Chy1G007180 (gene) Cucumber (hystrix) v1

Overview
NameChy1G007180
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH01: 5230219 .. 5230721 (+)
RNA-Seq ExpressionChy1G007180
SyntenyChy1G007180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAGAGTCTTTCCGTGTTCCAACTCTCAAAAGAGATTTCAAAATTTTGTATTTCTTTGTGTCTCATATTTCAAATCTTGAAACATATTACAACATGGGTTTCCGTCTACCTCGAATTGTTACTTCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAAAATCTCCAAAAACTATCGATGTTCCTAAGGGCTATTTTACAGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCTTTTCAAGATTTGTTGAGTCAATCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATTACAATTCCTTGCAGTGAAGACTGTTTCCTCGATGTCACTGAGAGGTTGAATGACTCATGAAGGAAAGAGATTAGTATCTAGAAATAGATAGTATATACAAGGATTAGAAAAGTGCAAAATGTAGACTGTATACATTTTTTGAAATGAAAACTTGATTCTTTGAAC

mRNA sequence

AACAAGAGTCTTTCCGTGTTCCAACTCTCAAAAGAGATTTCAAAATTTTGTATTTCTTTGTGTCTCATATTTCAAATCTTGAAACATATTACAACATGGGTTTCCGTCTACCTCGAATTGTTACTTCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAAAATCTCCAAAAACTATCGATGTTCCTAAGGGCTATTTTACAGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCTTTTCAAGATTTGTTGAGTCAATCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATTACAATTCCTTGCAGTGAAGACTGTTTCCTCGATGTCACTGAGAGGTTGAATGACTCATGAAGGAAAGAGATTAGTATCTAGAAATAGATAGTATATACAAGGATTAGAAAAGTGCAAAATGTAGACTGTATACATTTTTTGAAATGAAAACTTGATTCTTTGAAC

Coding sequence (CDS)

AACAAGAGTCTTTCCGTGTTCCAACTCTCAAAAGAGATTTCAAAATTTTGTATTTCTTTGTGTCTCATATTTCAAATCTTGAAACATATTACAACATGGGTTTCCGTCTACCTCGAATTGTTACTTCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAAAATCTCCAAAAACTATCGATGTTCCTAAGGGCTATTTTACAGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCTTTTCAAGATTTGTTGAGTCAATCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATTACAATTCCTTGCAGTGAAGACTGTTTCCTCGATGTCACTGAGAGGTTGAATGACTCATGAAGGAAAGAGATTAGTATCTAGAAATAGATAGTATATACAAGGATTAGAAAAGTGCAAAATGTAGACTGTATACATTTTTTGAAATGAAAACTTGATTCTTTGAAC

Protein sequence

NKSLSVFQLSKEISKFCISLCLIFQILKHITTWVSVYLELLLLSKVFSDLHQQEMENLQKLSMFLRAILQFMSVRNKRSVLSSHYLT*ISLLFKIC*VNQKKNLDTIIQWVALQFLAVKTVSSMSLRG*MTHEGKRLVSRNR*YIQGLEKCKM*TVYIF*NENLIL*X
Homology
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BLAST of Chy1G007180 vs. ExPASy TrEMBL
Match: A0A0A0K5T4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008970 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.4e-33
Identity = 82/87 (94.25%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 1  NKSLSVFQLSKEISKFCISLCLIFQILKHITTWVSVYLELLLLSKVFSDLHQQEMENLQK 60
          NKSLSVFQLSKEISKFCI LCLIFQI KHITTWVSV LELLLLSKVFSDLHQQEMENLQK
Sbjct: 8  NKSLSVFQLSKEISKFCIPLCLIFQIFKHITTWVSVCLELLLLSKVFSDLHQQEMENLQK 67

Query: 61 LSMFLRAILQFMSVRNKRSVLSSHYLT 88
          L MFLRAIL FMSVRNKRSVLSSHYLT
Sbjct: 68 LLMFLRAILPFMSVRNKRSVLSSHYLT 94

The following BLAST results are available for this feature:
BLAST of Chy1G007180 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G007180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5T43.4e-3394.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008970 PE=4 SV=1[more]
BLAST of Chy1G007180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Chy1G007180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G007180.1Chy1G007180.1mRNA