Chy1G013480 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGCTTTTTGGCAACATCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCATGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTTAGTTTTCATATTCTCTATAGTAAATACCTATTTCTTCTATGCTTTTTCTTACTTTCCACTTTGTCTTAAATCGATAAAATGGTGATATAATTAAATTTATCATATTTCATTAATTAGTTTATATTTCAAGTTAAACGATCATTTAATACGATATTAATTAGAGGATAAGAGTCATGTGTTTAAATCCATCTGATATCCCTTCTCTAATTAACATTATATTCACTCACAAGCAAGAGATGTGCAACAATTTAACTATATCCCATTACCATATAACTTTTGGGTAAATCAACATTTAACAAAATATTTCCTATTAACTTTGTCATTCAGAAAAAGGCTGAATGATTGTTATAGGTTTTTTTTTTTTCTCTCTTGAGGTAAATTGTATAACTTTGAGCATAGTTTTTTTTTTTTTTTTTTCACGATACGCAAATTCATAATGGAGAGAGTCTAATCACACATTGAGTAATTATCCAAAATTAGGTATAGGAACCAAACCATAATGCTAAATATTATTATTAATATTTATTTTAGTTTCGTTCAATACTATTATTTTTGTTAATTATGAGTTATATATATATAGGTTTTTAATGATAATAAAAAAAAGATTATTGGAAATGGAAAATGTATATAGGGAAGTTCACAGGTTAGTGCAGCAGCTGCTGATGAAGCTGCTCATGTTGTGAAGCGAACCACCGAGAGGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCCGCCGAGGAGGTAATTGTTTAAAATAACCAACTCTTTTCACATTTTTCATACTTAAAACTTATTTAACTTTTATATATATTTGTTTTGTTTCTTAAATAGACCCATTGGGATTGGTAGCTCTTCCAGGACTTCTAAAATTAAGTGTATAATAGGATAACTTTTTTTTAATTATGTATATATATTATATATATATTTTGCAAAATCTATACTCTATTATTCTTCCATTAATGATAGTCTTTATTCACTAATAGTAATCTACAATGCTATGGTCTTTTTCACCAGACTCTATGAGTACTTGAATCTAAATTTTGTTAAGGAAACGACGGATGAAAACACATTTTTTTTATGTAAACATTAATCAAGACCTTAGATTTAAATACTGAATGTTTCAATAATTTAATTATTATACTCTTGGATTTTTAATGATTTCTTGTTAATCAAATTTTAGTATGTAATGACTACTGCTCATTTAAGCTAAAACATATTTAATGGAGAGTACATACTACATAGACTAAATTACTTTGTAAACGAATCATGAAAAACTAATGTTGAAGATCAACAACTCATGTAACTATATGTTTTTTTGTTTTAATGATGGGTTGTTAACGAAAAATGTAGGTGACTCAAAAAACAAAAGAAGTAGCAGGGAAGGTGAGTGAAACAGCACAAGTTATGGCTGGGAAGGCAAAGCAAACAGTTGAAGATGCCTGGGGATCAGTGAAGGATACAACTCAAAACATTAAACAGAAAGTGGTTGGCAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAAAAATATCAAGTCTAACTGTTGA ATGGCAAGCTTTTTGGCAACATCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCATGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGGAAGTTCACAGGTTAGTGCAGCAGCTGCTGATGAAGCTGCTCATGTTGTGAAGCGAACCACCGAGAGGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCCGCCGAGGAGGTGACTCAAAAAACAAAAGAAGTAGCAGGGAAGGTGAGTGAAACAGCACAAGTTATGGCTGGGAAGGCAAAGCAAACAGTTGAAGATGCCTGGGGATCAGTGAAGGATACAACTCAAAACATTAAACAGAAAGTGGTTGGCAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAAAAATATCAAGTCTAACTGTTGA ATGGCAAGCTTTTTGGCAACATCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCATGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGGAAGTTCACAGGTTAGTGCAGCAGCTGCTGATGAAGCTGCTCATGTTGTGAAGCGAACCACCGAGAGGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCCGCCGAGGAGGTGACTCAAAAAACAAAAGAAGTAGCAGGGAAGGTGAGTGAAACAGCACAAGTTATGGCTGGGAAGGCAAAGCAAACAGTTGAAGATGCCTGGGGATCAGTGAAGGATACAACTCAAAACATTAAACAGAAAGTGGTTGGCAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAAAAATATCAAGTCTAACTGTTGA MASFLATSATLPKLQRAGSIIVHNPWSSKVFVSLRPRHGSSQVSAAAADEAAHVVKRTTERAAEEVKDKAVSAAEEVTQKTKEVAGKVSETAQVMAGKAKQTVEDAWGSVKDTTQNIKQKVVGKAEESKEAIKDTAENIKKNIKSNC* Homology
BLAST of Chy1G013480 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09 Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Chy1G013480 vs. ExPASy TrEMBL
Match: A0A0A0K9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.0e-65 Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Chy1G013480 vs. ExPASy TrEMBL
Match: A0A1S3C7D4 (uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 138/147 (93.88%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of Chy1G013480 vs. ExPASy TrEMBL
Match: A0A6J1DGG7 (uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.6e-50 Identity = 117/149 (78.52%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of Chy1G013480 vs. ExPASy TrEMBL
Match: A0A5C7I5X2 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010940 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.5e-27 Identity = 82/150 (54.67%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Chy1G013480 vs. ExPASy TrEMBL
Match: A0A5B7AK94 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_024954 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 6.1e-26 Identity = 79/162 (48.77%), Postives = 109/162 (67.28%), Query Frame = 0
BLAST of Chy1G013480 vs. NCBI nr
Match: XP_011659168.1 (uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical protein Csa_016428 [Cucumis sativus]) HSP 1 Score: 258 bits (659), Expect = 4.50e-86 Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Chy1G013480 vs. NCBI nr
Match: XP_008457975.1 (PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]) HSP 1 Score: 246 bits (627), Expect = 3.28e-81 Identity = 138/147 (93.88%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of Chy1G013480 vs. NCBI nr
Match: XP_038897424.1 (uncharacterized protein At4g13230 [Benincasa hispida]) HSP 1 Score: 223 bits (568), Expect = 3.33e-72 Identity = 123/147 (83.67%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of Chy1G013480 vs. NCBI nr
Match: XP_022152517.1 (uncharacterized protein At4g13230 [Momordica charantia]) HSP 1 Score: 207 bits (528), Expect = 4.40e-66 Identity = 117/149 (78.52%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of Chy1G013480 vs. NCBI nr
Match: TXG63946.1 (hypothetical protein EZV62_010940 [Acer yangbiense]) HSP 1 Score: 132 bits (331), Expect = 3.74e-36 Identity = 82/148 (55.41%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of Chy1G013480 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 64.3 bits (155), Expect = 9.3e-11 Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Chy1G013480 vs. TAIR 10
Match: AT1G04670.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04 Identity = 37/102 (36.27%), Postives = 51/102 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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