Chy12G212410 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAAGCTTTATTCGTCTTGGATCCTCACCATTGTTCTTATCATTGCAGGTTCTCTTCTACTTCTGAATTATGTATAATTATTGCCAGCATCCATATGTTGTACATTTTTTAAATGAAAAATACCATATTTATAGTGGCTAAGTATATTTCACATACATTGTGGTGCAGTTGCAATGATTTCGGTACCTCAAGAAGCCTTAGCCGCTCGATGTCAAGACATATTGTATAATAGTGGATGCACACTTGCTGATTGTGGGCAAAAATGTTGGGAGAAGCACCATGATGCCTCCCGTCAGTGCATACCAACTGATCCTGGCCAAACTATCTACGCTTGTTATTGTTTCTATAATTGTGGTTAA ATGACAAAGCTTTATTCGTCTTGGATCCTCACCATTGTTCTTATCATTGCAGTTGCAATGATTTCGGTACCTCAAGAAGCCTTAGCCGCTCGATGTCAAGACATATTGTATAATAGTGGATGCACACTTGCTGATTGTGGGCAAAAATGTTGGGAGAAGCACCATGATGCCTCCCGTCAGTGCATACCAACTGATCCTGGCCAAACTATCTACGCTTGTTATTGTTTCTATAATTGTGGTTAA ATGACAAAGCTTTATTCGTCTTGGATCCTCACCATTGTTCTTATCATTGCAGTTGCAATGATTTCGGTACCTCAAGAAGCCTTAGCCGCTCGATGTCAAGACATATTGTATAATAGTGGATGCACACTTGCTGATTGTGGGCAAAAATGTTGGGAGAAGCACCATGATGCCTCCCGTCAGTGCATACCAACTGATCCTGGCCAAACTATCTACGCTTGTTATTGTTTCTATAATTGTGGTTAA MTKLYSSWILTIVLIIAVAMISVPQEALAARCQDILYNSGCTLADCGQKCWEKHHDASRQCIPTDPGQTIYACYCFYNCG* Homology
BLAST of Chy12G212410 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37 Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0
BLAST of Chy12G212410 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.7e-33 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Chy12G212410 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Chy12G212410 vs. ExPASy TrEMBL
Match: A0A0A0KYP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507400 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14 Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of Chy12G212410 vs. ExPASy TrEMBL
Match: A0A4Y1RT05 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_019451 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.4e-13 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Chy12G212410 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 163 bits (412), Expect = 1.57e-50 Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0
BLAST of Chy12G212410 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 150 bits (379), Expect = 1.87e-45 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Chy12G212410 vs. NCBI nr
Match: KAE8649772.1 (hypothetical protein Csa_012405, partial [Cucumis sativus]) HSP 1 Score: 103 bits (256), Expect = 6.93e-27 Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Chy12G212410 vs. NCBI nr
Match: BBH07492.1 (hypothetical protein Prudu_019451 [Prunus dulcis]) HSP 1 Score: 81.6 bits (200), Expect = 7.90e-18 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Chy12G212410 vs. NCBI nr
Match: CAB4286917.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 80.9 bits (198), Expect = 9.32e-18 Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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