Chy12G215940 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTTCACATTCAAAGCGGTTAGTTCGCCATTTTGACCTGGATATTAACCGTGTACCTTGTGTTGTGAAAATATTCAACTTTTATTTCAAATTTTATGATAATCTGTATACCTTGTGTTGTGAAATTATTCAACTTTGATTTTAAATTTTATGAACCAGGATCATCATTATGCATCTGTTGACGTTAATGTTTGAATGAGTATATATTATATTGATATATAATATTGTCATTGTTATCCTGTATTCCATTCTACAAAGAAATTATACTAAAATTCTTAAATGCCACTCTTGATTTTTTTAAAATTTCAATTAGAGATAGGAGATTCAACCTCCACACAACATGCGAACTCAATATAGTAATTAATCTTGAAGCCTTAAATATAACAAAATGAGTTAACTAAAATTTTGATATATTTATAATTTGAATTTATATGGATTTCTGAACCATTGCAAAGCATGAACTCTATACATATCCATTCTAAGCATCACCATGAGAAAAATAAATTAACCAAAAGATATATATAAATTTTGTTATTTACGTTGGATTCAGTCTTCGTTACTAAAAACAAAGTCTTCATTTTAATTTATTTGAATAATCTTTTACACAGTGGCGGGTCTAACTCCACACTTTTATTTCTATTCTTCATATACAAAATTTCAAATTTATAGATTTATTTTTATAATAGTAATTAATCTTTGCTTGCAAATGGAGAAAAGAAAGAAGAATAAAAGAAATGCATAGACAAATTTGAAAGAATTCTTTTAGTAAGAGTATAAATTGATCCATTTGTAAAAGTTCAGATTTTTTATTGATGCAAATATAAATTTCACAAGAGGTTTATTCTAAGGAGGTAAGTTGATAAAATTATTAGTGTTTAAGACGTAAACAGTTCCTACTCAATTAATTATAATTGTTTGAAGGTAGTTGATTTTGTAAGCTTCAAATTGTTTATCGGTTCAGTTCCCACAATTTTAATTTTCCTTTAAGAAAAGATGGTTTCTATAGTAAATGGAGTGACAAATGGCGTTACACTATATGCTTACAACTTTAAACATTTTCATACAAAATGATTCTTGTAGATCCTTGCTGATGAAATATAAATTTAAAGTTTAATGTTTCTAAAAGGAACATGAATTGATATTCAAATCAAAAAATGACAAATAACTTGCTTTGATTTGAAAGAAGCCATGGGAGAACAGATTTGCAAGTGCAAGCTTTCAACTTTTCTAATGTTCTTGACAGCCATAGCTATGTTTCCAAGAAAATTATTAGCAATCGATAGCATAAAAGCAGGGGAATCCATTAATGGCAGCACCCAGATATTAGTTTCATCTCAACAGAACTTTGTATTGGGAATCTTCACTCCTCAAGGCTCCAAATTCAAATACTTAGGAATATGATACAAAAACATCGCACAAACTGTAGTATGGGTTGCAAATAGAGATGACCCACTTTATAAACTCCTCTGCCAAATTAACAGTCAATAAAGAAGGAAATGTCATTCTTCTCATGAAACACAGATGGAGTTTTATGGTCTTCCCCTTCTCCAGGATCAATGAAACACCCCATAGCTCAACTCTTAAACACAGGTAATTTGATTTTAAGAGAAGGAAAGTTGAAGTTTATCCTGTGGCTATGGCTTCACTTATAGGCTGCTTGGTCTTAGTGGTTTGGTTTATCCTGTGGCGGAGAAGGAAAGTTGAAGCTAAACCTTTCTCCTACTTTAGTATATGTGGATGATTAATAACTAGTTATTCTATCAACTGTTCAAATGTATGATTTCATTTTTCTTTCCTATCTTCAAAATTTTGTGAAGTGTTTAACTTCAGGTGAAATTCGAACTCCAGAGAAAGAAGTAGCTGAAATGCCACTCTATGATTTTCTTGAGATAGAGACAGCCACAAATAATTTTTCTCCCTCTAATAAGATAGGTGAAGGTGGCTTTGGTCCTGTATTCAAGGTATTTCTTTTCATTTGCTAGTGTTCTTCAATCATTTCATAAACTCTAACTTTTCATTTTCATAAAAGACTTAAAAGTTTTGAATATATACATACATATATGTATACTCACTCACAATAAGACATGCTACACATTGCAGGGAAATCTTCCATAA ATGGCTTCTTTCACATTCAAAGCGTGTTTAACTTCAGGTGAAATTCGAACTCCAGAGAAAGAAGTAGCTGAAATGCCACTCTATGATTTTCTTGAGATAGAGACAGCCACAAATAATTTTTCTCCCTCTAATAAGATAGGTGAAGGTGGCTTTGGTCCTGTATTCAAGGGAAATCTTCCATAA ATGGCTTCTTTCACATTCAAAGCGTGTTTAACTTCAGGTGAAATTCGAACTCCAGAGAAAGAAGTAGCTGAAATGCCACTCTATGATTTTCTTGAGATAGAGACAGCCACAAATAATTTTTCTCCCTCTAATAAGATAGGTGAAGGTGGCTTTGGTCCTGTATTCAAGGGAAATCTTCCATAA MASFTFKACLTSGEIRTPEKEVAEMPLYDFLEIETATNNFSPSNKIGEGGFGPVFKGNLP* Homology
BLAST of Chy12G215940 vs. ExPASy Swiss-Prot
Match: Q9SXB8 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-07 Identity = 23/54 (42.59%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy Swiss-Prot
Match: Q9SXB5 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11303 OS=Arabidopsis thaliana OX=3702 GN=At1g11303 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-07 Identity = 23/40 (57.50%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy Swiss-Prot
Match: O64782 (G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana OX=3702 GN=SD129 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-07 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy Swiss-Prot
Match: O64781 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS=Arabidopsis thaliana OX=3702 GN=At1g61390 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-07 Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy Swiss-Prot
Match: O64778 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana OX=3702 GN=At1g61420 PE=3 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 1.9e-07 Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy TrEMBL
Match: A0A1S4DSR7 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103489234 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.1e-11 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy TrEMBL
Match: A0A6J1CE24 (Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=LOC111010698 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.6e-11 Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy TrEMBL
Match: A0A6J1CF73 (Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=LOC111010698 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.9e-10 Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy TrEMBL
Match: A0A6J1CDK0 (Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=LOC111010698 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.9e-10 Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Chy12G215940 vs. ExPASy TrEMBL
Match: A0A0A0LUE1 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071180 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
BLAST of Chy12G215940 vs. NCBI nr
Match: XP_016899037.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Cucumis melo]) HSP 1 Score: 76.6 bits (187), Expect = 2.14e-14 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Chy12G215940 vs. NCBI nr
Match: XP_022139896.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Momordica charantia]) HSP 1 Score: 76.3 bits (186), Expect = 2.93e-14 Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Chy12G215940 vs. NCBI nr
Match: XP_011652927.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 4.00e-14 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Chy12G215940 vs. NCBI nr
Match: XP_038895044.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Benincasa hispida]) HSP 1 Score: 75.1 bits (183), Expect = 7.46e-14 Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of Chy12G215940 vs. NCBI nr
Match: XP_023519602.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 74.7 bits (182), Expect = 1.02e-13 Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Chy12G215940 vs. TAIR 10
Match: AT1G11300.1 (protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding ) HSP 1 Score: 56.6 bits (135), Expect = 8.0e-09 Identity = 23/40 (57.50%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of Chy12G215940 vs. TAIR 10
Match: AT1G11330.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 56.6 bits (135), Expect = 8.0e-09 Identity = 23/54 (42.59%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Chy12G215940 vs. TAIR 10
Match: AT1G11330.2 (S-locus lectin protein kinase family protein ) HSP 1 Score: 56.6 bits (135), Expect = 8.0e-09 Identity = 23/54 (42.59%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Chy12G215940 vs. TAIR 10
Match: AT1G61380.1 (S-domain-1 29 ) HSP 1 Score: 56.2 bits (134), Expect = 1.0e-08 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of Chy12G215940 vs. TAIR 10
Match: AT1G61390.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.0e-08 Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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