAGACCAATCTTTGTTTACAGCAACAGATAGAAGGACTATGACAGTATTCAACTTAGCAACGGGAGAATTTTTTTGAATAATCAACACCATAGGTCTGAGTAAACCCTTTTGCAACTAACCTTGTCTTGTGTCTGTCAAGTGTTCCATCTGCTTTGTCTTTGAGAGTGAACACCCATTTGCATCCATAGGCTTGTGTCCCTTGGGTAGAGCACAAATCTCCGAAGTGTTATTTTTTTCAAGAGCTTTCATCTCTTACATGATAGCATTTCTTCCATTCAGGACACTCTAAAGCAATGTGAATATTTTTCGGTACTGTGGTAGAGTCAAGGTTGGCAATAAAAGCTCTAAATTGCGGTGAGAAGGTGGTTGAACTTCCCCATGAGATGGTTCATAAGGATGCGTCGCCAGAAGCCAACATTTTGCGCTATAATTGTAGGTGTGATTTTCAAAAATGAAAAATATGAAGAATGTCTAGACTTGCTTCCAAGGTTTTCTGTTCAAGAGCGTTAACGTTGATAATATAACATTTATTGGTAGATTCATTAGGGGCCTAAGAAGCATGGCACGTACACGAATATGATAGGACACGACAATACGTCAATTTCTAAAATAATAGGACACAGACATGTTGGGATACACTATTTTTTAAAATTAATTTTTTATAATATATGTAAATTTGTTACAAAATACTACATGTTCTTCATTTCCTCAACAAAAAAAAGAAGAAAAATACTAAATGTTCTTCACTAAAAAAAAAGTATAAAATCTCATTGTGTCATTGTCAAGTTAATATTTAACCATTGTTGTTTGTAGGAGTACAAAACATATTATGCATATCCAACATTCAACCTATACTTAAGTTAGCAATTTAATGTAACAATAAAAAATGGAAAGTGATTTTCCATACCAAAAAAATATATGAAAAACTAATAAAAAACTATCCTCTAAAATCTCAATGACATAATCATCCTTATCAACACCGTCCTCATTAATAATTTCAGCCTCCAACTTTGGATCATCTAAAGATAAATTAGCTACTTCAAGCATGCTCACGTCTTCAAGCGAATTACAAGCATCTCCTACAATATCCTATGACTTGGTTTCTTCATTTGAATATTTTGGAGTTTTCTAGACAAAAGACGTAGGTTATTGTGGATAAATATCAAATCCTCTACACGTTTAGACGTCATTTTGTTCTTCCTAAAGGAGTTAATAAAAGAATATGTGATTTTCTTTCACAATATGAAGAAGATGATGGTTGTCCTAAAACTTTAAAAGCAATCTTTTGAAGCATCAGTGAGTTACCACCAACTTTCTCTTGCATTTGTATCTCTTGTATATATCTTGTATATATCTCTTGCATTTGATAAATATCCCATGAATTACCACCAATCTTTTGTAGCTCTTGCCCGTGTGTTTTTTCATTCTTTCTCTATGAAAGTCATCGTTTCTAATAAAGAGAAAGTGTTATAATTTTTTTAGGTGCGTCGGTCCTAAAAATATACAAAATTTCTGTTCAGTGTTTTGGGTCAATGCTGCAAGAAGAAACCGATCAATTTTTTCTTTTTTTTTTTCTCTGGTTGTTGAAGCCTCAGTGGGACAATAATAGGTGCATTTGAGTTCACGAGTTTAAGGAAATCCTTTATTCTGTGCTTTCCTTTTTGTAGTATAGCATTTTTGAAGTATAAATTATCTGGAGAGTTTTATCTATAACTTCTGTGTCTATGGTGGATAAATTTTGTTCCTCTTTCTTTCTGTTTGTATTTTTTTTCCTTAGACAATTTTTCTTCTAACAAAAAAGAACAAGATTTAGCCTAAAAAGAAAAAAAAAAAAAGGAAGAAAATTTTTATGGTTGGTACTCTCTTAACTAGTTATCTTTGAACTATTCATTGCAAGAATTTCCTTGCCCAATTCCTTTTGGAAGTTGAAGGAACTCAACATTTAATATAAGTTATAGCTGATATGCTGCCAATGAATCTATGATAAACTATAAAGCAAGTAGTTTCTATGTTCAATGTCCATCTCCATGTTTCATTTTTAGGATTACTGGTTATATTCTAAGAAGTGGATTAGATTACTTGACGATTTTGGTTGGTTTTACTAAAAAAATATATTCATGGTGTTATACACTCTTTTATTTCTTTTTTTCTCTTTAATATTTTTGTTTAACACTTACTATTTTGTGACCGTTAGTACTTACCTAATGGGTGGACTTGGGTAGTGAGAGCCATGTTTTGATGGTAATTGAAATCATGAAAAATCGCTGTCTTCTTTATTGTTGATATTATAATATTAATCAGAGTCTTGTTTCTATGAGGAGCTTATGTTCATGTTTTTTTTAACCAAGACATTGTGCTCATCTATTGCTAACTTAGTCATGTTTGCCTGAAATCAGGACAGATGGGAACAGCCTCTTCTAGTTTCATGCCACACTACAAAGCCTTTGCCTCTTCCAAAGAAATGCAGAAATCTCGTTGTTGTCTTATAACTTCTGAAAGTCGTCCTTGATGATGTCATTAGCCTCAAACTCTCTTCAGATGAGTTGTTTTATCGTGAACGTGAGTCACTGGATGCAGCTGTAAATGACGCTCGAGAATTCATCGAAAACTGGTGTCTGAAACAAGCATAATTTGCAGTGTGAGTTACCTTGAGAATCAGCCTTCTAATACTCCAGTTCTTTTTTCATCATCCACTGCATATGCTTCCGTGGTTGTAGAGTTAGCTGACGTTTTTTTTGTTTTTGCATGTTCTCATGGAATTAGCTGGCCGTTCTTTGTTGGTGGCTGTTAGATTTCAAGAGCTGAATGCTGTGACAAATTCAAAGCTCTTTCACAAGTGACCTGCGAGATTGTTTGGAAGTTGGCGGAGTCAGTATCATGCAGCTCGAGTTTAAATGTTGTTCAGGCATGTATAAATTTGAAAACGTTTAAAACACATTTTATTTTCGATTTTTTTTCCTTTTTTCTAAATAAACTGAGATGTTTGGAGTAGTAAACACTTAGCTCAAACTTTTTTTTCTCTTATTTTGAAATAAGTTTCTTGATTTTGATTCATCTTATGTCATAGTTTTCTGATTATTTGATAAGAATGATACATTTAATGAACTGTCCAGAAATGTCTTGAAGGTCTTAGCTGGATCTACAGAAGCGGCTCTAATTAGTCAAAGAAGCATTGGCTCAAACTCCGAACATCTTCTAAAACTGATCGAAGCACTTCATTTGACGTCAAATCAAGAACTTCTGAAAAAGACTATAGCTGTTGAAAAGGAGAGAATCGATGCTGAACGCAACAATGCGAAGGAGGAACTACATCATATCAACCAGATTGTGGATCTAATTATCCGTATACTAGATTGGATGGTTAGAAAGGACTACTTCCGTGGGATAAATGGTGTCTCGTTTCCTTCCTATTTCCACTGCCCAATTGTCATTGGAGCTGATTCTTGA

mRNA sequence

ATGACAAGAGGCACTTTCCAATCCCACTCCCTATCCTCCTCTGCTTCTAACTCCAATGTCGTCACTTCACAAGACTTTGCGACGATGACAGAGCCTTCACCTCTACCGTCTCGGCTCCAGTTTTCACCGCCTTTACTTGACTCAAATGTCTTGAAGGTCTTAGCTGGATCTACAGAAGCGGCTCTAATTAGTCAAAGAAGCATTGGCTCAAACTCCGAACATCTTCTAAAACTGATCGAAGCACTTCATTTGACGTCAAATCAAGAACTTCTGAAAAAGACTATAGCTGTTGAAAAGGAGAGAATCGATGCTGAACGCAACAATGCGAAGGAGGAACTACATCATATCAACCAGATTGTGGATCTAATTATCCGTATACTAGATTGGATGGTTAGAAAGGACTACTTCCGTGGGATAAATGGTGTCTCGTTTCCTTCCTATTTCCACTGCCCAATTGTCATTGGAGCTGATTCTTGA

Coding sequence (CDS)

ATGACAAGAGGCACTTTCCAATCCCACTCCCTATCCTCCTCTGCTTCTAACTCCAATGTCGTCACTTCACAAGACTTTGCGACGATGACAGAGCCTTCACCTCTACCGTCTCGGCTCCAGTTTTCACCGCCTTTACTTGACTCAAATGTCTTGAAGGTCTTAGCTGGATCTACAGAAGCGGCTCTAATTAGTCAAAGAAGCATTGGCTCAAACTCCGAACATCTTCTAAAACTGATCGAAGCACTTCATTTGACGTCAAATCAAGAACTTCTGAAAAAGACTATAGCTGTTGAAAAGGAGAGAATCGATGCTGAACGCAACAATGCGAAGGAGGAACTACATCATATCAACCAGATTGTGGATCTAATTATCCGTATACTAGATTGGATGGTTAGAAAGGACTACTTCCGTGGGATAAATGGTGTCTCGTTTCCTTCCTATTTCCACTGCCCAATTGTCATTGGAGCTGATTCTTGA

Protein sequence

MTRGTFQSHSLSSSASNSNVVTSQDFATMTEPSPLPSRLQFSPPLLDSNVLKVLAGSTEAALISQRSIGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEELHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPIVIGADS*
Homology
[Close]
BLAST of Chy1G014990 vs. ExPASy Swiss-Prot
Match: Q8GWV5 (U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 4.4e-11
Identity = 44/155 (28.39%), Postives = 82/155 (52.90%), Query Frame = 0 

Query: 4   GTFQSHSLSSSASNSNVVTSQDFATMTEPSPLPSRLQFSPPLLDSNVLKVLAGS----TE 63
           G FQ   L       ++  S+    +++ SP+ S +Q     +         G+     E
Sbjct: 92  GVFQCEVLLGKVQTCSLEISRILLQLSQSSPVTSSVQSVERCVQETESFKQEGTLMELME 151

Query: 64  AALISQRS--IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEELHHIN 123
            AL +Q+      ++ HL  +I+ L L SNQ+LLK++I VEKERI ++ + ++E++    
Sbjct: 152 NALRNQKDDITSLDNNHLESIIQMLGLISNQDLLKESITVEKERIRSQASKSEEDMEQTE 211

Query: 124 QIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           Q+++L++ I + M++ ++     G+S P YF CP+
Sbjct: 212 QLIELVLCIREHMLKTEFLEVAKGISIPPYFRCPL 246

[Close]
BLAST of Chy1G014990 vs. ExPASy TrEMBL
Match: A0A5D3C862 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00400 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.2e-37
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHLTSNQELLK+TIAVEKERI+AERNNAKEE
Sbjct: 145 ISDSIEEALISQRSGIGPNSEHLLKLIEALHLTSNQELLKETIAVEKERINAERNNAKEE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           LHHINQI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHHINQIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. ExPASy TrEMBL
Match: A0A1S3BS34 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492591 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.3e-37
Identity = 84/100 (84.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHLTSNQELLK+TIAVEKERI+AERNNAK+E
Sbjct: 145 ISDSIEEALISQRSGIGPNSEHLLKLIEALHLTSNQELLKETIAVEKERINAERNNAKKE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           LHHINQI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHHINQIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. ExPASy TrEMBL
Match: A0A0A0K726 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G374670 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 84/100 (84.00%), Postives = 90/100 (90.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHLTSNQELLK+TIAVEKERI+A RNNAKEE
Sbjct: 145 ISDSIEEALISQRSGIGPNSEHLLKLIEALHLTSNQELLKETIAVEKERINAARNNAKEE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           LHHINQI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHHINQIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. ExPASy TrEMBL
Match: A0A6J1GQL0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111456190 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.2e-33
Identity = 78/100 (78.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSE LLK+IEALHL SNQELLK+TIA+EKERIDAE N+AKEE
Sbjct: 145 ISESIEEALISQRSGIGPNSEQLLKIIEALHLLSNQELLKETIAIEKERIDAECNDAKEE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           LH INQI+DLIIR+ DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHRINQIMDLIIRMRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. ExPASy TrEMBL
Match: A0A6J1CR22 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111013444 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.2e-33
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 0 

Query: 59  EAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEELHHIN 118
           E ALISQR+ +G NSEHLLK++E+LHL SNQELLK+TIAVEKERI+AERNNA E+L HIN
Sbjct: 150 EEALISQRTGVGPNSEHLLKIVESLHLMSNQELLKETIAVEKERINAERNNATEDLDHIN 209

Query: 119 QIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           QI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 210 QIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. NCBI nr
Match: KAE8646287.1 (hypothetical protein Csa_016777 [Cucumis sativus])

HSP 1 Score: 196 bits (499), Expect = 1.25e-60
Identity = 130/222 (58.56%), Postives = 134/222 (60.36%), Query Frame = 0 

Query: 1   MTRGTFQSHSLSSSASNSNVVTSQDFATMTEPSPLPSRLQFSPPLLDS------------ 60
           M RGTFQSHSLSSSAS S+VVTSQDFA MTEPSPLPSRLQFSPPLLDS            
Sbjct: 1   MARGTFQSHSLSSSASVSDVVTSQDFAMMTEPSPLPSRLQFSPPLLDSLKAEMKSKNFSS 60

Query: 61  -----------------------NVLKV-----------------------------LAG 120
                                  N+L+                               A 
Sbjct: 61  RTVAKCVVELPHEMVHKDVSPEANILRYSCSLSGTIIGAFEFTSKCPEGLQSLKQERTAR 120

Query: 121 STEAALISQRSIGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEELHHI 158
           STEAALISQRSIG NSEHL    +ALHLTSNQELLKKTIAVEKERIDAE NNA EELHHI
Sbjct: 121 STEAALISQRSIGPNSEHL----QALHLTSNQELLKKTIAVEKERIDAESNNATEELHHI 180

[Close]
BLAST of Chy1G014990 vs. NCBI nr
Match: KAA0059624.1 (U-box domain-containing protein 3 [Cucumis melo var. makuwa] >TYK08157.1 U-box domain-containing protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (422), Expect = 1.15e-44
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHLTSNQELLK+TIAVEKERI+AERNNAKEE
Sbjct: 145 ISDSIEEALISQRSGIGPNSEHLLKLIEALHLTSNQELLKETIAVEKERINAERNNAKEE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 152
           LHHINQI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHHINQIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. NCBI nr
Match: XP_008451242.1 (PREDICTED: U-box domain-containing protein 3 [Cucumis melo] >XP_008451243.1 PREDICTED: U-box domain-containing protein 3 [Cucumis melo])

HSP 1 Score: 165 bits (418), Expect = 4.17e-44
Identity = 84/100 (84.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHLTSNQELLK+TIAVEKERI+AERNNAK+E
Sbjct: 145 ISDSIEEALISQRSGIGPNSEHLLKLIEALHLTSNQELLKETIAVEKERINAERNNAKKE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 152
           LHHINQI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHHINQIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. NCBI nr
Match: XP_011659243.1 (U-box domain-containing protein 3 [Cucumis sativus] >XP_011659245.1 U-box domain-containing protein 3 [Cucumis sativus] >XP_031744297.1 U-box domain-containing protein 3 [Cucumis sativus] >KGN44724.1 hypothetical protein Csa_016381 [Cucumis sativus])

HSP 1 Score: 164 bits (416), Expect = 7.90e-44
Identity = 84/100 (84.00%), Postives = 90/100 (90.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHLTSNQELLK+TIAVEKERI+A RNNAKEE
Sbjct: 145 ISDSIEEALISQRSGIGPNSEHLLKLIEALHLTSNQELLKETIAVEKERINAARNNAKEE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 152
           LHHINQI+DLIIRI DWMVRKDYF GINGVS PSYF CP+
Sbjct: 205 LHHINQIMDLIIRIRDWMVRKDYFHGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. NCBI nr
Match: XP_038897885.1 (U-box domain-containing protein 3 isoform X3 [Benincasa hispida])

HSP 1 Score: 160 bits (404), Expect = 2.88e-42
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0 

Query: 54  LAGSTEAALISQRS-IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEE 113
           ++ S E ALISQRS IG NSEHLLKLIEALHL SNQELLK+TIA+EKERI+A  NNAKEE
Sbjct: 145 ISESIEEALISQRSGIGPNSEHLLKLIEALHLMSNQELLKETIAIEKERINAGHNNAKEE 204

Query: 114 LHHINQIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 152
           LHH+NQI+DLIIRI DWMVRKDYFRGINGVS PSYF CP+
Sbjct: 205 LHHMNQIMDLIIRIRDWMVRKDYFRGINGVSVPSYFRCPL 244

[Close]
BLAST of Chy1G014990 vs. TAIR 10
Match: AT3G54790.1 (ARM repeat superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 44/155 (28.39%), Postives = 82/155 (52.90%), Query Frame = 0 

Query: 4   GTFQSHSLSSSASNSNVVTSQDFATMTEPSPLPSRLQFSPPLLDSNVLKVLAGS----TE 63
           G FQ   L       ++  S+    +++ SP+ S +Q     +         G+     E
Sbjct: 92  GVFQCEVLLGKVQTCSLEISRILLQLSQSSPVTSSVQSVERCVQETESFKQEGTLMELME 151

Query: 64  AALISQRS--IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEELHHIN 123
            AL +Q+      ++ HL  +I+ L L SNQ+LLK++I VEKERI ++ + ++E++    
Sbjct: 152 NALRNQKDDITSLDNNHLESIIQMLGLISNQDLLKESITVEKERIRSQASKSEEDMEQTE 211

Query: 124 QIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           Q+++L++ I + M++ ++     G+S P YF CP+
Sbjct: 212 QLIELVLCIREHMLKTEFLEVAKGISIPPYFRCPL 246

[Close]
BLAST of Chy1G014990 vs. TAIR 10
Match: AT3G54790.2 (ARM repeat superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 44/155 (28.39%), Postives = 82/155 (52.90%), Query Frame = 0 

Query: 4   GTFQSHSLSSSASNSNVVTSQDFATMTEPSPLPSRLQFSPPLLDSNVLKVLAGS----TE 63
           G FQ   L       ++  S+    +++ SP+ S +Q     +         G+     E
Sbjct: 56  GVFQCEVLLGKVQTCSLEISRILLQLSQSSPVTSSVQSVERCVQETESFKQEGTLMELME 115

Query: 64  AALISQRS--IGSNSEHLLKLIEALHLTSNQELLKKTIAVEKERIDAERNNAKEELHHIN 123
            AL +Q+      ++ HL  +I+ L L SNQ+LLK++I VEKERI ++ + ++E++    
Sbjct: 116 NALRNQKDDITSLDNNHLESIIQMLGLISNQDLLKESITVEKERIRSQASKSEEDMEQTE 175

Query: 124 QIVDLIIRILDWMVRKDYFRGINGVSFPSYFHCPI 153
           Q+++L++ I + M++ ++     G+S P YF CP+
Sbjct: 176 QLIELVLCIREHMLKTEFLEVAKGISIPPYFRCPL 210

The following BLAST results are available for this feature:
BLAST of Chy1G014990 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GWV54.4e-1128.39U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 S... [more]
BLAST of Chy1G014990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C8622.2e-3785.00RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3BS346.3e-3784.00RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492591 PE=4 ... [more]
A0A0A0K7261.1e-3684.00RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G374670 PE... [more]
A0A6J1GQL04.2e-3378.00RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111456190... [more]
A0A6J1CR227.2e-3378.95RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101344... [more]
BLAST of Chy1G014990 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646287.11.25e-6058.56hypothetical protein Csa_016777 [Cucumis sativus][more]
KAA0059624.11.15e-4485.00U-box domain-containing protein 3 [Cucumis melo var. makuwa] >TYK08157.1 U-box d... [more]
XP_008451242.14.17e-4484.00PREDICTED: U-box domain-containing protein 3 [Cucumis melo] >XP_008451243.1 PRED... [more]
XP_011659243.17.90e-4484.00U-box domain-containing protein 3 [Cucumis sativus] >XP_011659245.1 U-box domain... [more]
XP_038897885.12.88e-4281.00U-box domain-containing protein 3 isoform X3 [Benincasa hispida][more]
BLAST of Chy1G014990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G54790.13.1e-1228.39ARM repeat superfamily protein [more]
AT3G54790.23.1e-1228.39ARM repeat superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR23315U BOX DOMAIN-CONTAININGcoord: 57..152
NoneNo IPR availablePANTHERPTHR23315:SF278U-BOX DOMAIN-CONTAINING PROTEIN 3coord: 57..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G014990.1Chy1G014990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0004842 ubiquitin-protein transferase activity