Chy1G012140 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G012140
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	CDT1-like protein b
Location	chrH01: 14406219 .. 14407077 (+)
RNA-Seq Expression	Chy1G012140
Synteny	Chy1G012140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCTGATGAAAATTCTTCTTTCTCAACAAACATGTTGGTCAGACGTCGACCCCGTTCGAGATCACTTGTATTTGACACTCCTACAAAGAAAGATAAGGACAATGATGAGACAGATGTTTCACTCAACGATGACATTCAAGATGTTTTATCTCCAAGCCTCATACAATCTGTATGATCTTTCCCTCTCTTATAAGCAACTTTCCCTTAGTTTATAGTAACTGATACTACCATTTGCAGTAAAAAAAATGACAATATACTAAGAATTTCTTGTGTTCTTGATTTGCAGATTAGAGAGAAAGAACAAAATATCAAAGAAGAGCAAATGCCGGCAATAACACAAGCTAAGAAACGACAGAAAATGATTGCTAACCTGTCAAAACTCTTCAATGCTATCTTTTTCTTGTAGCACAAGCGTACAATTATTAGAAAGCAAGAGCTAGTACACAAAATAATCGCTGGCATTGACAAAAGTAAGCAAAAATAAATACACTTGTTTTAAAAAGATTCCAATTTGTTTTAACTTGTCTAGAGCTGATTCATTTCTTTTGTTATACCCATAGGAGAAATTGAAGAGCAGCTAGATTTGTTGTTCGAACTTGCACCCGAATGGATCTCTCAAAAATCGACTTCCAGTGGTGATGTGTTAGTTTGGTTAGTTTTCGTTTCCTACACTCTTATATTACAAGTTCTGGAAAATCATCCATTAGATAATAAAACAAAAGAACTTAAGCAAAAACTTATGCCTCCATATAAAAAAGAATGTGCTACTTAAATCCTATTTGGTTTCATATTGCAGCATCAATAAATTGTCGAATGTCGAATCACTACGTGTTTGGCTTGAGGAAGCTAAGTGA

mRNA sequence

ATGACTCCTGATGAAAATTCTTCTTTCTCAACAAACATGTTGGTCAGACGTCGACCCCGTTCGAGATCACTTGTATTTGACACTCCTACAAAGAAAGATAAGGACAATGATGAGACAGATGTTTCACTCAACGATGACATTCAAGATGTTTTATCTCCAAGCCTCATACAATCTCACAAGCGTACAATTATTAGAAAGCAAGAGCTAGTACACAAAATAATCGCTGGCATTGACAAAAGAGAAATTGAAGAGCAGCTAGATTTGTTGTTCGAACTTGCACCCGAATGGATCTCTCAAAAATCGACTTCCAGTGGTGATGTGTTAGTTTGCATCAATAAATTGTCGAATGTCGAATCACTACGTGTTTGGCTTGAGGAAGCTAAGTGA

Coding sequence (CDS)

ATGACTCCTGATGAAAATTCTTCTTTCTCAACAAACATGTTGGTCAGACGTCGACCCCGTTCGAGATCACTTGTATTTGACACTCCTACAAAGAAAGATAAGGACAATGATGAGACAGATGTTTCACTCAACGATGACATTCAAGATGTTTTATCTCCAAGCCTCATACAATCTCACAAGCGTACAATTATTAGAAAGCAAGAGCTAGTACACAAAATAATCGCTGGCATTGACAAAAGAGAAATTGAAGAGCAGCTAGATTTGTTGTTCGAACTTGCACCCGAATGGATCTCTCAAAAATCGACTTCCAGTGGTGATGTGTTAGTTTGCATCAATAAATTGTCGAATGTCGAATCACTACGTGTTTGGCTTGAGGAAGCTAAGTGA

Protein sequence

MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQSHKRTIIRKQELVHKIIAGIDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK*

Homology

[Close]

BLAST of Chy1G012140 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-17
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 55  LIQSHKRTIIRKQELVHKIIAG----IDKREIEEQLDLLFELAPEWISQKSTSSGDVLVC 114
           LIQS +R +I K+ELVHKIIAG     D++E+EEQL LL E+ PEW+S+K +SSGDVLVC
Sbjct: 485 LIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVC 544

Query: 115 INKLSNVESLRVWLEE 127
           INKL++  ++R  LEE
Sbjct: 545 INKLASPLTIRSRLEE 560

[Close]

BLAST of Chy1G012140 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-14
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 55  LIQSHKRTIIRKQELVHKIIAG----IDKREIEEQLDLLFELAPEWISQKSTSSGDVLVC 114
           +  S  RT+I K+EL++KIIA      D+RE+EEQL L+ +L P+WIS+   SSGD+LV 
Sbjct: 401 VFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVR 460

Query: 115 INKLSNVESLRVWLEEA 128
           INK+S  E++R  LEEA
Sbjct: 461 INKMSTAETVRARLEEA 477

[Close]

BLAST of Chy1G012140 vs. ExPASy TrEMBL
Match: A0A5D3BZJ0 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00950 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43
Identity = 106/168 (63.10%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++ SFSTN LVRR PRSRSLVFDTPTK+ K+NDE DVSL +DI+DVLSPSL+QS  
Sbjct: 452 MTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIRDVLSPSLVQSIR 511

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IR+QEL HKIIA  DKR
Sbjct: 512 EKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKR 571

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 129
           EIEEQLDLLFELAPEWISQKSTSSGDVLVCIN+LSNVES+R  LEEAK
Sbjct: 572 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 619

[Close]

BLAST of Chy1G012140 vs. ExPASy TrEMBL
Match: A0A1S3CEP6 (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103500097 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 106/168 (63.10%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++ SFSTN LVRR PRSRSLVFDTPTK+ K+NDE DVSL +DI DVLSPSL+QS  
Sbjct: 452 MTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIR 511

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IR+QEL HKIIA  DKR
Sbjct: 512 EKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKR 571

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 129
           EIEEQLDLLFELAPEWISQKSTSSGDVLVCIN+LSNVES+R  LEEAK
Sbjct: 572 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 619

[Close]

BLAST of Chy1G012140 vs. ExPASy TrEMBL
Match: A0A5D3DKW1 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00410 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.2e-43
Identity = 105/168 (62.50%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++SSFSTN LVRR PRSRSLVFDTPTK+DK+NDETDVSL DDI DVLS SL+QS  
Sbjct: 456 MTPDDDSSFSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDVSLEDDILDVLSSSLVQSIK 515

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IRKQ+L+++IIAG DKR
Sbjct: 516 EKERKVKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGSDKR 575

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 129
           EIEEQLDLLFELAPEWI  K TS GDVLVCINKL+NVES+RV LEEAK
Sbjct: 576 EIEEQLDLLFELAPEWIYPKLTSGGDVLVCINKLANVESVRVRLEEAK 623

[Close]

BLAST of Chy1G012140 vs. ExPASy TrEMBL
Match: A0A5A7TNU2 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00640 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.2e-43
Identity = 105/168 (62.50%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++SSFSTN LVRR PRSRSLVFDTPTK+DK+NDETDVSL DDI DVLS SL+QS  
Sbjct: 456 MTPDDDSSFSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDVSLEDDILDVLSSSLVQSIK 515

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IRKQ+L+++IIAG DKR
Sbjct: 516 EKERKIKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGSDKR 575

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 129
           EIEEQLDLLFELAPEWI  K TS GDVLVCINKL+NVES+RV LEEAK
Sbjct: 576 EIEEQLDLLFELAPEWIYPKLTSGGDVLVCINKLTNVESVRVRLEEAK 623

[Close]

BLAST of Chy1G012140 vs. ExPASy TrEMBL
Match: A0A1S3C211 (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.2e-43
Identity = 105/168 (62.50%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++SSFSTN LVRR PRSRSLVFDTPTK+DK+NDETDVSL DDI DVLS SL+QS  
Sbjct: 456 MTPDDDSSFSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDVSLEDDILDVLSSSLVQSIK 515

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IRKQ+L+++IIAG DKR
Sbjct: 516 EKERKVKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGSDKR 575

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 129
           EIEEQLDLLFELAPEWI  K TS GDVLVCINKL+NVES+RV LEEAK
Sbjct: 576 EIEEQLDLLFELAPEWIYPKLTSGGDVLVCINKLANVESVRVRLEEAK 623

[Close]

BLAST of Chy1G012140 vs. NCBI nr
Match: KAA0051017.1 (CDT1-like protein b [Cucumis melo var. makuwa] >TYK04404.1 CDT1-like protein b [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (477), Expect = 1.17e-53
Identity = 106/168 (63.10%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++ SFSTN LVRR PRSRSLVFDTPTK+ K+NDE DVSL +DI+DVLSPSL+QS  
Sbjct: 452 MTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIRDVLSPSLVQSIR 511

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IR+QEL HKIIA  DKR
Sbjct: 512 EKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKR 571

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 128
           EIEEQLDLLFELAPEWISQKSTSSGDVLVCIN+LSNVES+R  LEEAK
Sbjct: 572 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 619

[Close]

BLAST of Chy1G012140 vs. NCBI nr
Match: XP_008461526.1 (PREDICTED: CDT1-like protein b [Cucumis melo])

HSP 1 Score: 187 bits (474), Expect = 3.19e-53
Identity = 106/168 (63.10%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++ SFSTN LVRR PRSRSLVFDTPTK+ K+NDE DVSL +DI DVLSPSL+QS  
Sbjct: 452 MTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIR 511

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IR+QEL HKIIA  DKR
Sbjct: 512 EKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKR 571

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 128
           EIEEQLDLLFELAPEWISQKSTSSGDVLVCIN+LSNVES+R  LEEAK
Sbjct: 572 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 619

[Close]

BLAST of Chy1G012140 vs. NCBI nr
Match: KAA0043447.1 (CDT1-like protein b [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (472), Expect = 6.59e-53
Identity = 105/168 (62.50%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++SSFSTN LVRR PRSRSLVFDTPTK+DK+NDETDVSL DDI DVLS SL+QS  
Sbjct: 456 MTPDDDSSFSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDVSLEDDILDVLSSSLVQSIK 515

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IRKQ+L+++IIAG DKR
Sbjct: 516 EKERKIKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGSDKR 575

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 128
           EIEEQLDLLFELAPEWI  K TS GDVLVCINKL+NVES+RV LEEAK
Sbjct: 576 EIEEQLDLLFELAPEWIYPKLTSGGDVLVCINKLTNVESVRVRLEEAK 623

[Close]

BLAST of Chy1G012140 vs. NCBI nr
Match: XP_008455861.1 (PREDICTED: CDT1-like protein b [Cucumis melo] >TYK24234.1 CDT1-like protein b [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (472), Expect = 6.59e-53
Identity = 105/168 (62.50%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++SSFSTN LVRR PRSRSLVFDTPTK+DK+NDETDVSL DDI DVLS SL+QS  
Sbjct: 456 MTPDDDSSFSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDVSLEDDILDVLSSSLVQSIK 515

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAGIDKR 120
                                                 HKRT+IRKQ+L+++IIAG DKR
Sbjct: 516 EKERKVKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGSDKR 575

Query: 121 EIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 128
           EIEEQLDLLFELAPEWI  K TS GDVLVCINKL+NVES+RV LEEAK
Sbjct: 576 EIEEQLDLLFELAPEWIYPKLTSGGDVLVCINKLANVESVRVRLEEAK 623

[Close]

BLAST of Chy1G012140 vs. NCBI nr
Match: XP_038887484.1 (CDT1-like protein b [Benincasa hispida])

HSP 1 Score: 178 bits (451), Expect = 7.55e-50
Identity = 99/172 (57.56%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 1   MTPDENSSFSTNMLVRRRPRSRSLVFDTPTKKDKDNDETDVSLNDDIQDVLSPSLIQS-- 60
           MTPD++SSFSTN LVRR PRSRSLVFDTPTK+D++ DETDVSL+DDI DVL+PSL+QS  
Sbjct: 456 MTPDDDSSFSTNKLVRRPPRSRSLVFDTPTKEDRNKDETDVSLDDDILDVLTPSLVQSIR 515

Query: 61  --------------------------------------HKRTIIRKQELVHKIIAG---- 120
                                                 HKRT+I ++EL++K+I G    
Sbjct: 516 EKERKIKEEQMPAITQAKRRQKMIANLPKLFNAIFFLFHKRTVITREELIYKVIVGSVDI 575

Query: 121 IDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINKLSNVESLRVWLEEAK 128
            D+REIEEQLDL+FEL PEWISQK  SSGDVLVCINKLSN ES+RV LEEAK
Sbjct: 576 TDRREIEEQLDLMFELVPEWISQKPASSGDVLVCINKLSNAESVRVRLEEAK 627

[Close]

BLAST of Chy1G012140 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A )

HSP 1 Score: 87.8 bits (216), Expect = 6.9e-18
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 55  LIQSHKRTIIRKQELVHKIIAG----IDKREIEEQLDLLFELAPEWISQKSTSSGDVLVC 114
           LIQS +R +I K+ELVHKIIAG     D++E+EEQL LL E+ PEW+S+K +SSGDVLVC
Sbjct: 485 LIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVC 544

Query: 115 INKLSNVESLRVWLEE 127
           INKL++  ++R  LEE
Sbjct: 545 INKLASPLTIRSRLEE 560

[Close]

BLAST of Chy1G012140 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B )

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 55  LIQSHKRTIIRKQELVHKIIAG----IDKREIEEQLDLLFELAPEWISQKSTSSGDVLVC 114
           +  S  RT+I K+EL++KIIA      D+RE+EEQL L+ +L P+WIS+   SSGD+LV 
Sbjct: 401 VFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVR 460

Query: 115 INKLSNVESLRVWLEEA 128
           INK+S  E++R  LEEA
Sbjct: 461 INKMSTAETVRARLEEA 477

The following BLAST results are available for this feature:

BLAST of Chy1G012140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW9	9.7e-17	60.53	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]
Q9M1S9	3.4e-14	51.95	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]

BLAST of Chy1G012140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZJ0	2.1e-43	63.10	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G...	[more]
A0A1S3CEP6	4.8e-43	63.10	CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103500097 PE=3 SV=1	[more]
A0A5D3DKW1	8.2e-43	62.50	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G0...	[more]
A0A5A7TNU2	8.2e-43	62.50	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639...	[more]
A0A1S3C211	8.2e-43	62.50	CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=3 SV=1	[more]

BLAST of Chy1G012140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051017.1	1.17e-53	63.10	CDT1-like protein b [Cucumis melo var. makuwa] >TYK04404.1 CDT1-like protein b [...	[more]
XP_008461526.1	3.19e-53	63.10	PREDICTED: CDT1-like protein b [Cucumis melo]	[more]
KAA0043447.1	6.59e-53	62.50	CDT1-like protein b [Cucumis melo var. makuwa]	[more]
XP_008455861.1	6.59e-53	62.50	PREDICTED: CDT1-like protein b [Cucumis melo] >TYK24234.1 CDT1-like protein b [C...	[more]
XP_038887484.1	7.55e-50	57.56	CDT1-like protein b [Benincasa hispida]	[more]

BLAST of Chy1G012140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31270.1	6.9e-18	60.53	homolog of yeast CDT1 A	[more]
AT3G54710.1	2.4e-15	51.95	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032054	DNA replication factor Cdt1, C-terminal	PFAM	PF16679	CDT1_C	coord: 43..102 e-value: 6.7E-7 score: 29.7
IPR038090	DNA replication factor Cdt1, C-terminal WH domain superfamily	GENE3D	1.10.10.1420		coord: 43..128 e-value: 5.6E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR28637:SF10	CDT1-LIKE PROTEIN B	coord: 55..127
None	No IPR available	PANTHER	PTHR28637	DNA REPLICATION FACTOR CDT1	coord: 55..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G012140.1	Chy1G012140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0050794	regulation of cellular process
molecular_function	GO:0005488	binding