Chy1G009740 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G009740
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
Location	chrH01: 9901976 .. 9902884 (-)
RNA-Seq Expression	Chy1G009740
Synteny	Chy1G009740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATCTCTCTCAATGTTCTTCAACTTCAACCAAATCTAGCACGCCCCAAGTTCTTCCAAACAAACTCCGTCTCACCGACGCCTTATGTCAGACTTCCCCCGTGGTCCACCGCCGTCATGTCGCAGATCACTCCGTCGTACTGGGCCGCCATAAACGAAGATATCGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGGTGGCGGTGTATGAACCCTTGGGCCATTTCATCTTCTCTGCCCCACGAAACTCCGCTCCTGCACTTTGTATCGCCGCCTGCGAACTCGTCGGCGGTCACCGTAATCGGGCCATGGCGGCGGCTACTGCGATCCAACTCATCCACGCTGCAACGTGCACTCATGAATACCCTCCACTGACGGCGCGTGGAGAACGCGCCGCCGTTGTTGACCGTGTGTACGGATCCAACATCCAGTTGATGACTGGCGACGGAATAACTCCGATGGGGTTCGAGATTTTGGCGGAATCATGCGACTGGAGCGAGAGGGGATCGGAGCGGGTTCGACGAGTGATGGTGGAAGTGGCACGAGCGATGGGGACGGAGGGGTGGATTGGAGGGCAATTTAGGGGACTGGAGGAGGAGGAGGAGGCAACGGTGGAGGAAGTGATAGAGAAGACGGAAGGTGGGTTACACGCGTGTGGGGGCGCGTGTGGGGCGATAATGGGAGGTGGAAATGAAGAGGAAATAGAAAAGATGAGGAAATATGGAAAATTGGTGGGGATTGTTAAAGGATTAACACAAAATGTGTTTGGGGGGAAGGAAAATGAGAGAAAGAGAGAGAAAATTGAAGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGGATTCAATGGAGAAATGGTTCCTCAAATTTATGGCTTCCTTGATTTTGTGCGACTTTAG

mRNA sequence

ATGACGATCTCTCTCAATGTTCTTCAACTTCAACCAAATCTAGCACGCCCCAAGTTCTTCCAAACAAACTCCGTCTCACCGACGCCTTATGTCAGACTTCCCCCGTGGTCCACCGCCGTCATGTCGCAGATCACTCCGTCGTACTGGGCCGCCATAAACGAAGATATCGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGGTGGCGGTGTATGAACCCTTGGGCCATTTCATCTTCTCTGCCCCACGAAACTCCGCTCCTGCACTTTGTATCGCCGCCTGCGAACTCGTCGGCGGTCACCGTAATCGGGCCATGGCGGCGGCTACTGCGATCCAACTCATCCACGCTGCAACGTGCACTCATGAATACCCTCCACTGACGGCGCGTGGAGAACGCGCCGCCGTTGTTGACCGTGTGTACGGATCCAACATCCAGTTGATGACTGGCGACGGAATAACTCCGATGGGGTTCGAGATTTTGGCGGAATCATGCGACTGGAGCGAGAGGGGATCGGAGCGGGTTCGACGAGTGATGGTGGAAGTGGCACGAGCGATGGGGACGGAGGGGTGGATTGGAGGGCAATTTAGGGGACTGGAGGAGGAGGAGGAGGCAACGGTGGAGGAAGTGATAGAGAAGACGGAAGGTGGGTTACACGCGTGTGGGGGCGCGTGTGGGGCGATAATGGGAGGTGGAAATGAAGAGGAAATAGAAAAGATGAGGAAATATGGAAAATTGGTGGGGATTGTTAAAGGATTAACACAAAATGTGTTTGGGGGGAAGGAAAATGAGAGAAAGAGAGAGAAAATTGAAGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGGATTCAATGGAGAAATGGTTCCTCAAATTTATGGCTTCCTTGATTTTGTGCGACTTTAG

Coding sequence (CDS)

ATGACGATCTCTCTCAATGTTCTTCAACTTCAACCAAATCTAGCACGCCCCAAGTTCTTCCAAACAAACTCCGTCTCACCGACGCCTTATGTCAGACTTCCCCCGTGGTCCACCGCCGTCATGTCGCAGATCACTCCGTCGTACTGGGCCGCCATAAACGAAGATATCGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGGTGGCGGTGTATGAACCCTTGGGCCATTTCATCTTCTCTGCCCCACGAAACTCCGCTCCTGCACTTTGTATCGCCGCCTGCGAACTCGTCGGCGGTCACCGTAATCGGGCCATGGCGGCGGCTACTGCGATCCAACTCATCCACGCTGCAACGTGCACTCATGAATACCCTCCACTGACGGCGCGTGGAGAACGCGCCGCCGTTGTTGACCGTGTGTACGGATCCAACATCCAGTTGATGACTGGCGACGGAATAACTCCGATGGGGTTCGAGATTTTGGCGGAATCATGCGACTGGAGCGAGAGGGGATCGGAGCGGGTTCGACGAGTGATGGTGGAAGTGGCACGAGCGATGGGGACGGAGGGGTGGATTGGAGGGCAATTTAGGGGACTGGAGGAGGAGGAGGAGGCAACGGTGGAGGAAGTGATAGAGAAGACGGAAGGTGGGTTACACGCGTGTGGGGGCGCGTGTGGGGCGATAATGGGAGGTGGAAATGAAGAGGAAATAGAAAAGATGAGGAAATATGGAAAATTGGTGGGGATTGTTAAAGGATTAACACAAAATGTGTTTGGGGGGAAGGAAAATGAGAGAAAGAGAGAGAAAATTGAAGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGGATTCAATGGAGAAATGGTTCCTCAAATTTATGGCTTCCTTGATTTTGTGCGACTTTAG

Protein sequence

MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAATCTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL*

Homology

[Close]

BLAST of Chy1G009740 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-30
Identity = 79/271 (29.15%), Postives = 137/271 (50.55%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRNR 106
           +YW  +  +I   L   IP K P  +YE + + + +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 107 AMAAATAIQLIHAATCTHEYPPL-----TARGERAAVVDRVYGSNIQLMTGDGITPMGFE 166
           A   A A++++HAA+  H+  P        RG+ +     VYGS + ++ GD + P+ F+
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSN--HTVYGSGMAILAGDALFPLAFQ 168

Query: 167 ILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLH 226
            +             + R++ E+AR +G+ G   GQ+  L E     +  V EK  G + 
Sbjct: 169 HIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL-EGGPFPLSFVQEKKFGAMG 228

Query: 227 ACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNV-------FGGKENERKREKIEE 286
            C   CG ++GG  E+E++ +R+YG+ VG++  +  ++       + G   +   E  EE
Sbjct: 229 ECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEE 288

Query: 287 LKVLAFKELEGFN-----GEMVPQIYGFLDF 300
           LK  A KEL+ F+     G+ +  +Y F+D+
Sbjct: 289 LKEKAKKELQVFDNKYGGGDTLVPLYTFVDY 316

[Close]

BLAST of Chy1G009740 vs. ExPASy Swiss-Prot
Match: Q9LHR4 (Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g32040 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-25
Identity = 81/291 (27.84%), Postives = 138/291 (47.42%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRA 106
           SY     E +   L   +P +DP+A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAATAIQLIHAATCTHEYPPL-----TARGERAAVVDRVYGSNIQLMTGDGITPMGFEI 166
           M+AA A+++IH ++  H+  P        RG+      +V+G ++ ++ GD +  + FE 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGK--PTNHKVFGEHMAVLAGDALLALAFEH 187

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTE----- 226
           +           ER+ R + E+A+A+GT+G + GQ   L  +     +  +E+ E     
Sbjct: 188 MTVVSS-GLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLH 247

Query: 227 --GGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVFGGKEN---------- 286
               L       GAI+GGG EEEI+K+RKYG+ +G++  +  ++    E+          
Sbjct: 248 KTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGK 307

Query: 287 ---------------ERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 301
                          ER RE  E+L+  A ++L GF+   V  +     ++
Sbjct: 308 DVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYI 355

[Close]

BLAST of Chy1G009740 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 82/291 (28.18%), Postives = 139/291 (47.77%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRA 106
           SY       I   L   IP ++P  ++E + + + +  +   PALC+AACELVGG+ + A
Sbjct: 81  SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140

Query: 107 MAAATAIQLIHAATCTHEYPPL-----TARGERAAVVDRVYGSNIQLMTGDGITPMGFEI 166
           M AA A+++IH  +  H+  P        RG+    +  V+G ++ ++ GD +    FE 
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHI--VFGEDVAVLAGDALLAFAFEH 200

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTE----- 226
           +A S       S R+ R + E+A+A+G EG + GQ   +  E  + V+  +EK E     
Sbjct: 201 IAVST--LNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVD--LEKLEFIHIH 260

Query: 227 --GGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVF------------GGK 286
               L       GAI+GGG +EE+EK+RKY + +G++  +  ++              GK
Sbjct: 261 KTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGK 320

Query: 287 E-------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 301
           +              E+ RE  E+L   A ++L GF+ E    +    +++
Sbjct: 321 DLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYI 365

[Close]

BLAST of Chy1G009740 vs. ExPASy Swiss-Prot
Match: Q9LRR0 (Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g14510 PE=5 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-24
Identity = 70/228 (30.70%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 63  VIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAATCT 122
           ++P ++P+ V E + + + +  +   P LCIA CELVGG    AM+AA A+++IH ++  
Sbjct: 85  IVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLI 144

Query: 123 HEYPPLTARGE---RAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRV 182
           H+  P     +         +V+G ++ ++ GD +  + FE +          SER+ R 
Sbjct: 145 HDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSS-GLVASERMIRA 204

Query: 183 MVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTE-------GGLHACGGACGAIMGG 242
           +VE+ARA+GT+G + GQ   L  E     +  +E+ E         L       GAIMGG
Sbjct: 205 VVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGG 264

Query: 243 GNEEEIEKMRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFK 281
           G EEEIEK+RKY + +G++  +  ++    ++  +  K     V+A K
Sbjct: 265 GTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGK 311

[Close]

BLAST of Chy1G009740 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-24
Identity = 78/290 (26.90%), Postives = 139/290 (47.93%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRA 106
           SY     E +   L   +P ++P+ ++E + + + +  +   P LCIAACELVGG  + A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAATAIQLIHAATCTHEYPPLTARGE---RAAVVDRVYGSNIQLMTGDGITPMGFEILA 166
           M AA A+++IH  +  H+  P     +         +V+G ++ ++ GD +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 167 ESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEE----EEATVEEV----IEKT 226
            +         RV R + E+A+A+GTEG + GQ   +  E     +  +E +    + KT
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 227 EGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVF------------GGKE 286
              L A     GAI+GGG+++EIE++RK+ + +G++  +  ++              GK+
Sbjct: 258 AALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 317

Query: 287 -------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 301
                         E+ RE  E+L   A  +L GF+ + V  +    +++
Sbjct: 318 LIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366

[Close]

BLAST of Chy1G009740 vs. ExPASy TrEMBL
Match: A0A0A0K8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159
Identity = 285/302 (94.37%), Postives = 293/302 (97.02%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQPNLARPKFFQTNS+ P PYVRLPP S AVMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVIP KDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHR++AMAAATAIQLI+AAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 CTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTARG+RA+VVDRVYGSN+QLMTGDGITPMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTARGKRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240
           VEVARAMGTEGWIGGQFRGL  EEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK
Sbjct: 181 VEVARAMGTEGWIGGQFRGL--EEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240

Query: 241 MRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 300
           MRKYGKLVGIVKGLTQ VFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV
Sbjct: 241 MRKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 300

Query: 301 RL 303
           RL
Sbjct: 301 RL 300

[Close]

BLAST of Chy1G009740 vs. ExPASy TrEMBL
Match: A0A5A7SLD5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29549G00010 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.1e-149
Identity = 269/302 (89.07%), Postives = 281/302 (93.05%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQPNLARPKFFQTN V P PYVR PP ST  MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVIP KDP+AVYEPLGHFI SAPRNSA ALCIAACELVGGHR++AMAAATAIQLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  +IQLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240
           VEV+RAMGTEGWIGGQFRGL  +EEATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEK
Sbjct: 181 VEVSRAMGTEGWIGGQFRGL--DEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEK 240

Query: 241 MRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 300
           MRKYGKLVG+VKGLT+NVFGGKENE+KREKIEELKVLAFKELEGFNGEMV +IYGFLDFV
Sbjct: 241 MRKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFV 300

Query: 301 RL 303
            L
Sbjct: 301 GL 300

[Close]

BLAST of Chy1G009740 vs. ExPASy TrEMBL
Match: A0A1S4DWU7 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990910 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.8e-120
Identity = 223/269 (82.90%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQPNLARPKFFQTN V P PYVR PP ST  MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVIP KDP+AVYEPLGHFI SAPRNSA ALCIAACELVGGHR++AMAAATAIQLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  +IQLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240
           VEV+RAMGTEGWIGGQFRGL  +EEATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEK
Sbjct: 181 VEVSRAMGTEGWIGGQFRGL--DEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEK 240

Query: 241 MRKYGKLVGIVKGLTQNVFGGKENERKRE 270
           MRKYGKL+       +  +  +  ER++E
Sbjct: 241 MRKYGKLI------EERRWRNRRQERRKE 261

[Close]

BLAST of Chy1G009740 vs. ExPASy TrEMBL
Match: A0A6J1IK44 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111475905 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115
Identity = 220/301 (73.09%), Postives = 249/301 (82.72%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQL  N + PKF  +N + P  Y R P  +T VMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RR+I AKDP  VYEPLGHF+FSAPRNSA A+CIAACE VGGHR++AMAAATA+QLI+AAT
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 121 CTHEYPPLTARG-ERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
            T EYPPLTARG   AA+VDRVY  NIQL+TG GI P+GFEILA SCD SE GS+RVRRV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 181 MVEVARAMGTEGWIGGQFRGLEE-EEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEI 240
           M E+ARAMG+EGWIGGQF+ LEE    A  EEVIEKTEG LHA GGACGAI+G G+EEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 241 EKMRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLD 300
           EKMRKYG++VG+VKGL++ VFGGKENERKREKI+ELK LAFKELEGF GE V Q+  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

[Close]

BLAST of Chy1G009740 vs. ExPASy TrEMBL
Match: A0A2N9F8D7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 134/276 (48.55%), Postives = 192/276 (69.57%), Query Frame = 0


Query: 33  LPPWSTAVMSQITPSYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALC 92
           LP  S  +      SYWA++N +IE HL++ IP + P+ V+EP+ H +F+AP+N+APALC
Sbjct: 27  LPHRSMMITMSQNQSYWASVNSEIEAHLKQAIPLRPPLQVFEPMHHLVFAAPQNTAPALC 86

Query: 93  IAACELVGGHRNRAMAAATAIQLIHAATCTHEYPPLT--ARGERAAVVDRVYGSNIQLMT 152
           +AACELVGGHR++AMAAA+A+ L+HAA+ THE+ PLT   R +   V+   YG NI+L+ 
Sbjct: 87  LAACELVGGHRDQAMAAASALHLMHAASFTHEHLPLTDRPRPKSRPVIHHAYGPNIELLL 146

Query: 153 GDGITPMGFEILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLE------EE- 212
           GD I P GFE+LA S D ++  S+R+ RV +E+ RAMG++G + GQ+  LE      EE 
Sbjct: 147 GDAIIPFGFELLARSDDPAQNNSDRILRVTIEITRAMGSQGMVEGQYYELECPQSDGEEL 206

Query: 213 -EEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVFGGK 272
            +   +E+V +K EGGLHACG ACGAI+GGG+EEEIEK+R++G  VG+++G+      G+
Sbjct: 207 CDVGWIEQVCKKKEGGLHACGAACGAILGGGSEEEIEKLRRFGLYVGMIQGMLHG--AGR 266

Query: 273 ENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLD 299
           + +  +E +EEL+ LA KELE F G  V  I  F++
Sbjct: 267 KEKGLKEVVEELRNLALKELEEFKGRKVEAISSFVN 300

[Close]

BLAST of Chy1G009740 vs. NCBI nr
Match: XP_004139865.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis sativus] >KGN44166.1 hypothetical protein Csa_016347 [Cucumis sativus])

HSP 1 Score: 564 bits (1453), Expect = 5.21e-202
Identity = 285/302 (94.37%), Postives = 293/302 (97.02%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQPNLARPKFFQTNS+ P PYVRLPP S AVMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVIP KDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHR++AMAAATAIQLI+AAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 CTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTARG+RA+VVDRVYGSN+QLMTGDGITPMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTARGKRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240
           VEVARAMGTEGWIGGQFRGLEEE  ATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK
Sbjct: 181 VEVARAMGTEGWIGGQFRGLEEE--ATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240

Query: 241 MRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 300
           MRKYGKLVGIVKGLTQ VFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV
Sbjct: 241 MRKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 300

Query: 301 RL 302
           RL
Sbjct: 301 RL 300

[Close]

BLAST of Chy1G009740 vs. NCBI nr
Match: KAA0031902.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 530 bits (1366), Expect = 9.44e-189
Identity = 269/302 (89.07%), Postives = 281/302 (93.05%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQPNLARPKFFQTN V P PYVR PP ST  MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVIP KDP+AVYEPLGHFI SAPRNSA ALCIAACELVGGHR++AMAAATAIQLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  +IQLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240
           VEV+RAMGTEGWIGGQFRGL+EE  ATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEK
Sbjct: 181 VEVSRAMGTEGWIGGQFRGLDEE--ATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEK 240

Query: 241 MRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 300
           MRKYGKLVG+VKGLT+NVFGGKENE+KREKIEELKVLAFKELEGFNGEMV +IYGFLDFV
Sbjct: 241 MRKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFV 300

Query: 301 RL 302
            L
Sbjct: 301 GL 300

[Close]

BLAST of Chy1G009740 vs. NCBI nr
Match: XP_038896497.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 473 bits (1216), Expect = 6.90e-166
Identity = 244/303 (80.53%), Postives = 264/303 (87.13%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQ N ARPKF + N V P  Y R P  ST VMSQITPSYWA INEDIEDHL
Sbjct: 1   MAISLNLLQLQANPARPKFLKWNPVRPAVYFRAPARSTVVMSQITPSYWATINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           R+VIPAKDP AV+EPLGHFIFSAPRNSAPALCIAACELVGG R++AMAAATA+QLIHAAT
Sbjct: 61  RQVIPAKDPPAVFEPLGHFIFSAPRNSAPALCIAACELVGGRRDKAMAAATALQLIHAAT 120

Query: 121 CTHEYPPLTARG-ERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
            T EYPPLTAR   RAAVVDR+YG+NIQL+TGD I P+ FEILA SCDWSE GSERV+ V
Sbjct: 121 YTREYPPLTAREISRAAVVDRIYGANIQLLTGDAIAPIVFEILAGSCDWSESGSERVQHV 180

Query: 181 MVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIE 240
           MVE+ARAMGTEGW+GGQFRGLEEE  AT EEV EKTEGGLHACGGACGAI+GGG+EEEIE
Sbjct: 181 MVEMARAMGTEGWVGGQFRGLEEE--ATAEEVSEKTEGGLHACGGACGAILGGGSEEEIE 240

Query: 241 KMRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 300
           KMRKYGKLVG+VKGL++NVFGGKENERKREKIEE KVLAFK LEGF GE V +IYGFLDF
Sbjct: 241 KMRKYGKLVGMVKGLSKNVFGGKENERKREKIEEFKVLAFKVLEGFKGEKVHEIYGFLDF 300

Query: 301 VRL 302
             L
Sbjct: 301 EGL 301

[Close]

BLAST of Chy1G009740 vs. NCBI nr
Match: XP_016900454.1 (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis melo])

HSP 1 Score: 435 bits (1119), Expect = 9.57e-152
Identity = 220/248 (88.71%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQLQPNLARPKFFQTN V P PYVR PP ST  MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVIP KDP+AVYEPLGHFI SAPRNSA ALCIAACELVGGHR++AMAAATAIQLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  +IQLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEK 240
           VEV+RAMGTEGWIGGQFRGL+EE  ATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEK
Sbjct: 181 VEVSRAMGTEGWIGGQFRGLDEE--ATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEK 240

Query: 241 MRKYGKLV 248
           MRKYGKL+
Sbjct: 241 MRKYGKLI 246

[Close]

BLAST of Chy1G009740 vs. NCBI nr
Match: XP_023536167.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429 bits (1104), Expect = 7.70e-149
Identity = 227/303 (74.92%), Postives = 254/303 (83.83%), Query Frame = 0


Query: 1   MTISLNVLQLQPNLARPKFFQTNSVSPTPYVRLPPWSTAVMSQITPSYWAAINEDIEDHL 60
           M ISLN+LQL  N + PKF  +N + P  Y R P  +T VMSQITPSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 61  RRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAAT 120
           RRVI AKDP AVYEPLGHF+FSAPRNSA A+CIAACELVGGHR++AMAAATA+QLI+AAT
Sbjct: 61  RRVIIAKDPPAVYEPLGHFVFSAPRNSAAAMCIAACELVGGHRDQAMAAATALQLIYAAT 120

Query: 121 CTHEYPPLTARG-ERAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
            T EYPPLTARG   AAVVDRVYG NIQL+TG GI P+GFEILA SCD SE GSERVRRV
Sbjct: 121 YTREYPPLTARGISNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 181 MVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIE 240
           MVE+ARAMG+EGWIGGQF+ LEE   A  EEVIE TEG LHA GGACGAI+GGG+EEEIE
Sbjct: 181 MVEMARAMGSEGWIGGQFKELEEVTAA--EEVIEMTEGELHARGGACGAILGGGSEEEIE 240

Query: 241 KMRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 300
           KMRKYG++VG+VKGL++ VFGGKENERKREKI+ELK LAFKELEGF G+ V Q+  F DF
Sbjct: 241 KMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGQKVDQMCNFFDF 300

Query: 301 VRL 302
             L
Sbjct: 301 EGL 301

[Close]

BLAST of Chy1G009740 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-31
Identity = 79/271 (29.15%), Postives = 137/271 (50.55%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRNR 106
           +YW  +  +I   L   IP K P  +YE + + + +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 107 AMAAATAIQLIHAATCTHEYPPL-----TARGERAAVVDRVYGSNIQLMTGDGITPMGFE 166
           A   A A++++HAA+  H+  P        RG+ +     VYGS + ++ GD + P+ F+
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSN--HTVYGSGMAILAGDALFPLAFQ 168

Query: 167 ILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTEGGLH 226
            +             + R++ E+AR +G+ G   GQ+  L E     +  V EK  G + 
Sbjct: 169 HIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL-EGGPFPLSFVQEKKFGAMG 228

Query: 227 ACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNV-------FGGKENERKREKIEE 286
            C   CG ++GG  E+E++ +R+YG+ VG++  +  ++       + G   +   E  EE
Sbjct: 229 ECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEE 288

Query: 287 LKVLAFKELEGFN-----GEMVPQIYGFLDF 300
           LK  A KEL+ F+     G+ +  +Y F+D+
Sbjct: 289 LKEKAKKELQVFDNKYGGGDTLVPLYTFVDY 316

[Close]

BLAST of Chy1G009740 vs. TAIR 10
Match: AT3G32040.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-26
Identity = 81/291 (27.84%), Postives = 138/291 (47.42%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRA 106
           SY     E +   L   +P +DP+A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAATAIQLIHAATCTHEYPPL-----TARGERAAVVDRVYGSNIQLMTGDGITPMGFEI 166
           M+AA A+++IH ++  H+  P        RG+      +V+G ++ ++ GD +  + FE 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGK--PTNHKVFGEHMAVLAGDALLALAFEH 187

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTE----- 226
           +           ER+ R + E+A+A+GT+G + GQ   L  +     +  +E+ E     
Sbjct: 188 MTVVSS-GLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLH 247

Query: 227 --GGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVFGGKEN---------- 286
               L       GAI+GGG EEEI+K+RKYG+ +G++  +  ++    E+          
Sbjct: 248 KTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGK 307

Query: 287 ---------------ERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 301
                          ER RE  E+L+  A ++L GF+   V  +     ++
Sbjct: 308 DVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYI 355

[Close]

BLAST of Chy1G009740 vs. TAIR 10
Match: AT3G14510.1 (Polyprenyl synthetase family protein )

HSP 1 Score: 115.2 bits (287), Expect = 9.5e-26
Identity = 71/229 (31.00%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 62  RVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRAMAAATAIQLIHAATC 121
           R +P ++P+ V E + + + +  +   P LCIA CELVGG    AM+AA A+++IH ++ 
Sbjct: 7   RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66

Query: 122 THEYPPLTARGE---RAAVVDRVYGSNIQLMTGDGITPMGFEILAESCDWSERGSERVRR 181
            H+  P     +         +V+G ++ ++ GD +  + FE +          SER+ R
Sbjct: 67  IHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSS-GLVASERMIR 126

Query: 182 VMVEVARAMGTEGWIGGQFRGLEEEEEATVEEVIEKTE-------GGLHACGGACGAIMG 241
            +VE+ARA+GT+G + GQ   L  E     +  +E+ E         L       GAIMG
Sbjct: 127 AVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMG 186

Query: 242 GGNEEEIEKMRKYGKLVGIVKGLTQNVFGGKENERKREKIEELKVLAFK 281
           GG EEEIEK+RKY + +G++  +  ++    ++  +  K     V+A K
Sbjct: 187 GGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGK 234

[Close]

BLAST of Chy1G009740 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-25
Identity = 78/290 (26.90%), Postives = 139/290 (47.93%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRA 106
           SY     E +   L   +P ++P+ ++E + + + +  +   P LCIAACELVGG  + A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAATAIQLIHAATCTHEYPPLTARGE---RAAVVDRVYGSNIQLMTGDGITPMGFEILA 166
           M AA A+++IH  +  H+  P     +         +V+G ++ ++ GD +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 167 ESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEE----EEATVEEV----IEKT 226
            +         RV R + E+A+A+GTEG + GQ   +  E     +  +E +    + KT
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 227 EGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQNVF------------GGKE 286
              L A     GAI+GGG+++EIE++RK+ + +G++  +  ++              GK+
Sbjct: 258 AALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 317

Query: 287 -------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 301
                         E+ RE  E+L   A  +L GF+ + V  +    +++
Sbjct: 318 LIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366

[Close]

BLAST of Chy1G009740 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-25
Identity = 83/292 (28.42%), Postives = 142/292 (48.63%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRNRA 106
           SY     E +   L   +P ++P+ + E + + + +  +   P LCIAACELVGG    A
Sbjct: 65  SYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 124

Query: 107 MAAATAIQLIHAATCTHEYPPL-----TARGERAAVVDRVYGSNIQLMTGDGITPMGFEI 166
           M+AA A+++IH ++  H+  P        RG+      + +G ++ ++ GD +  + FE 
Sbjct: 125 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGK--PTNHKEFGEDMAVLAGDALLALAFEH 184

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEE----EEATVEEV----IE 226
           +    +      ER+ R ++E+A+A+GT+G + GQ   L  +    ++  +E +    + 
Sbjct: 185 MTFVSN-GLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLH 244

Query: 227 KTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIV------------------KGLT 286
           KT   L A     GAIMGGG EEEIEK+RKY + +G++                  K   
Sbjct: 245 KTAALLEA-AAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAG 304

Query: 287 QNVFGGKEN-------ERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 301
           ++V  GK         ER RE  E+L+  A ++L GF+ +    +     ++
Sbjct: 305 KDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYI 352

The following BLAST results are available for this feature:

BLAST of Chy1G009740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39108	2.1e-30	29.15	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
Q9LHR4	3.5e-25	27.84	Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q94ID7	1.3e-24	28.18	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q9LRR0	1.7e-24	30.70	Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic OS=Arabidopsis t...	[more]
P34802	2.3e-24	26.90	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]

BLAST of Chy1G009740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8P9	2.5e-159	94.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1	[more]
A0A5A7SLD5	3.1e-149	89.07	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel...	[more]
A0A1S4DWU7	1.8e-120	82.90	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A6J1IK44	1.0e-115	73.09	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A2N9F8D7	1.7e-67	48.55	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1	[more]

BLAST of Chy1G009740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139865.1	5.21e-202	94.37	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
KAA0031902.1	9.44e-189	89.07	heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ...	[more]
XP_038896497.1	6.90e-166	80.53	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_016900454.1	9.57e-152	88.71	PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch...	[more]
XP_023536167.1	7.70e-149	74.92	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of Chy1G009740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38460.1	1.5e-31	29.15	geranylgeranyl reductase	[more]
AT3G32040.1	2.5e-26	27.84	Terpenoid synthases superfamily protein	[more]
AT3G14510.1	9.5e-26	31.00	Polyprenyl synthetase family protein	[more]
AT4G36810.1	1.6e-25	26.90	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G29430.1	3.6e-25	28.42	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 41..301 e-value: 3.1E-46 score: 159.6
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 47..250
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 87..250 e-value: 1.9E-5 score: 23.9
None	No IPR available	PANTHER	PTHR43281:SF6	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKE	coord: 7..298
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 7..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G009740.1	Chy1G009740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0004659	prenyltransferase activity