Chy12G212230 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCTGTAGAAGAGGACCACAACCCTAAAATGGATCCTCCCTGTTCCTCTTCCGCCTGCAATCCTCCTGAACCTCCCCTCTCCAAGAATGCCCGGAAGAAGCTTCTGAAGCAACAACGATACGAAGCGAAGAAAGCGGACAAGAAACTTCAGGCTAAAGAGCAGAAGAAGAAAGACATCGAGCGCAAACGGAAGGAATGGGAAGAGAAACTGGCCAGTGTTACGGAGGAGGAAAGAGCCAAACTGATCGAGTCTCGGAGAAATCTGAGGAAGGAGAGGATGGGGAAGAGGTCGGAGGACAGGGAGAAGAAAATTGAGAGACTCAGCACCGCCAGAGATTATGGCCAAAATATTGTCATCGACCTTGAATTTTCTCACCTCATGAACCCTTCGGAGATTCACAGTCTTGTTCAGCAGGTATTTTTTTCTTGTTACTCACACTTCACTTGGTTGATTAACTATTTCTGGTGCGAATCGAATACTTTTTAATACTATATATATCTATTTTTAATTTTTTACTTATAAAATGCTGTCTATATTTAAGAGGTTTGTTAAATGTTTCTGGTAGATGGAAATGGAATGAAGGGCTTCTTCTATGGTGCCCTTTTAGAAGTGAAATTGGTTGTTATTCTTGGAAGACAGTTTCTTAGCCAAATAGTTTAAAAAGGCGAGCCTTGGCAGTTAGTAGTTGATAAAGTAACAATTGGTTGTTTTAGTCTATTACTTGGAAAAGCACCAAAGGCTGCCTGAGATAACACAAACGCACGACTTGAACTCCTCCTCCCATCATTTCAATCTCCCAGCTTAATTACTTACGAAATTCGATTTTCTTATTTTTATTTCCCACTTTTGTAGTGTTCACCCATCATTTTTTGTCTCTTTTTGCAAGTAATAGAAGATCCTTCCAGTATCCCAAAAAGATGCAACTGCGTTGGATTCTCCTGAAATCTTGTTTCTTGCAGGTGAATGCATCAAACTACCCACAATATGGCTAATGGCATTCCTATCACCAAGCTCTTGGAAGATGTTTTAGTCTATTACTTTTCAGAAATTTGTATGCACGATGCTAATCTCCAGTCTCATAACATAGTGGTTTCAGTTGAAGAATTGGTTAAATTTTTTGTCTTGGATATGCATTCAACCAAATGAAGTTTCCTTATAATCCTTAGTGTGTTGGATAAATTCCCCAAACATTTTGACGATGAATGAAAGGTTTCTATAGATCATCTATCAAGTATTCAAGTGGGATATTGCATACTTTGATCTGAAAATTACCTGCTTTGCCTACAGCTTTAGACACCACTTCTAGTCTGCAAGATACCCTACTGACTTTCTAATATGGTGCATTTGCAGATGCTAAAAATGTTAATGGAGTCCACTTACCAATTAAATGAAATGGAAACTGACCAATATAATGATATACATTTGCAGGATAGTGGGATATCCTACTGACCAGTTGGAGCAAGCATTATTCTTTTTTCTTTTTTCCTTTTATATTCGTGAGTGTTCGGGCTAGCACCCGCACACCTAAACTAATTATACAGAACCCACCTGATCCTACGACATTTGGGTGTCAAGGAAACTTGTTGGAAATTAATCCTTGGGTAGATGACCACCATGGGTTGAATCCATGACCTCTTAGTTAGTTATTGAGATTATGCCTTCCTTTATACCACTAGGCTAACCCATGATGACTAACAATCATTATTCGTTTGATCTATCTCTCACATTGAGGAGTAGCTTAAGCTTCTACTGTGGGATTCTTATCTTCTGTTTCCAACATTAGAAGGTTGTATGTATAAGAAACAATCATCGACTTGTAATTACAAAAGAAAAGAAAACTATGTGCCGAAGGAATAACAAAAAACACTTCAATTGGGGCATAAGAGAAGTGAGGTTATAGGAGATAAAGAGAAGGTTAAGTTTTACACTAACAGAGCATTAAAGCAATATGTATGATTTACATCAATGTAAATTTTTTGACCTTGTTTCACCGTTTTTAGGGGGAAAAAACCCTTAAAAAATGATGAAAATGAAGTTAATCTTCCCAAAAGAGTTTCCTATTTTTTATTTTTTCTTCAAATAATATTTACTTATTCATTTTAATGGATTTTATGAGGGACCATTAATGTATTTGTTCATATTCATCCTCGGTGTTTTTTAAAATATAGGCCGTTCTTGCCCTTAGATGCAGAATTCGCATACAAATGATTTTCCATAGTAAAGCCACCAACAGATTTGAAAATGTGATCTCTGGGGGAAGTGTTATTTATCCTTGATGTTGAGTTACTTATCCCCTGGTCTATTAATGTCACATACTTCCAAGATTGACATGTGAGATTTCAATGTTTACTCCATCTCTATTGGTTCTGTGATCCACCTTTGCATACCTACTAGCCACCTTGATCTTCAACCAATCAAATGTTTGACTAATCTCACCCTGTCAAAAGACTCGAGAACCATTGGAAGATGGAGACAAGAGAATAAAGAAAAAGAGGAGAGAGCATCATCGGAGTCACCCTTTTCAAAATATGAACTTTTTACGTTTTTAATAAAAGCATAAATTTATAGGTTCGAATTTAACTCTGAATCTTACAATTATACAAGATTTCTAATGTGAGAATATAAGTTTATATTGCACCTAAATGCACGGTACTCCTACAAAATGTATGATGGGCAGTATTTAATTGGAATAGACTATGATGACTAAGATGGAATATTTTTTGGAGAAATAAAAATGCATAGCATGACACATTTTACTGAGTACTTTTCCTACATTAGTTAGTTATCATGCCAAGGCATTCTAAAATACGTCATCATCAGTATGTCATAGCATTTCATAGCTGATTTATTCTTGGTTCACATTTAGTTATGGTCAGGATGCTGCTTTTTGTTGTGATGTTGGATTGGATCTTTTTCAATATACAAGCGATTCATTTCTGAAGACTACTGAAAACTTTGACATTTTATCCTCATGCAGCATTCTTCTTTTGTATGTTAATTCTCAAATTAATTTAAGTAGTAATGATTCAATGATCTTTTGGAAACAGCAAGTTTTCTGAGTATCTTTATTGGGTAAAAACCTGCAGATAATGTATTGTTATGCTGTGAATGGAAGATGTCCTTCTCCTTGTCATCTCTGGTTGACTGGGTGTAATGGAGAAATGGAAACCCAACTGCGAAGGCTTCCAGGATTTGATAAATGGATCATTGAGAAGGAACGTAGATCATACATAGATGCTTTGCAAGAGCAGAAGGAAAATCTGGTATATCTTACAGCAGACTCGGAAACTGTGCTTGATGACCTCGATCTAAAGAAAATTTATATCGTTGGTGGGTTAGTTGATCGTAACAGATGGAAAGGGATTACCATGAAGAAAGCACAAGAACAGGAAATTCAAACAGCAAAACTTCCAATAGGAAGTTACTTGAAGATGTCTAGCTCTCAGGTATATCTTGGTTTTTACATGCTAATTACTTTTATCGACATTTTGGACTTTAAATTCTGTCATCCTGGACTTACAAAATGGGAGATTAAGAATACAAGTGTGCTCCAATCTTGTAACTACTTATTTTTGTAGAAAAATGAAAGAATGTTGAAAGGCATACAAGAAAAGGAACATCTCAAAAAGGAGCCTCAATAAAAGCTACAAAATAGAGAACTCAAACCAGCCAGAATAAGACCCAACTGACAATTAGAAAACTCTTGTGCGCAAACAGACATTGAATTTAGCAACTTCCCAAATCTCTTCCCGAAACCTTTTAACCCCTTTGAAAATTCTACCATTCCTCTTTAACCAAATACCCCACAAATAGCAAAAACGGGATTGCCCCTGGGGCCAAAGAACCTCTCCATCATAGAATAACATTCACGGTCAGGTCCTTAATAGATCGCAAATGACTCCAAAAAAGTGAATCCAAATGGATTGCGTGAACCGACTATACCAAAGGATATGGTCGGATCCTTAAGATGCTTTAGACAAAATGCATGAATGCAGCACTAACAAAAGGAAAAAGAATCCCAAGTATCAACTTTTCTATGTGATGCTGAGCATTGAATTTGACTTCTTTGAGATCTCAACCTTCCAAAAAGGGAAGAATGAAAGGGGGCTCAAGGAAGGGTGAAGGGACGCATGATAGATGGAAGAGGAAAATATATGTAAAGCTCCTGAAGGGGGCTCACAACTCAGTCTTCTCATTTGATGAAGGATGATGAAAACCAAAATGAATATAAATTTCCTGAAAAAAACGGCAAAACTGAAGCTTGCATAATGTAACCTCCAAACTGCAAAATTGCAAACACGTTGAACGAAGCATGACCCAAAGAGGCTTATCTCTTATGATCCCACCCAAAATTCCTCTTAAAAGTTAATTATTTGATTAATCTCATGAAAACATTTCATAAATAGGAAAAATGGGAAACCCTAAAAAGCTTATAGACCTATGGGTTTTATATTAGAGACTTTAACCCCCACAATTTGAGACACTCAAACAGGTGAGTGGAGCATACTTGCTCATAATAACCATATGCCACAAAGCGTTGGGCTCGGTACCGTACCCACTGAGGCTTCCTTTTGCAATCTCCAAGTTTCCAACAAGTAAAGTTAAAGCCCCACGATTCAACTTATTAGACAATGTCAAGTACAGTGCTCCTTTTCGACAGATTTATGGATATGGTTTGTCTTCTGCTTTTTATTGTGCAGGGGTAGAGCACCCTTTCAATCATTTCAGTTTATCTTATTTAATCTCCGATTGAGAATACTCTCTGTATGGTTTTCTTCTTTTCGTTGATCAATGAATGTTTCTTTATTTAAAAACAATGCCAATAACAAATAGGAGCTGAGGCATATCTGTAGGCTGAAAAAGTGATTACAAAAGAAAGGCTCTTAAACAAATTTTGTAGGGCTGTAAGTGGGTCAATTAGGCTTGTTTCTTGGCCAAAAAACAAAGTGAGCTTAGGATTTTCGGATTTCCGACCTACAAGATTACAAATTGACTTCTTATATTTAATAAGTTATCTTACAATAGTCATTTCCAGGTCCTTACTGTGAACCAAGTCATAGAGATTCTACTCAAATATTTGGAAACAAGAGATTGGAAGGATTCTTTCTTTGAGGTTGTTCCTCAAAGAAAAAGAAGTGGAGCTGATTCAAACAGTGACCATCCAGTAGATGGGGAAGAAAATGGAGATGGAGACAACAAGAACGAGACGAAGAAGACCAAGTGTGATGAAGTATCTTCCAGTGACCATAATTTGTAA ATGGAGGCTGTAGAAGAGGACCACAACCCTAAAATGGATCCTCCCTGTTCCTCTTCCGCCTGCAATCCTCCTGAACCTCCCCTCTCCAAGAATGCCCGGAAGAAGCTTCTGAAGCAACAACGATACGAAGCGAAGAAAGCGGACAAGAAACTTCAGGCTAAAGAGCAGAAGAAGAAAGACATCGAGCGCAAACGGAAGGAATGGGAAGAGAAACTGGCCAGTGTTACGGAGGAGGAAAGAGCCAAACTGATCGAGTCTCGGAGAAATCTGAGGAAGGAGAGGATGGGGAAGAGGTCGGAGGACAGGGAGAAGAAAATTGAGAGACTCAGCACCGCCAGAGATTATGGCCAAAATATTGTCATCGACCTTGAATTTTCTCACCTCATGAACCCTTCGGAGATTCACAGTCTTGTTCAGCAGATAATGTATTGTTATGCTGTGAATGGAAGATGTCCTTCTCCTTGTCATCTCTGGTTGACTGGGTGTAATGGAGAAATGGAAACCCAACTGCGAAGGCTTCCAGGATTTGATAAATGGATCATTGAGAAGGAACGTAGATCATACATAGATGCTTTGCAAGAGCAGAAGGAAAATCTGGTATATCTTACAGCAGACTCGGAAACTGTGCTTGATGACCTCGATCTAAAGAAAATTTATATCGTTGGTGGGTTAGTTGATCGTAACAGATGGAAAGGGATTACCATGAAGAAAGCACAAGAACAGGAAATTCAAACAGCAAAACTTCCAATAGGAAGTTACTTGAAGATGTCTAGCTCTCAGGTCCTTACTGTGAACCAAGTCATAGAGATTCTACTCAAATATTTGGAAACAAGAGATTGGAAGGATTCTTTCTTTGAGGTTGTTCCTCAAAGAAAAAGAAGTGGAGCTGATTCAAACAGTGACCATCCAGTAGATGGGGAAGAAAATGGAGATGGAGACAACAAGAACGAGACGAAGAAGACCAAGTGTGATGAAGTATCTTCCAGTGACCATAATTTGTAA ATGGAGGCTGTAGAAGAGGACCACAACCCTAAAATGGATCCTCCCTGTTCCTCTTCCGCCTGCAATCCTCCTGAACCTCCCCTCTCCAAGAATGCCCGGAAGAAGCTTCTGAAGCAACAACGATACGAAGCGAAGAAAGCGGACAAGAAACTTCAGGCTAAAGAGCAGAAGAAGAAAGACATCGAGCGCAAACGGAAGGAATGGGAAGAGAAACTGGCCAGTGTTACGGAGGAGGAAAGAGCCAAACTGATCGAGTCTCGGAGAAATCTGAGGAAGGAGAGGATGGGGAAGAGGTCGGAGGACAGGGAGAAGAAAATTGAGAGACTCAGCACCGCCAGAGATTATGGCCAAAATATTGTCATCGACCTTGAATTTTCTCACCTCATGAACCCTTCGGAGATTCACAGTCTTGTTCAGCAGATAATGTATTGTTATGCTGTGAATGGAAGATGTCCTTCTCCTTGTCATCTCTGGTTGACTGGGTGTAATGGAGAAATGGAAACCCAACTGCGAAGGCTTCCAGGATTTGATAAATGGATCATTGAGAAGGAACGTAGATCATACATAGATGCTTTGCAAGAGCAGAAGGAAAATCTGGTATATCTTACAGCAGACTCGGAAACTGTGCTTGATGACCTCGATCTAAAGAAAATTTATATCGTTGGTGGGTTAGTTGATCGTAACAGATGGAAAGGGATTACCATGAAGAAAGCACAAGAACAGGAAATTCAAACAGCAAAACTTCCAATAGGAAGTTACTTGAAGATGTCTAGCTCTCAGGTCCTTACTGTGAACCAAGTCATAGAGATTCTACTCAAATATTTGGAAACAAGAGATTGGAAGGATTCTTTCTTTGAGGTTGTTCCTCAAAGAAAAAGAAGTGGAGCTGATTCAAACAGTGACCATCCAGTAGATGGGGAAGAAAATGGAGATGGAGACAACAAGAACGAGACGAAGAAGACCAAGTGTGATGAAGTATCTTCCAGTGACCATAATTTGTAA MEAVEEDHNPKMDPPCSSSACNPPEPPLSKNARKKLLKQQRYEAKKADKKLQAKEQKKKDIERKRKEWEEKLASVTEEERAKLIESRRNLRKERMGKRSEDREKKIERLSTARDYGQNIVIDLEFSHLMNPSEIHSLVQQIMYCYAVNGRCPSPCHLWLTGCNGEMETQLRRLPGFDKWIIEKERRSYIDALQEQKENLVYLTADSETVLDDLDLKKIYIVGGLVDRNRWKGITMKKAQEQEIQTAKLPIGSYLKMSSSQVLTVNQVIEILLKYLETRDWKDSFFEVVPQRKRSGADSNSDHPVDGEENGDGDNKNETKKTKCDEVSSSDHNL* Homology
BLAST of Chy12G212230 vs. ExPASy Swiss-Prot
Match: O14214 (tRNA (guanine(9)-N1)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=trm10 PE=1 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 4.1e-35 Identity = 111/302 (36.75%), Postives = 172/302 (56.95%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy Swiss-Prot
Match: Q8C1Z8 (tRNA methyltransferase 10 homolog A OS=Mus musculus OX=10090 GN=Trmt10a PE=2 SV=2) HSP 1 Score: 147.1 bits (370), Expect = 3.5e-34 Identity = 100/290 (34.48%), Postives = 155/290 (53.45%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy Swiss-Prot
Match: Q8TBZ6 (tRNA methyltransferase 10 homolog A OS=Homo sapiens OX=9606 GN=TRMT10A PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.6e-33 Identity = 110/331 (33.23%), Postives = 178/331 (53.78%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy Swiss-Prot
Match: Q3MHI8 (tRNA methyltransferase 10 homolog A OS=Bos taurus OX=9913 GN=TRMT10A PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.0e-31 Identity = 105/321 (32.71%), Postives = 172/321 (53.58%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy Swiss-Prot
Match: Q66JJ4 (tRNA methyltransferase 10 homolog A OS=Xenopus tropicalis OX=8364 GN=trmt10a PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.2e-30 Identity = 113/348 (32.47%), Postives = 183/348 (52.59%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy TrEMBL
Match: A0A0A0LYJ3 (SAM-dependent MTase TRM10-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173210 PE=4 SV=1) HSP 1 Score: 624.4 bits (1609), Expect = 2.7e-175 Identity = 325/333 (97.60%), Postives = 327/333 (98.20%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy TrEMBL
Match: A0A5D3CW30 (tRNA (Guanine(9)-N1)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00280 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 2.6e-165 Identity = 307/327 (93.88%), Postives = 316/327 (96.64%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy TrEMBL
Match: A0A1S3CL37 (tRNA (Guanine(9)-N1)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502202 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 2.6e-165 Identity = 307/327 (93.88%), Postives = 316/327 (96.64%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy TrEMBL
Match: A0A6J1I7W5 (tRNA (guanine(9)-N(1))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111471663 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 8.6e-153 Identity = 286/331 (86.40%), Postives = 307/331 (92.75%), Query Frame = 0
BLAST of Chy12G212230 vs. ExPASy TrEMBL
Match: A0A6J1EPG7 (tRNA (guanine(9)-N(1))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111434383 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 3.3e-152 Identity = 286/331 (86.40%), Postives = 306/331 (92.45%), Query Frame = 0
BLAST of Chy12G212230 vs. NCBI nr
Match: XP_004139517.1 (tRNA (guanine(9)-N1)-methyltransferase [Cucumis sativus] >KGN65001.1 hypothetical protein Csa_022718 [Cucumis sativus]) HSP 1 Score: 624 bits (1610), Expect = 7.29e-225 Identity = 325/333 (97.60%), Postives = 327/333 (98.20%), Query Frame = 0
BLAST of Chy12G212230 vs. NCBI nr
Match: XP_008464275.1 (PREDICTED: tRNA (guanine(9)-N1)-methyltransferase isoform X1 [Cucumis melo] >KAA0042332.1 tRNA (guanine(9)-N1)-methyltransferase isoform X1 [Cucumis melo var. makuwa] >TYK15458.1 tRNA (guanine(9)-N1)-methyltransferase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 591 bits (1523), Expect = 1.18e-211 Identity = 307/327 (93.88%), Postives = 316/327 (96.64%), Query Frame = 0
BLAST of Chy12G212230 vs. NCBI nr
Match: XP_023520714.1 (tRNA (guanine(9)-N1)-methyltransferase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 554 bits (1427), Expect = 5.76e-197 Identity = 289/331 (87.31%), Postives = 308/331 (93.05%), Query Frame = 0
BLAST of Chy12G212230 vs. NCBI nr
Match: XP_038893739.1 (tRNA (guanine(9)-N1)-methyltransferase [Benincasa hispida]) HSP 1 Score: 553 bits (1426), Expect = 9.13e-197 Identity = 295/337 (87.54%), Postives = 312/337 (92.58%), Query Frame = 0
BLAST of Chy12G212230 vs. NCBI nr
Match: KAG6583717.1 (hypothetical protein SDJN03_19649, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 553 bits (1425), Expect = 1.16e-196 Identity = 289/331 (87.31%), Postives = 308/331 (93.05%), Query Frame = 0
BLAST of Chy12G212230 vs. TAIR 10
Match: AT5G47680.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 395.2 bits (1014), Expect = 5.2e-110 Identity = 220/331 (66.47%), Postives = 263/331 (79.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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