Chy1G006350 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGACAACGACGAGAGGCTGCAACGGATGGCTTCGGCTAACGGCAAGGCTACACCTGAACACCGGAACCAATCACTTTTTCAATGTTCAATTTGATGATGAAACCCTTTTTGATGTGATCATGAGACTGTAATACTAATGACTCCGTTGAAATAGTTATCAATGTGCATTTCAATGATATTTACACATCAAACAAACCTTTGAAATGGTTGATTGCAAACCTTAATTGGGCACCCATCCCTTCTAGCAGCGAGAATGCGTTGTGTCTTCGTTTCAATGAGATTGATGCTAAGTAACCCTTTTTTACCATTATTACAACAATTTCCAATAGTTTTACTAACTTCGTCACCTATTGGAATAAAATAACGTCAAAATTCAACAAAGTACAAACCATCTCAAGAATCAACGGCTGCCATTTGTTAATTTTTCTAATGATCTATGGTCAAGTTTGTGCGTTATCATAAAAGTCCCCTTAATTAATTTGCCCCTTCTTTTATGATTTTATATACTTTGTTCAATTCAATCCCGACATGTATGAATTTTAACCATTCCTACATTAGTCATTATTATTACAATAAAGTTAAAACAAATAAAGATAAGATTGTACCAATTCTATTGGCTTTGCATGTTGATTAATGCACATCATACCTAAGTTTTGACTATATCAAGATATTATGCTTCATTCATATTTACAATTTTTGTTTTTGTTTTTTTAAACGAACTTATTAATTAATTAATTAAAAACAGTATTTTATTAAAGTAAATTTGTAAATATAGTATATCATCAACGTCAAGATTCTGATTCTAATTATTTTCGTAACCTTATGTTGCTTATTGATTTTCTAAAAATTAAATTAGATAAACATGTGTTTTTCTTGTAGGAGCTGTACGAAAACTTGGACATTTTACATATGTCAATTTACATTAGCATAAAATGTAAATTTCTACTAATCATTATTTAATACATCTAGATCATATATCAATATTAAGAAAGGAATGACGTTATATTTTTATTCTTATATATATATAAGTTGAATTTAACATAATAGATTGCATCAAATATAACCTGCTTAACCTAGGACTTGATTTGGTTACCATTTTTTCCATTAAAAACTAAATATGCTAACTAATGGTTTCAAACCAATCCAATTTTAGTCTTATAGGGATTTTAAAATATACAATATACATTTAAATCAAATCCATATTGAAACTTGAATAACGAAAACTTCAAATAATCTTGCAAAACTAATGACATTGTTGTGTTGTTTGATGTATGTTGGTTCTATCATAAAAACCATTTCCCCTCATTTTAATTACAATCTTTAAAATTTCAAAGCATCCCATTGTTTTTCAATTCGATCTCAACCTAAGTTTGGTAATTCAAATTCCAAGGGCATTAAAAAATTCCTATAAAGTCAATCTTGGCACAACTCACCAATCTTTTTTACATTATAAAGAAGCTAGCAATTACAATATATATATAAGTACATTCATCATTTTCTTCTCTGTCACAATTCATAGTTGAGAATTAATTAATTTCTTCCAAAAATGGCTTGGTTCCTTAGCTTGTTCTTCTTCTTTCTTGTCTCTTTCACTAATGCTTGTGATCGTTGTATTCATCGGTCTAAAGCTACTCATTATTATGGAGATTCACCTACTTCATGTAAAATAGTTTTATTTTGAATTTCATTTTTATTTCCTAAATATTTTGATTCATATACTTAATGTTTGTGATAATATTCCGCAAATGAAAATGGTACCATATCTAATTTGTTTTTGGTATTATAATTTGATGTAGATGGAGGAGCATGTGGTTATGGAGACATGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTCCCCTCTCTCTACAAACAAGGAGCTGGTTGTGGAGCATGTTTTCAGGTAAATTTTCATGTTCAATTTGTAGATATATATGAAAATATTTAAATTTTAACTCTCAAAGTCTATCAATGAAACACTATATCTCACACTAAATAAAATTCTATTAATAATAGAAGTCTATTACTGATAAATCATATTGCAATTATATTACTGGTCTATCGATATTGTCGATACCGGCCTATCATTTATAGACCATATATAAGAGGCTATCAGCGATAGAAAGTCTATCTCGTTGATAGATTTTTCTACATTTGCATTTTATTAAACGTTGATGTACACTTGATTATTATCTATAAAATTGCTATCATATTCATTTAAAAACTTAATTTTGTTTTCAGAATTGGGATAATAACTTCAACTGCCTATTTAGGAACAAAATGAAAATTTAATTAAAAAGTTATGAAAAAAAGGCATAAATTTTAAAAACAAATGGAGCTATTAATTTTTGGGCCATTTTTAAAAATAACAAAATAAATTAAAATATTTACAAGCTATAGCAAAATTTTGGATTCTATCACTGATAGTCTTCTATGATTATAGCATATCAATGACTATCGGTGATAGAATTTGCTATAATTTGTAAATATTTTGTAAAATCTACTATTTTTAAAAATTCCCCTTAATTTTTCAATTTTCAAATATTTGTTCTTTAATTTTTGTGAGGTTTTTCTTTTCATTAAAATTTGTGAATTGTAAATGTATTAGTCGTTTTTGTAGGTAAGATGCAAAGACAAAAGACTATGCAATACAGCAGGGAGCAAAGTGGTATTGACGGATCAAAATTATGATAGCAGAGCAGATTTTGTTCTAAGTAGAAAAGCTTTTTCTGCTATGGCTTTAAAAGGAAAAGGTCAAGAGCTTTTGAATACTGGAATTGTGGATGTAGAATATAAGAGGTGATCAATTATACTTTTGTTACAAAAACTTTACCACTAACTATAACAATAATGTATATATTGATATAATATTGTGAGTGTTTAATTAATTTTCTGATATTATTGTAGGATACCTTGTGGATACAAAAACAAAAATTTGGCTGTACGAGTTGAAGAATCAAGTTATAATCCCAATTATTTAGCTGTTAAACTTTTGTACCAAGGTGGCCAAACAGAGATTGTGGCTGTCGAGATAGCTGAGGTAAAATCAAAATCACTATATATACCAGTAATTTTTTAAATGGTTAAAATTACTTTTAGATGTGATTTTATACCATATCAAAATTGATTTTGAATCATGATTTGGTTTGATTAATCCGTGTTTCTTATCAAAATTGTGAGGCCCTCCTTCATCACTCCGAAACGAAACCGAAAACTTGAGAGTAGAGAATACTGAAAGATGATTTGGTTATTATGACAGATTGGTTCATATGAATGGGTGAGCTTAAGAAGAAACTATGGAGCAGTCTGGGACACAAATAAAGTGCCAAAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGTCGATTGGAAAGTTGGAGCCATATACGATACAGGAGTTCAAATTTACGACATTGCTAAAGAAAGTTGCCCAACATCACAGTGTGGTGATAAACCATGGAAGTGA ATGGTGGACAACGACGAGAGGCTGCAACGGATGGCTTCGGCTAACGGCAAGGCTACACCTGAACACCGGAACCAATCACTTTTTCAATATGGAGGAGCATGTGGTTATGGAGACATGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTCCCCTCTCTCTACAAACAAGGAGCTGGTTGTGGAGCATGTTTTCAGGTAAGATGCAAAGACAAAAGACTATGCAATACAGCAGGGAGCAAAGTGGTATTGACGGATCAAAATTATGATAGCAGAGCAGATTTTGTTCTAAGTAGAAAAGCTTTTTCTGCTATGGCTTTAAAAGGAAAAGGTCAAGAGCTTTTGAATACTGGAATTGTGGATGTAGAATATAAGAGGATACCTTGTGGATACAAAAACAAAAATTTGGCTGTACGAGTTGAAGAATCAAGTTATAATCCCAATTATTTAGCTGTTAAACTTTTGTACCAAGGTGGCCAAACAGAGATTGTGGCTGTCGAGATAGCTGAGATTGGTTCATATGAATGGGTGAGCTTAAGAAGAAACTATGGAGCAGTCTGGGACACAAATAAAGTGCCAAAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGTCGATTGGAAAGTTGGAGCCATATACGATACAGGAGTTCAAATTTACGACATTGCTAAAGAAAGTTGCCCAACATCACAGTGTGGTGATAAACCATGGAAGTGA ATGGTGGACAACGACGAGAGGCTGCAACGGATGGCTTCGGCTAACGGCAAGGCTACACCTGAACACCGGAACCAATCACTTTTTCAATATGGAGGAGCATGTGGTTATGGAGACATGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTCCCCTCTCTCTACAAACAAGGAGCTGGTTGTGGAGCATGTTTTCAGGTAAGATGCAAAGACAAAAGACTATGCAATACAGCAGGGAGCAAAGTGGTATTGACGGATCAAAATTATGATAGCAGAGCAGATTTTGTTCTAAGTAGAAAAGCTTTTTCTGCTATGGCTTTAAAAGGAAAAGGTCAAGAGCTTTTGAATACTGGAATTGTGGATGTAGAATATAAGAGGATACCTTGTGGATACAAAAACAAAAATTTGGCTGTACGAGTTGAAGAATCAAGTTATAATCCCAATTATTTAGCTGTTAAACTTTTGTACCAAGGTGGCCAAACAGAGATTGTGGCTGTCGAGATAGCTGAGATTGGTTCATATGAATGGGTGAGCTTAAGAAGAAACTATGGAGCAGTCTGGGACACAAATAAAGTGCCAAAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGTCGATTGGAAAGTTGGAGCCATATACGATACAGGAGTTCAAATTTACGACATTGCTAAAGAAAGTTGCCCAACATCACAGTGTGGTGATAAACCATGGAAGTGA MVDNDERLQRMASANGKATPEHRNQSLFQYGGACGYGDMALEFTNGYFSAAVPSLYKQGAGCGACFQVRCKDKRLCNTAGSKVVLTDQNYDSRADFVLSRKAFSAMALKGKGQELLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAVKLLYQGGQTEIVAVEIAEIGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKVGAIYDTGVQIYDIAKESCPTSQCGDKPWK* Homology
BLAST of Chy1G006350 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-73 Identity = 129/224 (57.59%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy Swiss-Prot
Match: Q9LZT5 (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.1e-72 Identity = 129/220 (58.64%), Postives = 163/220 (74.09%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.2e-71 Identity = 124/215 (57.67%), Postives = 163/215 (75.81%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 7.7e-66 Identity = 120/231 (51.95%), Postives = 154/231 (66.67%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.0e-65 Identity = 125/257 (48.64%), Postives = 165/257 (64.20%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy TrEMBL
Match: A0A1S3BIG9 (Expansin A3-like protein OS=Cucumis melo OX=3656 GN=LOC103490237 PE=2 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.8e-126 Identity = 219/238 (92.02%), Postives = 226/238 (94.96%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy TrEMBL
Match: A0A5A7TFD4 (Expansin-like A3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003940 PE=3 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121 Identity = 213/234 (91.03%), Postives = 220/234 (94.02%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy TrEMBL
Match: A0A6J1GMD8 (expansin-like A3 OS=Cucurbita moschata OX=3662 GN=LOC111455294 PE=3 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.6e-119 Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy TrEMBL
Match: A0A6J1I0C6 (expansin-like A3 OS=Cucurbita maxima OX=3661 GN=LOC111468283 PE=3 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 5.3e-118 Identity = 204/238 (85.71%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of Chy1G006350 vs. ExPASy TrEMBL
Match: A0A6J1C3K4 (expansin-like A2 OS=Momordica charantia OX=3673 GN=LOC111007935 PE=3 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.7e-113 Identity = 193/238 (81.09%), Postives = 216/238 (90.76%), Query Frame = 0
BLAST of Chy1G006350 vs. NCBI nr
Match: XP_004144877.1 (expansin-like A3 [Cucumis sativus] >KAE8645683.1 hypothetical protein Csa_020570 [Cucumis sativus]) HSP 1 Score: 469 bits (1208), Expect = 4.25e-166 Identity = 227/238 (95.38%), Postives = 230/238 (96.64%), Query Frame = 0
BLAST of Chy1G006350 vs. NCBI nr
Match: XP_008447888.1 (PREDICTED: expansin-like A3 [Cucumis melo] >QDL52558.1 expansin A3-like protein [Cucumis melo]) HSP 1 Score: 457 bits (1176), Expect = 3.20e-161 Identity = 219/238 (92.02%), Postives = 226/238 (94.96%), Query Frame = 0
BLAST of Chy1G006350 vs. NCBI nr
Match: XP_038888736.1 (expansin-like A3 [Benincasa hispida]) HSP 1 Score: 452 bits (1164), Expect = 2.15e-159 Identity = 215/238 (90.34%), Postives = 224/238 (94.12%), Query Frame = 0
BLAST of Chy1G006350 vs. NCBI nr
Match: KAA0040371.1 (expansin-like A3 [Cucumis melo var. makuwa] >TYK23333.1 expansin-like A3 [Cucumis melo var. makuwa]) HSP 1 Score: 439 bits (1130), Expect = 3.77e-154 Identity = 213/234 (91.03%), Postives = 220/234 (94.02%), Query Frame = 0
BLAST of Chy1G006350 vs. NCBI nr
Match: XP_022952669.1 (expansin-like A3 [Cucurbita moschata]) HSP 1 Score: 433 bits (1113), Expect = 1.27e-151 Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 0
BLAST of Chy1G006350 vs. TAIR 10
Match: AT4G38400.1 (expansin-like A2 ) HSP 1 Score: 277.7 bits (709), Expect = 9.3e-75 Identity = 129/224 (57.59%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Chy1G006350 vs. TAIR 10
Match: AT3G45960.2 (expansin-like A3 ) HSP 1 Score: 274.6 bits (701), Expect = 7.8e-74 Identity = 129/220 (58.64%), Postives = 163/220 (74.09%), Query Frame = 0
BLAST of Chy1G006350 vs. TAIR 10
Match: AT3G45970.1 (expansin-like A1 ) HSP 1 Score: 271.2 bits (692), Expect = 8.7e-73 Identity = 124/215 (57.67%), Postives = 163/215 (75.81%), Query Frame = 0
BLAST of Chy1G006350 vs. TAIR 10
Match: AT3G45960.1 (expansin-like A3 ) HSP 1 Score: 263.5 bits (672), Expect = 1.8e-70 Identity = 124/213 (58.22%), Postives = 158/213 (74.18%), Query Frame = 0
BLAST of Chy1G006350 vs. TAIR 10
Match: AT4G17030.1 (expansin-like B1 ) HSP 1 Score: 178.3 bits (451), Expect = 7.7e-45 Identity = 84/202 (41.58%), Postives = 114/202 (56.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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