Chy1G002500 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGGGCTTTATCCACAATCACCTCTACGCTCGGAGGATTCCAATTGTGGAATGAAATTGATGATTCCGACCATTGGCAGAAAGGGATTTACTACGCCTTGTCCGCTTCTTATGCCCTCATCTCCCTCATTGCATTAGTACTCCACTTCTCTCTCTTCCTTACTGTCTTTTTGTTCTCTATCTTCTCAATTTCATTACTTATTTGAAGCTTCTTCTTCTTTTTATTTTTTATTTTTTTGTATGTGTGTTTTCATCTCTTTATTGGAATTTAACATGGCTTCTTTCCTAATGGAAACAACCCCAGAATCATGATGTCTCTTTCTTATTTATGATTATTAGTAAAATAGACTTGTGGGTGTGCTGTGTGCTTATACTATATGTGTGAGGTGATTACAATGGTTAGAGGTACTGATTTTCTGTGATAATTTAAGATAGTTCTTTGGGTTTCACACTCAGTCGAGTTGGGATTCAATTCTTTGGGTAATTAGGGTGATCAATTAATGTCTAAAATTAATCTGTACTCTTAAGAATGAAGTTTCATTGAATTGTATTGAGTGTTTTTATGGAAACTCGATATAGCTATTACACGTTGGCTAGGAAACAAGACCCACACTCAATGTGCCAGTCACTGGCACAGCCCTTGGACACCTTGCAAAGGTTGCATTAGGTGTAATTTGTATGTGTGAATTGTTGTCGTAGGTGAAGACACGTGGAAGAAAAATTGTTGCTTTAGGACGGAAGAGGTGTTTTGTCCCACCCTCCATTTTGTTATTAGGGTTTTCTTCTTTGTTGCTCGGCTTTTTCTGCCACCTTGCTCATGGGAGATTGGGTTAGATAGAAAGGAGAATTTTCAATAGTTTTGACTGTGAGAGATCTTGGGAAGATGTTCAGTCTTGTATTAGATTTAATACTTCCCTTTGGGCATTGGCATCAAAGGAATTTCATAAAAAATCTTGGGAAAAATACGTTTTTGGTTAGGTTTTGAGTTTGGTTTGGTTTCCCTATGCTCCCCTAGGTTTCAAAGTTAACACATTTAGTCCTTAAGTTTTGGGTTTAGTTTCAATCTAGTCCCTAAATTTATAAATGTTGACTAAATTTATAAATGTTACAATCTCTCTTGATGTCAATATCTATTAATTAATTTAAGATGATTGAGAAGTAAGTTGTAAATTTAATTTCAGTAGAGATAAAATATATTTTAACTTATTTAATCATAATTATTTTAAATTAATTAAACACATTAAACTAAAGACGGAAAATGAATACGTAGTGGAAAATCATCCACATCAAAGTTAAAAGGGTGAATCTTGAAATCTAGTTACTAAATTGAGCAAACTCAAATATGAAGGTTAAAATTTGTAACCATTACTAATTTGAAACTAAACTCAGAACTCGAAGAACTAAATGGGTAAAATTTTGAAACCTAGAGACAAAATAGAAACTAGATCGGACCAAAAAGGTTCATTTCCCAAAATTCTTTAGACATGGTTCTCTTGGATTGGAGCCTTTTTTTTCCCCCTTTTCCCCCCCTTTTTTTTAGATAGCTAGATCATTTTTTGGTAGCTTCTTTTGTAAAGGTATGTCCTTTTGTATTCTTTTGTTGGTTTCTCATTAAAAAAAGAAAGAAAGAAAGAAGTTGCATAATTTAGATTAAGTAGCTGTCGTGGGAAAGAGAACGCAGCATTTTGTTTTTATAATAACGCCTAATACAGTGAGTAATTGCTCAAGTTTCCAGGTTCAACTTATTCGGATTCAAATAAGAGTACCGGAATTCGAATGGACTACACAAAAGGGGTTCCATTTGATGAATTTCATTGTAAATGGATGTAAGATTGTACATTTGTTATTTTTCCTTAAATTTTAAGGTTCTTTCTTATGAGTTAATTCTAACCTTATTTTCATTTTGACAGTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTCTTCCTCATCAAACCGAAGGTAGGTTTCTTCTGTTAATTGTCGCTATGCCAACTATGATTGTCTTGCTTTTAATCCCCTATTAGAGCAGTGGCTATCATGTGATCATCGAGTGTATCTAGGTCTCATTTTGATGTTTTCTTGAGATTATTTAAGAGTTAAAAGGATGATAATCCAAACTAAAACTTTTGATTGATCTTATTATAAGCACCTTCCTTTTGTTATAGGTTACTTGTTACTTCAGAACATTTCTAGAATAAATTGATTTATTCTTCATTCAGCAAAGCTTTCATCCAACATGCTAAGCTTACTTGAACAGACGAAAAGGGAGAAAACAAAGAAAAGCTAATAACAGGACAACGACCTCCACAAATCTCCCAATTAATATGATATTGTCCACTTTGGCATAATGCTTCATGGTTTTGCTTGTGGTTTCTCCCAAAAAAGCCCCATATCAATGAAGATAGTTGTTCTCACTAATATACTCTTGATCGTCCTCTTATCTAGCCAATGTGGGACATTGATCACATACCCAACAATTCTTATCTGGTAGAGAGGACCAATAAGCCTTTGCTTAAATGGTCATTCATGGTTAGTTCTTCTTCACTGGAGCACACCACCTATTTGATAGAGTCAACCGCAGATCCCTCATAACTACATCTTTGTTTCACACTTAAGGATTCTATCGAATTGACTAAGTTAGAGGCATTGTTCTGATACCATTTGATGAGGACATCTACCCCCAAATTATCTCCACAATAGTACGATATTATCCAATTTTGGGATAAACCCTCATGGTTTTGCTTGTGGTTTCACTTTAAAATGCTTCATACTAATGAAGATTGGTAGTCTCACTTATTTGCCTCTAACCATCCTCTTCCCTAGTCAGTGCAGAACTTTTGTTGGAAATTTCGCATTTTTATTTGAATTTATGGTAATATCTTATTCAATTTTCTTTGTTTCCCCTGGACTGTCAAGAAACATAAATAAACATTAAAAAAAAAAAAAAAAAAAAAAAATCCGGTTGCTGTTGGACTGTTTGTCATAAACATTCATGGGTTTCTCCCCTTATCTGATAATGGGAACCATAGCATTATTAGATAAAGATCTGTTGCGTTATGCTTTTTTGTTACCCATCACAATCCAGTCAGCGGGCCATCTTATTCCCATATCAAAAAAGCAAGTCAATATGTAAACTTAAAATTGATAATCTAGATATTTAAAGAGACCCACGTTCATTTTCCCATGCTGTAACTGTACGGGTTGAAACTTTGCTGCTGGTAAAGGTTCTTGAAATGGTGATTATGGAGATTCCTGGACTTCTATTCTTTTCAACGTATACACTGCTTGTTCTATTTTGGGCAGAGATATACCACCAGGTAATTTGTGATTATTATTATTATTTAATCTAATCCGAGTTACATTACATATAATATCAATTCTATGCAAGACTCATTCTCCATTTGTATTGGTGATTATTTTTCTTTCAGGCACGAAGTCTTCCTGTTAGCAAACTTAAGCCTACTTACTGTATCATCAATGGAGTTATGTACATTATACAGGTAAAATAAAAGATGTCAGCCAAAAGTTGTCAGTGCTATATGAAACATAAAATGCTTAATTTGATTGATTTGTTTACGTTCAGCTCTGTTTCAATTATTTTATTTGTCATTGTGTTTCAGATCTGCATTTGGATTATTGTGATGTTAGAGCATTCTCCTGGTGCAGTTATAGTTGCTAAGCTCTTCTTTTCAGGTTGCAGTTCAAAACTTGCATTTTTTTCTCTTATATGAAAGATAAGAAATGGGGTGTATAATTGATGTCCATTTCAACTTAAATCTTTTGTCTTCCACGTTCTACTTTAAGGAGACATATGTATTGAATCTTTTCTTTACTATTTCCAGTGGTTTCATTCTCTGCTGCACTGGGTTTCCTGATATATGGTGGGAG ATGGCGAGGGCTTTATCCACAATCACCTCTACGCTCGGAGGATTCCAATTGTGGAATGAAATTGATGATTCCGACCATTGGCAGAAAGGGATTTACTACGCCTTGTCCGCTTCTTATGCCCTCATCTCCCTCATTGCATTAGTTCAACTTATTCGGATTCAAATAAGAGTACCGGAATTCGAATGGACTACACAAAAGGGGTTCCATTTGATGAATTTCATTGTAAATGGATTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTCTTCCTCATCAAACCGAAGGTTCTTGAAATGGTGATTATGGAGATTCCTGGACTTCTATTCTTTTCAACGTATACACTGCTTGTTCTATTTTGGGCAGAGATATACCACCAGGCACGAAGTCTTCCTGTTAGCAAACTTAAGCCTACTTACTGTATCATCAATGGAGTTATGTACATTATACAGATCTGCATTTGGATTATTGTGATGTTAGAGCATTCTCCTGGTGCAGTTATAGTTGCTAAGCTCTTCTTTTCAGTGGTTTCATTCTCTGCTGCACTGGGTTTCCTGATATATGGTGGGAG ATGGCGAGGGCTTTATCCACAATCACCTCTACGCTCGGAGGATTCCAATTGTGGAATGAAATTGATGATTCCGACCATTGGCAGAAAGGGATTTACTACGCCTTGTCCGCTTCTTATGCCCTCATCTCCCTCATTGCATTAGTTCAACTTATTCGGATTCAAATAAGAGTACCGGAATTCGAATGGACTACACAAAAGGGGTTCCATTTGATGAATTTCATTGTAAATGGATTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTCTTCCTCATCAAACCGAAGGTTCTTGAAATGGTGATTATGGAGATTCCTGGACTTCTATTCTTTTCAACGTATACACTGCTTGTTCTATTTTGGGCAGAGATATACCACCAGGCACGAAGTCTTCCTGTTAGCAAACTTAAGCCTACTTACTGTATCATCAATGGAGTTATGTACATTATACAGATCTGCATTTGGATTATTGTGATGTTAGAGCATTCTCCTGGTGCAGTTATAGTTGCTAAGCTCTTCTTTTCAGTGGTTTCATTCTCTGCTGCACTGGGTTTCCTGATATATGGTGGGAG MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPVSKLKPTYCIINGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGX Homology
BLAST of Chy1G002500 vs. ExPASy Swiss-Prot
Match: Q402F4 (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 7.5e-58 Identity = 107/172 (62.21%), Postives = 138/172 (80.23%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy Swiss-Prot
Match: Q9FEG2 (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.0e-54 Identity = 103/172 (59.88%), Postives = 135/172 (78.49%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy Swiss-Prot
Match: Q9ZUM2 (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=1 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 1.5e-45 Identity = 82/172 (47.67%), Postives = 134/172 (77.91%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy Swiss-Prot
Match: Q402F3 (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.6e-44 Identity = 84/172 (48.84%), Postives = 130/172 (75.58%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy Swiss-Prot
Match: Q948R8 (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.0e-43 Identity = 83/176 (47.16%), Postives = 132/176 (75.00%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy TrEMBL
Match: A0A0A0K5Z8 (DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062880 PE=3 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 5.9e-98 Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy TrEMBL
Match: A0A1S3C0C4 (tobamovirus multiplication protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495421 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 9.7e-93 Identity = 179/189 (94.71%), Postives = 183/189 (96.83%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy TrEMBL
Match: A0A6J1JNL1 (tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486099 PE=3 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.1e-83 Identity = 156/182 (85.71%), Postives = 171/182 (93.96%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy TrEMBL
Match: A0A6J1HVA7 (tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467004 PE=3 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.1e-83 Identity = 162/189 (85.71%), Postives = 176/189 (93.12%), Query Frame = 0
BLAST of Chy1G002500 vs. ExPASy TrEMBL
Match: A0A6J1EME9 (tobamovirus multiplication protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434684 PE=3 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 5.9e-82 Identity = 154/182 (84.62%), Postives = 170/182 (93.41%), Query Frame = 0
BLAST of Chy1G002500 vs. NCBI nr
Match: XP_004136876.1 (tobamovirus multiplication protein 1 isoform X1 [Cucumis sativus] >KGN43722.1 hypothetical protein Csa_017225 [Cucumis sativus]) HSP 1 Score: 366 bits (939), Expect = 6.39e-126 Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Chy1G002500 vs. NCBI nr
Match: XP_008455199.1 (PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 348 bits (894), Expect = 4.52e-119 Identity = 179/189 (94.71%), Postives = 183/189 (96.83%), Query Frame = 0
BLAST of Chy1G002500 vs. NCBI nr
Match: XP_038888866.1 (tobamovirus multiplication protein 1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 339 bits (870), Expect = 2.03e-115 Identity = 170/189 (89.95%), Postives = 181/189 (95.77%), Query Frame = 0
BLAST of Chy1G002500 vs. NCBI nr
Match: XP_022967523.1 (tobamovirus multiplication protein 1-like [Cucurbita maxima] >XP_022967525.1 tobamovirus multiplication protein 1-like [Cucurbita maxima]) HSP 1 Score: 316 bits (809), Expect = 3.74e-106 Identity = 162/189 (85.71%), Postives = 176/189 (93.12%), Query Frame = 0
BLAST of Chy1G002500 vs. NCBI nr
Match: XP_022988878.1 (tobamovirus multiplication protein 1-like [Cucurbita maxima] >XP_022988879.1 tobamovirus multiplication protein 1-like [Cucurbita maxima]) HSP 1 Score: 316 bits (809), Expect = 3.74e-106 Identity = 159/189 (84.13%), Postives = 174/189 (92.06%), Query Frame = 0
BLAST of Chy1G002500 vs. TAIR 10
Match: AT4G21790.1 (tobamovirus multiplication 1 ) HSP 1 Score: 214.5 bits (545), Expect = 7.2e-56 Identity = 103/172 (59.88%), Postives = 135/172 (78.49%), Query Frame = 0
BLAST of Chy1G002500 vs. TAIR 10
Match: AT2G02180.1 (tobamovirus multiplication protein 3 ) HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46 Identity = 82/172 (47.67%), Postives = 134/172 (77.91%), Query Frame = 0
BLAST of Chy1G002500 vs. TAIR 10
Match: AT1G14530.1 (Protein of unknown function (DUF1084) ) HSP 1 Score: 177.9 bits (450), Expect = 7.4e-45 Identity = 83/176 (47.16%), Postives = 132/176 (75.00%), Query Frame = 0
BLAST of Chy1G002500 vs. TAIR 10
Match: AT1G14530.2 (Protein of unknown function (DUF1084) ) HSP 1 Score: 177.9 bits (450), Expect = 7.4e-45 Identity = 83/176 (47.16%), Postives = 132/176 (75.00%), Query Frame = 0
BLAST of Chy1G002500 vs. TAIR 10
Match: AT3G59090.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 8.3e-04 Identity = 29/91 (31.87%), Postives = 42/91 (46.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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