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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. CCCGAAATCCAAGGAAGTGTAAGCAGTGAAAGCAAGCAAAAAAGGGAAACACATGACAAAAGTCCCCGATCGAGTCCACAGAATTCAACAAGAAGATGAAATTGAGTTCCCTTCAAAACCCTCGAACACAGGACGAAAGAAACAAAAGGAGGAAGTAACGCAATTTACCAAAAGAGAAAGGAGTGAAATCAAAGCAAAATAACGAGGTGGGTTAGTTTATTTTAGCTTCGAGGCTTCAAATTGGGAAAGTCCAAACAGTTTTCCGCAAAACTGAAAGCTGAAAATCGAAGATCTTAGAGAACCCAGTTGGAAAATGGAAGAAAATTGTGCGTGGTTGGGTTTGTAGGCTCGGTTTCCTGTTCGTGACTAACTGGTGGAACACCAGAGTTGCGTGTGTCACTATGGGATCCGGTTCGCCAAATCGGCGAGGTGTAGTGGGTAACTCAACCGTCGGCAAAGGAAGGACGGTGGTCGCGGGTGTTGGTAAGTGAGGGGGTGGCGATGTTTTAATGGGCGGAATGAAGTGGGGGGGGAGGTGATTGAAGGTTGAAGGTTGAAGGTTGAAGGTTGAGGAAGAACCAAAGTGCGATTGCAATT mRNA sequence CCCGAAATCCAAGGAAGTGTAAGCAGTGAAAGCAAGCAAAAAAGGGAAACACATGACAAAAGTCCCCGATCGAGTCCACAGAATTCAACAAGAAGATGAAATTGAGTTCCCTTCAAAACCCTCGAACACAGGACGAAAGAAACAAAAGGAGGAAGTAACGCAATTTACCAAAAGAGAAAGGAGTGAAATCAAAGCAAAATAACGAGGTGGGTTAGTTTATTTTAGCTTCGAGGCTTCAAATTGGGAAAGTCCAAACAGTTTTCCGCAAAACTGAAAGCTGAAAATCGAAGATCTTAGAGAACCCAGTTGGAAAATGGAAGAAAATTGTGCGTGGTTGGGTTTGTAGGCTCGGTTTCCTGTTCGTGACTAACTGGTGGAACACCAGAGTTGCGTGTGTCACTATGGGATCCGGTTCGCCAAATCGGCGAGGTGTAGTGGGTAACTCAACCGTCGGCAAAGGAAGGACGGTGGTCGCGGGTGTTGGTTGAAGGTTGAGGAAGAACCAAAGTGCGATTGCAATT Coding sequence (CDS) CCCGAAATCCAAGGAAGTGTAAGCAGTGAAAGCAAGCAAAAAAGGGAAACACATGACAAAAGTCCCCGATCGAGTCCACAGAATTCAACAAGAAGATGAAATTGAGTTCCCTTCAAAACCCTCGAACACAGGACGAAAGAAACAAAAGGAGGAAGTAACGCAATTTACCAAAAGAGAAAGGAGTGAAATCAAAGCAAAATAACGAGGTGGGTTAGTTTATTTTAGCTTCGAGGCTTCAAATTGGGAAAGTCCAAACAGTTTTCCGCAAAACTGAAAGCTGAAAATCGAAGATCTTAGAGAACCCAGTTGGAAAATGGAAGAAAATTGTGCGTGGTTGGGTTTGTAGGCTCGGTTTCCTGTTCGTGACTAACTGGTGGAACACCAGAGTTGCGTGTGTCACTATGGGATCCGGTTCGCCAAATCGGCGAGGTGTAGTGGGTAACTCAACCGTCGGCAAAGGAAGGACGGTGGTCGCGGGTGTTGGTTGAAGGTTGAGGAAGAACCAAAGTGCGATTGCAATT Protein sequence PEIQGSVSSESKQKRETHDKSPRSSPQNSTRR*N*VPFKTLEHRTKETKGGSNAIYQKRKE*NQSKITRWVSLF*LRGFKLGKSKQFSAKLKAENRRS*RTQLENGRKLCVVGFVGSVSCS*LTGGTPELRVSLWDPVRQIGEV*WVTQPSAKEGRWSRVLVEG*GRTKVRLQX
Homology
BLAST of Chy1G010800 vs. ExPASy TrEMBL
Match: A0A0A0LDY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G765080 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 0
Query: 1 PEIQGSVSSESKQKRETHDKSPRSSPQNSTRR 33
PEIQGSVSSESKQKRETH KSPRSSPQNS RR
Sbjct: 55 PEIQGSVSSESKQKRETHHKSPRSSPQNSRRR 86
BLAST of Chy1G010800 vs. NCBI nr
Match: KAE8645992.1 (hypothetical protein Csa_015471 [Cucumis sativus]) HSP 1 Score: 55.8 bits (133), Expect = 7.88e-07 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 0
Query: 1 PEIQGSVSSESKQKRETHDKSPRSSPQNSTRR 32
PEIQGSVSSESKQKRETH KSPRSSPQNS RR
Sbjct: 55 PEIQGSVSSESKQKRETHHKSPRSSPQNSRRR 86
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDY0 | 1.6e-04 | 93.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G765080 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8645992.1 | 7.88e-07 | 93.75 | hypothetical protein Csa_015471 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..57 |
Relationships
The following mRNA feature(s) are a part of this gene:
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