Chy12G220190 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGACTGATGAGAGAAATGAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCGGTGAAACTTATTGGTTGTTTTGGGTGGCTTTGTTTACACTCTGCATAATTTCCACTGCAATTTTCTCTTGCTCCGATGGCATGTCGAAAGACCGGAATTCCACGGTTGACGTTGAGCTTTACGGCGGCGGTTGTGCCGCCGGGTGTGGCGCTGGATGTGGTGCTTGAAAAATAGACAACCCCTCGCCTTCTTTTCTTCTTCTTCTTTTTCTTCTATAGGAAACAGATTATGTTTTGGATTTTTAAAGCCATGAGAGAAACAGAGAGAGAGCTTGTTTTGAAGATACTGACTGACATCAATTTTGTTACATTTTCACTGTGATTTAGCAGCAGCCTCGAGTTTAGTACTTCTCTTTTATTATTGTTATTATCATTATAATGTTAATACAAATCGTTAGAGGTTCTAACATGACTATGCAAGGCTTGGTTTTTTATATAGATTTGATTCAATACTTAAGTTTTACTTGTTTTACTTTATTTGGAGATATATAACACGTAAACGTTCTTGAAGCCATACATATCTTTATATCTTTCAAATATCATAAATATATTTTACAATCACAATTTAGTCGAACTAGCTTATTCAATCAAACGACTATCACGATGACACGTGCTAGCTATTGGCTAAAATTGATAACTAGTATTAATCAATCTTAATTTAGTAATCATTGAGGTAATTGGAGGATCGAGTTGTGTACCTTTTTATGACAATATAATTAGATTAATTGTGGGCTTATTTAACAGTTTATAAAAAGTTAGCAATCGGTTCATTAAATAAGTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGA ATGGCAAGACTGATGAGAGAAATGAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCGGTGAAACTTATTGGTTGTTTTGGGTGGCTTTGTTTACACTCTGCATAATTTCCACTGCAATTTTCTCTTGCTCCGATGGCATGTCGAAAGACCGGAATTCCACGGTTGACGTTGAGCTTTACGGCGGCGGTTGTGCCGCCGGGTGTGGCGCTGGATGTGTTTATAAAAAGTTAGCAATCGGTTCATTAAATAAGTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGA ATGGCAAGACTGATGAGAGAAATGAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCGGTGAAACTTATTGGTTGTTTTGGGTGGCTTTGTTTACACTCTGCATAATTTCCACTGCAATTTTCTCTTGCTCCGATGGCATGTCGAAAGACCGGAATTCCACGGTTGACGTTGAGCTTTACGGCGGCGGTTGTGCCGCCGGGTGTGGCGCTGGATGTGTTTATAAAAAGTTAGCAATCGGTTCATTAAATAAGTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGA MARLMREMSSQNGSFGLAGGETYWLFWVALFTLCIISTAIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCVYKKLAIGSLNKSRWPSWSKAPVSGTGPKGHGFESHS* Homology
BLAST of Chy12G220190 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Chy12G220190 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14 Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of Chy12G220190 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.9e-14 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Chy12G220190 vs. ExPASy TrEMBL
Match: A0A2P5FVW4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_021890 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of Chy12G220190 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 7.5e-13 Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Chy12G220190 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus]) HSP 1 Score: 148 bits (374), Expect = 6.27e-44 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Chy12G220190 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121 bits (303), Expect = 1.81e-33 Identity = 62/73 (84.93%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of Chy12G220190 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.4 bits (241), Expect = 4.34e-24 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Chy12G220190 vs. NCBI nr
Match: XP_015882794.1 (uncharacterized protein LOC107418606 [Ziziphus jujuba]) HSP 1 Score: 87.4 bits (215), Expect = 4.00e-20 Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of Chy12G220190 vs. NCBI nr
Match: PON38946.1 (hypothetical protein PanWU01x14_308610 [Parasponia andersonii]) HSP 1 Score: 85.9 bits (211), Expect = 1.85e-19 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Chy12G220190 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein ) HSP 1 Score: 44.3 bits (103), Expect = 7.4e-05 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|