Chy1G001750 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G001750
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH01: 1199079 .. 1199876 (+)
RNA-Seq Expression	Chy1G001750
Synteny	Chy1G001750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAACGAATCTTTGATCGTTGTAGGAGTAGTTCCTACATGGGCATGAGACTAAGAATTTGTGACGACCCCGTTCAAAGGCGTCAACCACAAAGCCGGATTCGAATTCGACATACAACATTTGTCAAACAAATCGACCTGAATTTCAAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAGCACGTAGTATCACAACATCCCTTTGCTACTTTCCGACTTCCTATCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATAGGTATAGACACATCATCAACATCGAGCATGTGGTTGACGAAATAATAAAACATTGGGTTACAAAAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTGTAGGGTGTTTAAAAGGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATAGTTCGTGTAATGGATCATCAACCACAGGTAATGATGATGGTTCCAACAAGCGACAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAAAGAAACTAGGGGATGATGACAGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGACGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCCATGCCTACAAATTAA

mRNA sequence

ATGGCCGAACGAATCTTTGATCGTTGTAGGAGTAGTTCCTACATGGGCATGAGACTAAGAATTTGTGACGACCCCGTTCAAAGGCGTCAACCACAAAGCCGGATTCGAATTCGACATACAACATTTGTCAAACAAATCGACCTGAATTTCAAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAGCACGTAGTATCACAACATCCCTTTGCTACTTTCCGACTTCCTATCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATAGGTATAGACACATCATCAACATCGAGCATATAGTTCGTGTAATGGATCATCAACCACAGGTAATGATGATGGTTCCAACAAGCGACAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAAAGAAACTAGGGGATGATGACAGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGACGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCCATGCCTACAAATTAA

Coding sequence (CDS)

ATGGCCGAACGAATCTTTGATCGTTGTAGGAGTAGTTCCTACATGGGCATGAGACTAAGAATTTGTGACGACCCCGTTCAAAGGCGTCAACCACAAAGCCGGATTCGAATTCGACATACAACATTTGTCAAACAAATCGACCTGAATTTCAAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAGCACGTAGTATCACAACATCCCTTTGCTACTTTCCGACTTCCTATCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATAGGTATAGACACATCATCAACATCGAGCATATAGTTCGTGTAATGGATCATCAACCACAGGTAATGATGATGGTTCCAACAAGCGACAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAAAGAAACTAGGGGATGATGACAGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGACGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCCATGCCTACAAATTAA

Protein sequence

MAERIFDRCRSSSYMGMRLRICDDPVQRRQPQSRIRIRHTTFVKQIDLNFKVQLKCQHFQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINIEHIVRVMDHQPQVMMMVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN*

Homology

[Close]

BLAST of Chy1G001750 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.3e-09
Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 164 CVICLEEIGKEEKGSDGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN 217
           CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of Chy1G001750 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.3e-09
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 135 PTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGE 194
           P S SA+ES L RV   EI         +C +C E     E G +G   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRV---EISDCHTKAEANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 195 CINKWLNTSHYCPTCRFPMPTN 217
           CI  WL+  + CP CRF +P++
Sbjct: 250 CIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Chy1G001750 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-09
Identity = 33/97 (34.02%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 120 IVRVMDHQPQVMMMVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSD 179
           I ++ ++ P      P S SA++++      +++ K    +   C +C++E    E GSD
Sbjct: 175 IQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEF---EDGSD 234

Query: 180 GVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN 217
             V QMPC HVFH +C+  WL   + CP CRF +PT+
Sbjct: 235 --VKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

[Close]

BLAST of Chy1G001750 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-08
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 157 GDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN 216
           G    + C +CL E  +EE       ++MPC H+FH  CI  WL+ ++ CP CR+ +PT+
Sbjct: 69  GSQAELKCPVCLLEFEEEE-----TAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTD 123

[Close]

BLAST of Chy1G001750 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 6.2e-08
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 159 DDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN 217
           D  + C +CL E  ++E      V +MPC H+FH  CI  WLN ++ CP CR  +PT+
Sbjct: 74  DKGVKCPVCLLEFEEQES-----VREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTD 126

[Close]

BLAST of Chy1G001750 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.6e-102
Identity = 194/263 (73.76%), Postives = 204/263 (77.57%), Query Frame = 0


Query: 1   MAERIFDRCRSSSYMGMRLRICDDPVQRRQPQSRIRIRHT--TFVKQIDLNFKVQLKCQH 60
           MAERIFDRCR  SYMGM+LRICDDPVQRR+PQ++IR R    TF KQIDLNF+VQLKCQH
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINIE 120
           FQIREEETSNTTTLIDEH+VSQHPFATFRLPISI +HGDKTLKLLLFREFH YR IINIE
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 H---------------------------------------------IVRVMDHQPQVMMM 180
           H                                             IVRVMD+QPQV+MM
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMM 180

Query: 181 VPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHG 217
           VPTSDSAMESMLKRVENEEI KLGDDD IHCVICLEEIGKEEKGS+GVVLQMPCLHVFHG
Sbjct: 181 VPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG 240

[Close]

BLAST of Chy1G001750 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.8e-66
Identity = 149/263 (56.65%), Postives = 171/263 (65.02%), Query Frame = 0


Query: 1   MAERIFDRCR--SSSYMGMRLRICDDPVQRRQPQSRI-RIRHTTFVKQIDLNFKVQLKCQ 60
           MAE IF+ CR  S SYMGM LRI  DP  R QP ++I +    T V+QI L FKVQLKCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRI-TDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINI 120
           HFQ+ E    ++TTL+ EH+ SQH FATF+LPISIFKHGDKTLK +LFREF  Y  IINI
Sbjct: 61  HFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINI 120

Query: 121 E--------HIVRVMDH---------------------------------QPQVMM---- 180
           E        H VR ++                                  QP++ M    
Sbjct: 121 ELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP 180

Query: 181 -MVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVF 215
            MVPTSDSA+ESMLKRVENEEI K GDD+SI+CV+CLEEI KEEKGS+  VLQMPCLH+F
Sbjct: 181 LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMF 240

[Close]

BLAST of Chy1G001750 vs. ExPASy TrEMBL
Match: E5GCQ3 (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.8e-66
Identity = 149/263 (56.65%), Postives = 171/263 (65.02%), Query Frame = 0


Query: 1   MAERIFDRCR--SSSYMGMRLRICDDPVQRRQPQSRI-RIRHTTFVKQIDLNFKVQLKCQ 60
           MAE IF+ CR  S SYMGM LRI  DP  R QP ++I +    T V+QI L FKVQLKCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRI-TDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINI 120
           HFQ+ E    ++TTL+ EH+ SQH FATF+LPISIFKHGDKTLK +LFREF  Y  IINI
Sbjct: 61  HFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINI 120

Query: 121 E--------HIVRVMDH---------------------------------QPQVMM---- 180
           E        H VR ++                                  QP++ M    
Sbjct: 121 ELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP 180

Query: 181 -MVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVF 215
            MVPTSDSA+ESMLKRVENEEI K GDD+SI+CV+CLEEI KEEKGS+  VLQMPCLH+F
Sbjct: 181 LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMF 240

[Close]

BLAST of Chy1G001750 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.4e-65
Identity = 151/268 (56.34%), Postives = 169/268 (63.06%), Query Frame = 0


Query: 1   MAERIFDRCR--SSSYMGMRLRICDDPVQRRQPQSRIRI--RHTTFVKQIDLNFKVQLKC 60
           MAE+IF  CR  S SY+GM LRI  DP  R QPQS+IR      T VKQIDLNFKV++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRI-TDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QH-FQIREEETSN-TTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHI 120
           QH FQ  E   S   T L+ EH+ S HP  T +LP+SIFKHGDKTLK LLFREF  YR I
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INIEHIV----------------------------------------------RVMDHQP 180
           INIE +V                                               +M  QP
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 QVMMMVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCL 217
           QV MMVPTS+SAMESMLK+VENEEI K GD+ SI+CVICLEEI KE+KGS+ VVLQMPCL
Sbjct: 181 QV-MMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCL 240

[Close]

BLAST of Chy1G001750 vs. ExPASy TrEMBL
Match: A0A0A0K2A1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.8e-63
Identity = 140/262 (53.44%), Postives = 164/262 (62.60%), Query Frame = 0


Query: 1   MAERIFDRCRSSSYMGMRLRICDDPVQRRQPQSRIRIRHTTFVKQIDLNFKVQLKCQHFQ 60
           MAE+ FD C S  YMGM LRI  DP+Q R           T VKQIDLNFKV++KCQHFQ
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRI-TDPIQTRS-------NSPTSVKQIDLNFKVEVKCQHFQ 60

Query: 61  IREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINIEHI 120
             EE+T+  TT + EH+++  PF   +LP+SIFKHGDKTLK LLF++F  +R IINIE +
Sbjct: 61  AGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELV 120

Query: 121 V-RVMDH---------------------------------------------QPQVMMMV 180
             +++ H                                             QPQV  MV
Sbjct: 121 TDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQV-RMV 180

Query: 181 PTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGE 217
           PTSDSAM+SMLKRVENEEI K+GD  SI CVICLE+I KEEKGS+GVVLQMPCLH+FH E
Sbjct: 181 PTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEE 240

[Close]

BLAST of Chy1G001750 vs. NCBI nr
Match: KAE8645830.1 (hypothetical protein Csa_017091 [Cucumis sativus])

HSP 1 Score: 339 bits (869), Expect = 3.65e-112
Identity = 178/246 (72.36%), Postives = 188/246 (76.42%), Query Frame = 0


Query: 1   MAERIFDRCRSSSYMGMRLRICDDPVQRRQPQSRIRIRHT--TFVKQIDLNFKVQLKCQH 60
           MAERIFDRCR  SYMGM+LRICDDPVQRR+PQ++IR R    TF KQIDLNF+VQLKCQH
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINIE 120
           FQIREEETSNTTTLIDEH+VSQHPFATFRLPISI +HGDKTLKLLLFREFH YR IINIE
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 H---------------------------------------------IVRVMDHQPQVMMM 180
           H                                             IVRVMD+QPQV+MM
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMM 180

Query: 181 VPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHG 199
           VPTSDSAMESMLKRVENEEI KLGDDD IHCVICLEEIGKEEKGS+GVVLQMPCLHVFHG
Sbjct: 181 VPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHG 240

[Close]

BLAST of Chy1G001750 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (655), Expect = 1.43e-82
Identity = 149/263 (56.65%), Postives = 171/263 (65.02%), Query Frame = 0


Query: 1   MAERIFDRCR--SSSYMGMRLRICDDPVQRRQPQSRI-RIRHTTFVKQIDLNFKVQLKCQ 60
           MAE IF+ CR  S SYMGM LRI D P  R QP ++I +    T V+QI L FKVQLKCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITD-PNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINI 120
           HFQ+ E    ++TTL+ EH+ SQH FATF+LPISIFKHGDKTLK +LFREF  Y  IINI
Sbjct: 61  HFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINI 120

Query: 121 E--------HIVRVMDH---------------------------------QPQVMM---- 180
           E        H VR ++                                  QP++ M    
Sbjct: 121 ELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP 180

Query: 181 -MVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVF 214
            MVPTSDSA+ESMLKRVENEEI K GDD+SI+CV+CLEEI KEEKGS+  VLQMPCLH+F
Sbjct: 181 LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMF 240

[Close]

BLAST of Chy1G001750 vs. NCBI nr
Match: ADN34253.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >TYK06864.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (628), Expect = 1.51e-78
Identity = 140/260 (53.85%), Postives = 170/260 (65.38%), Query Frame = 0


Query: 1   MAERIFDRCRSSSY-MGMRLRICDDPVQRRQPQSRIRIRHTT--FVKQIDLNFKVQLKCQ 60
           MAE+  D C S+ Y MGM LRI D  ++ RQPQS+I+ +  +   VKQIDLNFK+Q+KCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINI 120
           HF   EE ++  TTL+ EH++SQ  F   +LPISIFK GDKTLK LLF++F  +R I+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 EHIV-RVMDH---------------------------------------QPQVMMMVPTS 180
           E +V  ++ H                                       QPQ +MMVPTS
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS 180

Query: 181 DSAMESMLKRVEN-EEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGECI 216
           D+AMESMLKRVEN EE+ KLGDD SI CVICLE+IGKEEK S  VVLQMPCLH+FH ECI
Sbjct: 181 DNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECI 240

[Close]

BLAST of Chy1G001750 vs. NCBI nr
Match: KAA0031413.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (624), Expect = 6.11e-78
Identity = 139/260 (53.46%), Postives = 170/260 (65.38%), Query Frame = 0


Query: 1   MAERIFDRCRSSSY-MGMRLRICDDPVQRRQPQSRIRIRHTT--FVKQIDLNFKVQLKCQ 60
           MAE+  D C S+ Y MGM LRI D  ++ RQPQS+I+ +  +   VKQIDLNFK+Q+KCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQIREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINI 120
           HF   EE ++  TTL+ EH++SQ  F   +LPISIFK GDKTLK LLF++F  +R I+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 EHIV-RVMDH---------------------------------------QPQVMMMVPTS 180
           E +V  ++ H                                       QPQ +MMVPTS
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENSSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS 180

Query: 181 DSAMESMLKRVEN-EEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGECI 216
           D+AMESMLKRVEN +E+ KLGDD SI CVICLE+IGKEEK S  VVLQMPCLH+FH ECI
Sbjct: 181 DNAMESMLKRVENNKELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECI 240

[Close]

BLAST of Chy1G001750 vs. NCBI nr
Match: KAE8645828.1 (hypothetical protein Csa_017274 [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 7.61e-78
Identity = 141/262 (53.82%), Postives = 165/262 (62.98%), Query Frame = 0


Query: 1   MAERIFDRCRSSSYMGMRLRICDDPVQRRQPQSRIRIRHTTFVKQIDLNFKVQLKCQHFQ 60
           MAE+ FD C S  YMGM LRI D P+Q R           T VKQIDLNFKV++KCQHFQ
Sbjct: 267 MAEQNFDDCTSGYYMGMSLRITD-PIQTRSNSP-------TSVKQIDLNFKVEVKCQHFQ 326

Query: 61  IREEETSNTTTLIDEHVVSQHPFATFRLPISIFKHGDKTLKLLLFREFHRYRHIINIEHI 120
             EE+T+  TT + EH+++  PF   +LP+SIFKHGDKTLK LLF++F  +R IINIE +
Sbjct: 327 AGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELV 386

Query: 121 V-RVMDH---------------------------------------------QPQVMMMV 180
             +++ H                                             QPQV M V
Sbjct: 387 TDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRM-V 446

Query: 181 PTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGE 216
           PTSDSAM+SMLKRVENEEI K+GD  SI CVICLE+I KEEKGS+GVVLQMPCLH+FH E
Sbjct: 447 PTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEE 506

[Close]

BLAST of Chy1G001750 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 31/85 (36.47%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 135 PTSDSAMESM-LKRVENEEIKKLGDDDSIHCVICLEE--IGKEEKGSDGVVLQMPCLHVF 194
           P S S ++++ +  + NE++ +  DDD++ C +C EE  +GKE       V ++PC H +
Sbjct: 343 PASKSFIKNLKVSPLSNEDVME-NDDDAVCCAVCKEEMIVGKE-------VAELPCRHKY 402

Query: 195 HGECINKWLNTSHYCPTCRFPMPTN 217
           H ECI  WL   + CP CRF +P++
Sbjct: 403 HSECIVPWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of Chy1G001750 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 164 CVICLEEIGKEEKGSDGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN 217
           CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of Chy1G001750 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 135 PTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSDGVVLQMPCLHVFHGE 194
           P S SA+ES L RV   EI         +C +C E     E G +G   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRV---EISDCHTKAEANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 195 CINKWLNTSHYCPTCRFPMPTN 217
           CI  WL+  + CP CRF +P++
Sbjct: 250 CIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Chy1G001750 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.0e-10
Identity = 33/97 (34.02%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 120 IVRVMDHQPQVMMMVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEEKGSD 179
           I ++ ++ P      P S SA++++      +++ K    +   C +C++E    E GSD
Sbjct: 175 IQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEF---EDGSD 234

Query: 180 GVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPTN 217
             V QMPC HVFH +C+  WL   + CP CRF +PT+
Sbjct: 235 --VKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

[Close]

BLAST of Chy1G001750 vs. TAIR 10
Match: AT3G13228.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 31/99 (31.31%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 116 NIEHIVRVMDHQPQVMMMVPTSDSAMESMLKRVENEEIKKLGDDDSIHCVICLEEIGKEE 175
           +IE  V+V   +     + P S   ++S+ +++  ++I   G+     C ICLEE     
Sbjct: 232 DIEEAVQVSFDETTNFCLGPASKLVVKSLTRKI-YDKINYTGE----RCTICLEEF---- 291

Query: 176 KGSDGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 215
             + G+++ +PC H F  EC  KW  T+H+CP CR+ +P
Sbjct: 292 -NAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYELP 320

The following BLAST results are available for this feature:

BLAST of Chy1G001750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	4.3e-09	52.83	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q9SNB6	4.3e-09	41.46	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q8LPN7	5.6e-09	34.02	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9P0P0	4.8e-08	38.33	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1	[more]
Q7ZW78	6.2e-08	41.38	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]

BLAST of Chy1G001750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2A5	2.6e-102	73.76	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P...	[more]
A0A5D3C4K6	8.8e-66	56.65	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCQ3	8.8e-66	56.65	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0K7L0	3.4e-65	56.34	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]
A0A0A0K2A1	1.8e-63	53.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 P...	[more]

BLAST of Chy1G001750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645830.1	3.65e-112	72.36	hypothetical protein Csa_017091 [Cucumis sativus]	[more]
ADN34252.1	1.43e-82	56.65	hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putati...	[more]
ADN34253.1	1.51e-78	53.85	hypothetical zinc finger protein [Cucumis melo subsp. melo] >TYK06864.1 putative...	[more]
KAA0031413.1	6.11e-78	53.46	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
KAE8645828.1	7.61e-78	53.82	hypothetical protein Csa_017274 [Cucumis sativus]	[more]

BLAST of Chy1G001750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60820.1	6.2e-11	36.47	RING/U-box superfamily protein	[more]
AT1G26800.1	3.1e-10	52.83	RING/U-box superfamily protein	[more]
AT3G46620.1	3.1e-10	41.46	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G19950.1	4.0e-10	34.02	RING/U-box superfamily protein	[more]
AT3G13228.1	6.8e-10	31.31	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 163..210 e-value: 4.2E-4 score: 19.0
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 164..209 e-value: 7.0E-8 score: 42.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 163..210 e-value: 8.0E-13 score: 48.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 164..210 score: 12.725326
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 123..215 e-value: 2.4E-18 score: 67.6
None	No IPR available	PANTHER	PTHR15710:SF77	OS07G0631200 PROTEIN	coord: 67..213
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 67..213
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 153..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G001750.1	Chy1G001750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding