Chy12G221950 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G221950
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DhaK domain-containing protein
Location	chrH12: 19497448 .. 19497639 (+)
RNA-Seq Expression	Chy12G221950
Synteny	Chy12G221950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTTTCCAATGAACAACAACGGTCTCCTCCTTCTTCTATCGGTTTCTCTTCCTCTGATATTTATGTTATGACAGGCTGTAGAGAGCAGGAGAGAGAAAGCAAAGAGATTGATTTCCTTATTTTGGTTAAAGGAAAGTCAAAATTAATTCCAGATGTTCTATCCAAGCTGGAAGCCCAAAAGGCATGA

mRNA sequence

ATGAATTTTTCCAATGAACAACAACGGTCTCCTCCTTCTTCTATCGGTTTCTCTTCCTCTGATATTTATGTTATGACAGGCTGTAGAGAGCAGGAGAGAGAAAGCAAAGAGATTGATTTCCTTATTTTGGTTAAAGGAAAGTCAAAATTAATTCCAGATGTTCTATCCAAGCTGGAAGCCCAAAAGGCATGA

Coding sequence (CDS)

ATGAATTTTTCCAATGAACAACAACGGTCTCCTCCTTCTTCTATCGGTTTCTCTTCCTCTGATATTTATGTTATGACAGGCTGTAGAGAGCAGGAGAGAGAAAGCAAAGAGATTGATTTCCTTATTTTGGTTAAAGGAAAGTCAAAATTAATTCCAGATGTTCTATCCAAGCTGGAAGCCCAAAAGGCATGA

Protein sequence

MNFSNEQQRSPPSSIGFSSSDIYVMTGCREQERESKEIDFLILVKGKSKLIPDVLSKLEAQKA*

Homology

[Close]

BLAST of Chy12G221950 vs. ExPASy TrEMBL
Match: A0A5D3BKE0 (DhaK domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00260 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-19
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 1   MNFSNEQQRSPPSSIGFSSSDIYVMTGCREQERESKEIDFLILVKGKSKLIPDVLSKLEA 60
           MNFSNE+QRSP S I F SSDIYVMTGCREQ+RESK++D  ILVKGKSKLIPDVL KLEA
Sbjct: 240 MNFSNEEQRSPLSPIVFFSSDIYVMTGCREQDRESKDVDIPILVKGKSKLIPDVLPKLEA 299

Query: 61  QKA 64
           QKA
Sbjct: 300 QKA 302

[Close]

BLAST of Chy12G221950 vs. NCBI nr
Match: TYJ98835.1 (hypothetical protein E5676_scaffold248G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (249), Expect = 1.14e-23
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 1   MNFSNEQQRSPPSSIGFSSSDIYVMTGCREQERESKEIDFLILVKGKSKLIPDVLSKLEA 60
           MNFSNE+QRSP S I F SSDIYVMTGCREQ+RESK++D  ILVKGKSKLIPDVL KLEA
Sbjct: 240 MNFSNEEQRSPLSPIVFFSSDIYVMTGCREQDRESKDVDIPILVKGKSKLIPDVLPKLEA 299

Query: 61  QKA 63
           QKA
Sbjct: 300 QKA 302

The following BLAST results are available for this feature:

BLAST of Chy12G221950 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G221950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKE0	7.0e-19	82.54	DhaK domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Chy12G221950 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98835.1	1.14e-23	82.54	hypothetical protein E5676_scaffold248G00260 [Cucumis melo var. makuwa]	[more]

BLAST of Chy12G221950 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G221950.1	Chy12G221950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006071	glycerol metabolic process
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0004371	glycerone kinase activity