Chy12G209090 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G209090
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ran-binding protein 1 homolog a
Location	chrH12: 3363570 .. 3366521 (+)
RNA-Seq Expression	Chy12G209090
Synteny	Chy12G209090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCTCCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGCGGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGCAGTCAACGTTACCACTGGTGAAGAAGATGAAGACGCAATTCTCGATCTGTATGATTTTTTTTTTTAATCTACTACTTTTTCTGATCTGCTTGCTGTTAATCTGATTTTTTTCATGTGGGTTTTTTTCGTATTCGTTGTTTTAGGAAATCCAAACTGTACCGATTTGATAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAGGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTTGGTTCGTTCTTGGTTCTCTGCTTGTTCTTTCGCGCATATATCAAGCTCTTTTGGCTTTATTTTGTTTTCTTTTCTTCTTGATTTAGCTTTAGTTCTTCAATTTTATCGTTTGATTTGTCGTGATTGTAGTACTTCCATCAATGACCGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGATAGTGAGTACAACTCTGAATCTTTTTTCTCACTAAATCTTGGTTGTAGATGGATTGATAGGCTATTCTAGACTTTGGATTCATTGTTATCTGGTTGTGGGCAATGCTAGTGTTAAACTTGAATCTTATATTGTTTGACGTTTTGTGTTTTCTTTTCTCCTTCCAAATAAATTATATGTGAGAGCTCTTGCGTGGTTGTGCCCGGTTCTAAGTATCACTAGGACAATTTTTTTCACTCACAATTTAATCTATTTTTTTCTTTGTTGTTTTGTATCCACTTTTTTATGCGGTTTGGTCTGTACATGTTTTCATCACAAGAAATTACTGTATTGTTGTGGTATGTTTGAAGTTGAACGTTTTCCCATGCCTATCAATACTTGGTGCTATTAAAAGTCAAGAATGGGATTGATTCTTACAATCCATAGTAGTTTTAATCCGTTCATAATGGTAACTTTAACCACGAAACTTTTACTTTTCTGCTTATCTTTACTGATTATTGTCTTTATCCACTATGAATATAGTTGTTGTTATTTCATTAACAGTTGTTTTCACTTTTCTAAAAATGGGAAGTTCTATATTCATAGGTCCATCTTCCACCCAGTTTCTTCAGTTATCTAGTTCTAAACATGTCAAAGTTGATTGCCAGTTGTTTTGGCAACGGAAGAGTTGGAGTCAGTGCCTGAAAAGAGAAAGTATAATATAGAATTACAATTTTTTAAATGATAGTTCGCATATAAACTTTGATAGGAAAAAGGTGGTGAAAGGTGAGTGGTTTCATTGGTGAATTACTGGTTGTGATTTTACTTTGAGAGGGTTTTAAGTAATTATACTTGGAAGGGAAAAAGCTGCAAGATAGTAATGTTACAGATGAAACTTTCCCAGATAACAATTACTTGTGGCTGCTGTTGCCTATCGAGGTTTGTAATTGTTAGATTGGATATGTTCTGGGTTTTCATCTTTAAATGCAGTGGGCCTCTCTGCATGAGATACATCAAAACTGTTTGATGCCAGCTTTGGTAGTTGTAATTTTATTTAGACCCCCCTTTCCATTCATCAGAAGCTTTCAATGATGTCTCCAATGACTATTAGTTCAAATTTATCTAGGAATTAGGTTATTTGTCGTTGTAACTCAATACAATAGGAAACCCTGGATAAATATACATTATCCAACAGAGTGGCCTTTTTCTCTTCCTTTTTTGGGGATGGTGAGTGATTTTGTCTTTTGAATTAATATAAGCATCATCTCTGCCATGGATTCATTTCTTTGTGTCAGATAGGAACTCTATTAACTTCTAAATTTACTCTAATCCAGGGTCTTTGAGTAATCTTTTATTAGTTCGTGCTTTTGTAGTTACTAAATAATCAATCCTGACAACGTACAATATTGAATTAGTTTATGCTCATATATGACTTACAAAGCATGGAGATAGGCTTTTGACTGCTTAAATATAAAAGACACAATGACATGCATTGAAACTATATGCTAAGAGGCTTTGACAGACTGCACATTTTTCATAATTTTTTCATTTGTACTGTGTTTGAAATGGGAACAATATGTTGTTACCATATGTATTGCACAGCCCTTCGGCTCACTTTATTATTTTTCTATTTATTTTACTTCTCCCACTTAAGTATCGTTTAGTCTGAAACGGTTTTACCTCTTGACATTATTGATTTCATTTGTTTCTTCAAAAGTGTCTATAATATCTCTGGGTTGTATCTGAGATGGTTTTGAAAAACTCAACAGTGCAATTTCTATGACTTTTGTACACATACTATTGAGCTTACAGAGAATGTTTTCCATCCAATATCTATTGAGCTTACGGAGAATGTTTTCCTATCCTTGTGGTTTATTAACTATGCTAGTCAGCTTCGTTTAAATAATGCAGTCTTTTCCACCCGTGTATCTAAATTTTTTCTTTGTACTGTAGACTGCAAAACCTTGATGGAAAAAAACGTTCCTAGAAGCCCTATTGTCCCAAAAGTAGACAGTTTATTAACTGTGCTAATCAACTTTCCCTCCCTTGGTTTTTCACTTTATTATTACTAACTTTTGTTCCGGGTATCATTAGACTGCAAGACCTTCATGGAAACATTTCAAGAAGTTGCAGAGTCCCAAAAGAAGAAAGTGGAAAATAAAGATGCATCAGCTGCAGCTGGTCTACTTGAAAAATTGAGCGTTGAAGATGAAAAGAAAGCTGAAGATAAATCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAG

mRNA sequence

ATGGCGAGCTCCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGCGGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGCAGTCAACGTTACCACTGGTGAAGAAGATGAAGACGCAATTCTCGATCTGAAATCCAAACTGTACCGATTTGATAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAGGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTTGTACTTCCATCAATGACCGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGATAACTGCAAGACCTTCATGGAAACATTTCAAGAAGTTGCAGAGTCCCAAAAGAAGAAAGTGGAAAATAAAGATGCATCAGCTGCAGCTGGTCTACTTGAAAAATTGAGCGTTGAAGATGAAAAGAAAGCTGAAGATAAATCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAG

Coding sequence (CDS)

ATGGCGAGCTCCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGCGGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGCAGTCAACGTTACCACTGGTGAAGAAGATGAAGACGCAATTCTCGATCTGAAATCCAAACTGTACCGATTTGATAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAGGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTTGTACTTCCATCAATGACCGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGATAACTGCAAGACCTTCATGGAAACATTTCAAGAAGTTGCAGAGTCCCAAAAGAAGAAAGTGGAAAATAAAGATGCATCAGCTGCAGCTGGTCTACTTGAAAAATTGAGCGTTGAAGATGAAAAGAAAGCTGAAGATAAATCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAG

Protein sequence

MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVEDEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD*

Homology

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BLAST of Chy12G209090 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.4e-78
Identity = 160/213 (75.12%), Postives = 180/213 (84.51%), Query Frame = 0


Query: 7   ERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGNQWKE 66
           E R+EEEA A EDEDTGAQVAPIV+LE V VTTGEEDEDA+LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFAD 126
           RGAGTVKFLKHK TG++RLVMRQSKTLKICANH V   M+VQEHVGNEKSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVEDEKKAE 186
           GELKDELFCIRF SI+NCKTFM+ F+EVAES+++K E+KDA+  AGLLEKL+VE E K E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVE-ETKTE 188

Query: 187 DKSEDKAEDT-PVKSKEEDKPEGEAGKSDAEKK 219
           +K+E KA +T   + K E+K E EA KS   KK
Sbjct: 189 EKTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

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BLAST of Chy12G209090 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 4.3e-73
Identity = 146/206 (70.87%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 5   DTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGNQW 64
           + E R+EEE  A EDEDTGAQVAPIV+LE V VTTGEEDED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDF 124
           KERGAGTVKFLKH+ +G++RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVEDEKK 184
           +DGELKDELFCIRF S++NCK FM+ F+EVAES+++K E+KDAS  AGLLEKL+VE EK+
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE-EKE 188

Query: 185 AEDKSEDKAEDTPVKSKEEDKPEGEA 211
           +E K  +KAE+       E+K   E+
Sbjct: 189 SEKKPVEKAEENKKSEAVEEKKTEES 213

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BLAST of Chy12G209090 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-72
Identity = 150/219 (68.49%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MASSDTER-REEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDK 60
           MAS++ ER   E+E    EDEDTGAQVAPIV+LE V VTTGEEDEDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETG+VRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+   E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EDEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKK 219
           E E  +E+K+++  E  P K  +E K E    K + EKK
Sbjct: 181 E-ENISEEKAKEAEEKEPAKEDKETKKE----KVEEEKK 214

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BLAST of Chy12G209090 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 72/160 (45.00%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 2   ASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDG 61
           AS++ E++  E    AE         PIVKL AV   T EE+E     +++KL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH- 121
           ++WKERG G  + LKHKETG+ RLVMR+ KTLK+CANHL++P M +  +VG+++S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
           A D ++GE   E F IRF + +N   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

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BLAST of Chy12G209090 vs. ExPASy Swiss-Prot
Match: P41920 (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YRB1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30
Identity = 69/159 (43.40%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 3   SSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGN 62
           + +  ++E ++AP + D        P+V LE V+V T EEDE+ +  +++KL+RFD D  
Sbjct: 46  TKEETKKEGDDAPESPD----IHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAK 105

Query: 63  QWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHAT 122
           +WKERG G  KFLK+K+T +VR++MR+ KTLKICANH++ P  T++ +VG+++S V+  T
Sbjct: 106 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 165

Query: 123 -DFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
            D A+GE +   F IRF S +N   F E F++  E  KK
Sbjct: 166 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200

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BLAST of Chy12G209090 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 220
           DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of Chy12G209090 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 220
           DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

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BLAST of Chy12G209090 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 220
           DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of Chy12G209090 vs. ExPASy TrEMBL
Match: A0A6J1HKC3 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464892 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKH+ETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 220
           DEK   KAEDKSEDKAEDTPVKS+E+ KPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKSEDKAEDTPVKSEEKGKPEGEAEKSDAEKKE 222

[Close]

BLAST of Chy12G209090 vs. ExPASy TrEMBL
Match: A0A6J1I4C6 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.5e-102
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 220
           DEKKAE K+EDKAE TPVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAE-KAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

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BLAST of Chy12G209090 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 415 bits (1067), Expect = 6.53e-146
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219
           DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of Chy12G209090 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (990), Expect = 3.44e-134
Identity = 205/219 (93.61%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219
           DEK AEDKSEDKAEDTPVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEK-AEDKSEDKAEDTPVKSEEKDKPEGEAEKSDAEKKE 218

[Close]

BLAST of Chy12G209090 vs. NCBI nr
Match: XP_022964941.1 (ran-binding protein 1 homolog a-like [Cucurbita moschata])

HSP 1 Score: 382 bits (982), Expect = 6.56e-133
Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKH+ETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAE---DKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219
           DEKKAE   DKSEDKAEDTPVKS+E+ KPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKSEDKAEDTPVKSEEKGKPEGEAEKSDAEKKE 222

[Close]

BLAST of Chy12G209090 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382 bits (980), Expect = 1.15e-132
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219
           DEKKAE K+EDKAED PVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAE-KAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 218

[Close]

BLAST of Chy12G209090 vs. NCBI nr
Match: XP_022970593.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 381 bits (979), Expect = 1.63e-132
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219
           DEKKAE K+EDKAE TPVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAE-KAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

[Close]

BLAST of Chy12G209090 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.1e-79
Identity = 160/213 (75.12%), Postives = 180/213 (84.51%), Query Frame = 0


Query: 7   ERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGNQWKE 66
           E R+EEEA A EDEDTGAQVAPIV+LE V VTTGEEDEDA+LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFAD 126
           RGAGTVKFLKHK TG++RLVMRQSKTLKICANH V   M+VQEHVGNEKSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVEDEKKAE 186
           GELKDELFCIRF SI+NCKTFM+ F+EVAES+++K E+KDA+  AGLLEKL+VE E K E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVE-ETKTE 188

Query: 187 DKSEDKAEDT-PVKSKEEDKPEGEAGKSDAEKK 219
           +K+E KA +T   + K E+K E EA KS   KK
Sbjct: 189 EKTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

[Close]

BLAST of Chy12G209090 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-74
Identity = 146/206 (70.87%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 5   DTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGNQW 64
           + E R+EEE  A EDEDTGAQVAPIV+LE V VTTGEEDED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDF 124
           KERGAGTVKFLKH+ +G++RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVEDEKK 184
           +DGELKDELFCIRF S++NCK FM+ F+EVAES+++K E+KDAS  AGLLEKL+VE EK+
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE-EKE 188

Query: 185 AEDKSEDKAEDTPVKSKEEDKPEGEA 211
           +E K  +KAE+       E+K   E+
Sbjct: 189 SEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of Chy12G209090 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 271.6 bits (693), Expect = 5.7e-73
Identity = 150/219 (68.49%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MASSDTER-REEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDK 60
           MAS++ ER   E+E    EDEDTGAQVAPIV+LE V VTTGEEDEDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETG+VRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+   E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EDEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKK 219
           E E  +E+K+++  E  P K  +E K E    K + EKK
Sbjct: 181 E-ENISEEKAKEAEEKEPAKEDKETKKE----KVEEEKK 214

The following BLAST results are available for this feature:

BLAST of Chy12G209090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	4.4e-78	75.12	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	4.3e-73	70.87	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	8.1e-72	68.49	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q09717	1.1e-31	45.00	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P41920	2.6e-30	43.40	Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Chy12G209090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVN5	2.2e-112	100.00	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXN6	2.2e-112	100.00	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4...	[more]
A0A1S3C5A9	2.2e-112	100.00	ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=...	[more]
A0A6J1HKC3	1.6e-102	91.89	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A6J1I4C6	3.5e-102	92.69	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534...	[more]

BLAST of Chy12G209090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457357.1	6.53e-146	100.00	PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi...	[more]
XP_023519267.1	3.44e-134	93.61	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964941.1	6.56e-133	91.89	ran-binding protein 1 homolog a-like [Cucurbita moschata]	[more]
KAG6583353.1	1.15e-132	92.69	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022970593.1	1.63e-132	92.69	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]

BLAST of Chy12G209090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	3.1e-79	75.12	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	3.0e-74	70.87	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	5.7e-73	68.49	RAN binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 2.5E-41 score: 153.3
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 36..154 e-value: 9.3E-40 score: 135.7
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.266335
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 9..172 e-value: 3.6E-53 score: 181.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..219
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 6..219
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 6..219
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 1.74703E-67 score: 202.028
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 28..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G209090.1	Chy12G209090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity