Chy12G208390 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G208390
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Copper transporter
Location	chrH12: 2722877 .. 2725486 (-)
RNA-Seq Expression	Chy12G208390
Synteny	Chy12G208390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAAAAACAACAGCAATCTTAAGTCTTTGTTTTGTAATTTTTCTTTCTGTTTCTTCCAAATCCGACGCTACCAATGTTTTACTTCCCACCCACGACGGCATGCACATGGACCCCCCGCCGCCGCCGATAGCTCCGACGAGCAGAGGCTCCGGCGATGACATGCACACTCACGATATGATGTCATCGGCCATGCACATGACTTTCTTCTGGGGAAAAAACACACAAGTTTTGTTTTCCGGCTGGCCCGGGGACCGGTCCGGCATGTATGCAGTGGCGCTGGTGTTCGTCTTTTTGCTGACGGTGGCGGTCGAGTGGCTGTCGTGTTGGCGGGTGATGACGGAGGTAGGGCCGAGAAATGTGGCGGCCGGAATCGTGCAGACGGTGGTACATGGGATAAGAATGGGGATTGCATATTTGGTGATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGTGGCCGTCGCCGGACATATGGTTGGGTTTTTGGTTTTTGGAAGCAGAGTTGTGAAGAAGGAGAAATCATCGGCGTACGATCAGGGAACTGCCGATCTTCCATCCAGGGTGTGCTGACTAATTATACATTTGATCATAATTTGTTACATTGTGCTTATAAACGATTCAAGTGAACTAATTTTAGTTATTTTGGATCTAATACTCTCTTTTTTTTATTTGAAATATTCATAGGGCTTTGTTGAGTTTTCTTTTTCATGAAAAAAAATATTCATAGAATCTAAAATTTGATTTATTATGTTAGAGTTAAAAAGCCGTTTATGCTTAAATATTTTTGCTCACTTTTTTTTTTTCTCTTTCCATATTTATCATTTATTAAATTTGGAAGTAAATTTATTTGGAGAGAACAATTACGGGGTTTATTTTGGTAACGTTTTAATTTCTTGTTTTCTGTTTTGTTTCCATTTTTTAAGAAATGTTCTCTATTTTTCGTTCTAAAAAAGTAGAAACGTTTCTCATTTTATAAGAAATTAATGGGAACATAAAAAAAATTTCTTCAATTTCGTTTCTCAATTATTTTTATTGGTTTTTTTTCCAATTATTTATGTTGGTTTCCTATTTTTTTTGTTTCCTATTTTATAAGAAATAAGAAACAATTATCAAACACACTTTCTGTTTCTGTTTTTTTTTTTTTTTAGAAACAAGAAGTAGAAACCATTATCAAACACAAGGAATAAGAAATAAAAGTAAAAACGTTAACGAACGTTGCCAAATAGACCTTACATTACTTTATTCTTGCTCCAATAGCAAATTTATAAATTTTGAGAAAAAAAAGTTAACCTTCAAAACAAAGAGAAGAAAAGGATTAAATTTGGTGCCAAGATTAGATGGAGAAAATCATGTAAAATAAAAAGGAATATTTTCTTAAGAAAATGATAATTTTTATGGTTTTTTTTAAAATGAGATACAAAACTGATATAAATATGATATTAAAATAAAAAAGAAAAAAAAAACAAAAATAAGAAATTCTCCAAAAAGTATTTACTAGTCTCTCCAATTTTTAGAATTTTAACCCAGGTGTGTTTTAGCAAACATGGGGTTCATTATATAATATGAATACTATGGATTAGTATCAACATCTATTTAATAACATTTATAATAGATTTTAACTTATCTTTATAAATAAACCCTAAACTTTTTTACTTTTGATAAGATGAGAGCAGACATGATATATATTGATTTTATGTTTTATATTAATCAAATATAAAATGATTATTATTAATTAAGTAATGGATAACTATAACTGTTTAATTAATTAATAACTAACTATAATGGGTCGTATTTATATGAAAATAGATTTTGATGGTTTATTAATGATAGATTAATATTTGTAACATGAATTAACCGTGATAAAGTTATTATATTAATATTTTTACAATTTTTTTTGAAATGTCGTTAATATACTTAAAATGTCGTAAATATTTTGTAGCTGTCTTTAAGTTAATTATTATTATTATTATTGTGACCTTTTGGCTTATCTATAAGATTAGGATTAGCCCACGTTACAATTGATTTTGGTAATATTATTGCTACTTTTTTATTTGGAGATCTATCTTACACACATCCTCTTGCTTTCCATATGCATATGTTTTAATGAATTAATTATGGATCTTATTTTCTTTTTATTCCGTTTCAAAATGGAGAGTGAAATTCTAATGTAATTTTTTTTTTTTTTTTGCTTTTATTTATTAAAATTAAGTCTATTTTCTTCCATTAATATCTTAAAAATACAACTTTTTAAAAGTTTCTTTTTCTAGTTTTCAAAATTTGACTTGATTTTTTAAAATCACTCATAAAATATAATAACGGAAGAAAGTTGAGGTAAAAGTAGTGTCTATATAGACTTAATTTTACAAGTAAAAAATAAAATGGATATTAAACGTTGGGACTAAGTCTTATACCAAATGATATTCTCCACCCTCTAGTTCAATACAGTCTTTTATTTATTTATTTATATATTTATTAAATATGTTTTTGTAGGGCAGAATGCCAATTGTTGATAGAAGAGGATTATTTAAAATAGGGTTTAGAGTAACACACTGTACTTAACCTTGAAGGTTTTGTTAAATGGTGAATTTGTAGATTTAA

mRNA sequence

ATGGAACAAAAAACAACAGCAATCTTAAGTCTTTGTTTTGTAATTTTTCTTTCTGTTTCTTCCAAATCCGACGCTACCAATGTTTTACTTCCCACCCACGACGGCATGCACATGGACCCCCCGCCGCCGCCGATAGCTCCGACGAGCAGAGGCTCCGGCGATGACATGCACACTCACGATATGATGTCATCGGCCATGCACATGACTTTCTTCTGGGGAAAAAACACACAAGTTTTGTTTTCCGGCTGGCCCGGGGACCGGTCCGGCATGTATGCAGTGGCGCTGGTGTTCGTCTTTTTGCTGACGGTGGCGGTCGAGTGGCTGTCGTGTTGGCGGGTGATGACGGAGGTAGGGCCGAGAAATGTGGCGGCCGGAATCGTGCAGACGGTGGTACATGGGATAAGAATGGGGATTGCATATTTGGTGATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGTGGCCGTCGCCGGACATATGGTTGGGTTTTTGGTTTTTGGAAGCAGAGTTGTGAAGAAGGAGAAATCATCGGCGTACGATCAGGGAACTGCCGATCTTCCATCCAGGATTTAA

Coding sequence (CDS)

ATGGAACAAAAAACAACAGCAATCTTAAGTCTTTGTTTTGTAATTTTTCTTTCTGTTTCTTCCAAATCCGACGCTACCAATGTTTTACTTCCCACCCACGACGGCATGCACATGGACCCCCCGCCGCCGCCGATAGCTCCGACGAGCAGAGGCTCCGGCGATGACATGCACACTCACGATATGATGTCATCGGCCATGCACATGACTTTCTTCTGGGGAAAAAACACACAAGTTTTGTTTTCCGGCTGGCCCGGGGACCGGTCCGGCATGTATGCAGTGGCGCTGGTGTTCGTCTTTTTGCTGACGGTGGCGGTCGAGTGGCTGTCGTGTTGGCGGGTGATGACGGAGGTAGGGCCGAGAAATGTGGCGGCCGGAATCGTGCAGACGGTGGTACATGGGATAAGAATGGGGATTGCATATTTGGTGATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGTGGCCGTCGCCGGACATATGGTTGGGTTTTTGGTTTTTGGAAGCAGAGTTGTGAAGAAGGAGAAATCATCGGCGTACGATCAGGGAACTGCCGATCTTCCATCCAGGATTTAA

Protein sequence

MEQKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTADLPSRI*

Homology

[Close]

BLAST of Chy12G208390 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-36
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 33  HDGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYA 92
           HD MH  PPP   +P+S    +    H MM   MHMTFFWGKNT+VLFSGWPG  SGMYA
Sbjct: 3   HDHMHDMPPP---SPSSSSMSNHTTPHMMM---MHMTFFWGKNTEVLFSGWPGTSSGMYA 62

Query: 93  VALVFVFLLTVAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGG 152
           + L+ +FLL V  EWL+   ++   G  N AAG+ QT V+ ++ G++YLVMLA+MSFN G
Sbjct: 63  LCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAG 122

Query: 153 VFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTADL 189
           VFIVA+AG+ VGF +FGS   KK      DQ TA+L
Sbjct: 123 VFIVAIAGYGVGFFLFGSTTFKKPSD---DQKTAEL 149

[Close]

BLAST of Chy12G208390 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-33
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 33  HDGMHMDPPP------PPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGD 92
           HD MH  P P       P +  + GS ++   H  M   MHMTFFWGKNT+VLFSGWPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 93  RSGMYAVALVFVFLLTVAVEWLSCWRVM--TEVGPRNVAAGIVQTVVHGIRMGIAYLVML 152
            SGMYA+ L+FVF L V  EWL+   ++  +     N AAG++QT V+ +R+G+AYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 153 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVK 175
           A+MSFN GVF+VA+AGH VGF++FGS+  +
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFR 152

[Close]

BLAST of Chy12G208390 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-31
Identity = 73/132 (55.30%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 43  PPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLT 102
           PP +P+S  +    HT+  M   MHMTFFWGKNT++LFSGWPG   GMY + L+ VFLL 
Sbjct: 7   PPSSPSSMVN----HTNSNM-IMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 66

Query: 103 VAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHM 162
           V VEWL+   ++   G  + A G+VQT V+ ++ G+AYLVMLA+MSFNGGVFIVA+AG  
Sbjct: 67  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 126

Query: 163 VGFLVFGSRVVK 175
           VGF++FGS   K
Sbjct: 127 VGFMLFGSTAFK 133

[Close]

BLAST of Chy12G208390 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.1e-27
Identity = 63/108 (58.33%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 67  HMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWL------SCWRVMTEVGPR 126
           HMTFFWGKN++VLF+ WPG R GMYA+AL+FVF L V VE+L      +C   +    P 
Sbjct: 34  HMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARRAP- 93

Query: 127 NVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVF 169
             A G+ +  VH +R+G+AYL+MLALMSFNGGVF+VAVAGH  GFL F
Sbjct: 94  -AAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAF 139

[Close]

BLAST of Chy12G208390 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.1e-27
Identity = 66/137 (48.18%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 34  DGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAV 93
           +GM M PPP P+                 +  MHMTFFWGKNT+VLF+ WPG R GMYA+
Sbjct: 6   NGMAMPPPPAPV---------------KKARYMHMTFFWGKNTEVLFTLWPGARGGMYAL 65

Query: 94  ALVFVFLLTVAVEWLSCWRVMTEVGPRNV--AAGIVQTVVHGIRMGIAYLVMLALMSFNG 153
           A++F+F L V +E+     +   +  R    AA  ++T VH +R+G+AYL+MLALMSFNG
Sbjct: 66  AILFMFALAVLLEFRGYRVLEARLARRRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNG 125

Query: 154 GVFIVAVAGHMVGFLVF 169
           GVF+  VAGH  GFL F
Sbjct: 126 GVFLAIVAGHAAGFLAF 127

[Close]

BLAST of Chy12G208390 vs. ExPASy TrEMBL
Match: A0A0A0LY50 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.9e-100
Identity = 186/192 (96.88%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MEQKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60
           MEQKTTAIL+LCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD
Sbjct: 1   MEQKTTAILTLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60

Query: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVGPR 120
           MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLL VAVEWLSCWR+MTEVGPR
Sbjct: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPR 120

Query: 121 NVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQT VHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180

Query: 181 YDQGTADLPSRI 193
           YDQGT DLPSR+
Sbjct: 181 YDQGTVDLPSRV 192

[Close]

BLAST of Chy12G208390 vs. ExPASy TrEMBL
Match: A0A1S3C5H1 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 177/192 (92.19%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 1   MEQKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60
           MEQKTT IL LCFVIFLSV SKS+ATNVL PTHDGMHMD PPPP++PTSRGSGDD+HTHD
Sbjct: 1   MEQKTT-ILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHD 60

Query: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVGPR 120
           MMS AMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLL VAVEWLSCWRVMTE GPR
Sbjct: 61  MMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPR 120

Query: 121 NVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQT VHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180

Query: 181 YDQGTADLPSRI 193
           YDQG+ADLPSR+
Sbjct: 181 YDQGSADLPSRV 191

[Close]

BLAST of Chy12G208390 vs. ExPASy TrEMBL
Match: A0A5D3BDI0 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001740 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 36  MHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 95
           MHMD PPPP++PTSRGSGDD+HTHDMMS AMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL
Sbjct: 1   MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 60

Query: 96  VFVFLLTVAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFI 155
           VFVFLL VAVEWLSCWRVMTE GPRNVAAGIVQT VHGIRMGIAYLVMLALMSFNGGVFI
Sbjct: 61  VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI 120

Query: 156 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGTADLPSRI 193
           VAVAGHMVGFLVFGSRVVKKEKSSAYDQG+ADLPSR+
Sbjct: 121 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRV 157

[Close]

BLAST of Chy12G208390 vs. ExPASy TrEMBL
Match: A0A6J1KI42 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.1e-71
Identity = 139/194 (71.65%), Postives = 159/194 (81.96%), Query Frame = 0


Query: 3   QKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHDMM 62
           + TT IL LC VI LSVSSK++A +V  P HDGMH DPPPPP+ P S GS DDMH+H M 
Sbjct: 2   KNTTKILILCLVISLSVSSKANAHDV-FPNHDGMHSDPPPPPMGPMSGGSDDDMHSHGMP 61

Query: 63  SSA----MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVG 122
           SS+    MHMTFFWGKNTQVLFSGWPG++SGMYA+AL+ VFLL V+VEWLS WR+MTE+G
Sbjct: 62  SSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMG 121

Query: 123 PRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKS 182
           PRN AAGIVQT VHG+R+GIAY+VMLALMSFNGGVFI A+AGH  GFL+FGSRV K  KS
Sbjct: 122 PRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTKS 181

Query: 183 SAYDQGTADLPSRI 193
             YD GTADLPS +
Sbjct: 182 KPYDPGTADLPSGV 194

[Close]

BLAST of Chy12G208390 vs. ExPASy TrEMBL
Match: A0A6J1G9S4 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 139/194 (71.65%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 3   QKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHDMM 62
           + TT IL LC VI LSVSSK+ A +V  P HDGMH DPPPPP+ P S GS DDMH+H M 
Sbjct: 2   KNTTKILILCLVISLSVSSKAKAHDV-FPNHDGMHSDPPPPPMGPMSGGSDDDMHSHGMP 61

Query: 63  SSA----MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVG 122
           SS+    MHMTFFWGKNTQVLFSGWPG++SGMYA+AL+ VFLL V+VEWLS WR+MTE+G
Sbjct: 62  SSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMG 121

Query: 123 PRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKS 182
           PRN AAGIVQT VHG+R+GIAYLVMLALMSFNGGVFI A+AGH  GFL+FGSRV+   KS
Sbjct: 122 PRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNTKS 181

Query: 183 SAYDQGTADLPSRI 193
             Y QGTADLPS +
Sbjct: 182 KPYQQGTADLPSGV 194

[Close]

BLAST of Chy12G208390 vs. NCBI nr
Match: XP_004145276.3 (LOW QUALITY PROTEIN: copper transporter 6 [Cucumis sativus])

HSP 1 Score: 362 bits (929), Expect = 9.43e-126
Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 1   MEQKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60
           MEQKTTAIL+LCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD
Sbjct: 1   MEQKTTAILTLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60

Query: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVGPR 120
           MMSSAMHMTFFWGKNTQVLFSGW     GMYAVALVFVFLL VAVEWLSCWR+MTEVGPR
Sbjct: 61  MMSSAMHMTFFWGKNTQVLFSGWLAGSVGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPR 120

Query: 121 NVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQT VHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180

Query: 181 YDQGTADLPSRI 192
           YDQGT DLPSR+
Sbjct: 181 YDQGTVDLPSRV 192

[Close]

BLAST of Chy12G208390 vs. NCBI nr
Match: XP_008457428.1 (PREDICTED: copper transporter 2-like [Cucumis melo])

HSP 1 Score: 353 bits (907), Expect = 2.06e-122
Identity = 177/192 (92.19%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 1   MEQKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60
           MEQKTT IL LCFVIFLSV SKS+ATNVL PTHDGMHMD PPPP++PTSRGSGDD+HTHD
Sbjct: 1   MEQKTT-ILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHD 60

Query: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVGPR 120
           MMS AMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLL VAVEWLSCWRVMTE GPR
Sbjct: 61  MMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPR 120

Query: 121 NVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQT VHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180

Query: 181 YDQGTADLPSRI 192
           YDQG+ADLPSR+
Sbjct: 181 YDQGSADLPSRV 191

[Close]

BLAST of Chy12G208390 vs. NCBI nr
Match: KAA0031769.1 (copper transporter 2-like [Cucumis melo var. makuwa] >TYJ97363.1 copper transporter 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 302 bits (774), Expect = 1.18e-102
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 36  MHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 95
           MHMD PPPP++PTSRGSGDD+HTHDMMS AMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL
Sbjct: 1   MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 60

Query: 96  VFVFLLTVAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFI 155
           VFVFLL VAVEWLSCWRVMTE GPRNVAAGIVQT VHGIRMGIAYLVMLALMSFNGGVFI
Sbjct: 61  VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI 120

Query: 156 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGTADLPSRI 192
           VAVAGHMVGFLVFGSRVVKKEKSSAYDQG+ADLPSR+
Sbjct: 121 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRV 157

[Close]

BLAST of Chy12G208390 vs. NCBI nr
Match: XP_038895621.1 (copper transporter 6-like [Benincasa hispida])

HSP 1 Score: 293 bits (749), Expect = 1.74e-98
Identity = 149/183 (81.42%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MEQKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60
           ME+ +T IL  CFVI LSVSSKS+ATNV  PTHDGMHMD PPPP+ PTS  SGDDMH+H+
Sbjct: 1   MEKTSTLIL--CFVICLSVSSKSNATNVF-PTHDGMHMDSPPPPMGPTSGDSGDDMHSHE 60

Query: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVGPR 120
           MMS+AMHM+FFWGKNTQVLFSGWPGDRSGMY +ALVFVFLL V VEWLS WRVMTE GPR
Sbjct: 61  MMSAAMHMSFFWGKNTQVLFSGWPGDRSGMYVIALVFVFLLAVVVEWLSYWRVMTEAGPR 120

Query: 121 NVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQT VHGIRMGIAY+VMLALMSFNGGVFIVA+AGH VGFLVFGSRV+K  KSS 
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYMVMLALMSFNGGVFIVAIAGHSVGFLVFGSRVLKTAKSSP 180

Query: 181 YDQ 183
            DQ
Sbjct: 181 DDQ 180

[Close]

BLAST of Chy12G208390 vs. NCBI nr
Match: XP_023525857.1 (copper transporter 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (719), Expect = 1.01e-93
Identity = 140/194 (72.16%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 3   QKTTAILSLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHDMM 62
           + TT IL LCFVI +SVSSK++A +V  P HDGMH DPPPPP+AP S GS DDMH+H M 
Sbjct: 2   KNTTKILILCFVISVSVSSKANAHDVF-PNHDGMHSDPPPPPMAPMSGGSDDDMHSHGMP 61

Query: 63  SSA----MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEVG 122
           SS+    MHMTFFWGKNTQVLFSGWPG++SGMYA+AL+ VFLL V+VEWLS WR+MTE+G
Sbjct: 62  SSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMG 121

Query: 123 PRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKS 182
           PRN AAGIVQT VHG+R+GIAY+VMLALMSFNGGVFI A+AGH  GFL+FGSRV+   KS
Sbjct: 122 PRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTKS 181

Query: 183 SAYDQGTADLPSRI 192
             YDQGTADLPS +
Sbjct: 182 KPYDQGTADLPSGV 194

[Close]

BLAST of Chy12G208390 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 33  HDGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYA 92
           HD MH  PPP   +P+S    +    H MM   MHMTFFWGKNT+VLFSGWPG  SGMYA
Sbjct: 3   HDHMHDMPPP---SPSSSSMSNHTTPHMMM---MHMTFFWGKNTEVLFSGWPGTSSGMYA 62

Query: 93  VALVFVFLLTVAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGG 152
           + L+ +FLL V  EWL+   ++   G  N AAG+ QT V+ ++ G++YLVMLA+MSFN G
Sbjct: 63  LCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAG 122

Query: 153 VFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTADL 189
           VFIVA+AG+ VGF +FGS   KK      DQ TA+L
Sbjct: 123 VFIVAIAGYGVGFFLFGSTTFKKPSD---DQKTAEL 149

[Close]

BLAST of Chy12G208390 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 144.8 bits (364), Expect = 7.1e-35
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 33  HDGMHMDPPP------PPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGD 92
           HD MH  P P       P +  + GS ++   H  M   MHMTFFWGKNT+VLFSGWPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 93  RSGMYAVALVFVFLLTVAVEWLSCWRVM--TEVGPRNVAAGIVQTVVHGIRMGIAYLVML 152
            SGMYA+ L+FVF L V  EWL+   ++  +     N AAG++QT V+ +R+G+AYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 153 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVK 175
           A+MSFN GVF+VA+AGH VGF++FGS+  +
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFR 152

[Close]

BLAST of Chy12G208390 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 137.9 bits (346), Expect = 8.7e-33
Identity = 73/132 (55.30%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 43  PPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLT 102
           PP +P+S  +    HT+  M   MHMTFFWGKNT++LFSGWPG   GMY + L+ VFLL 
Sbjct: 7   PPSSPSSMVN----HTNSNM-IMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 66

Query: 103 VAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHM 162
           V VEWL+   ++   G  + A G+VQT V+ ++ G+AYLVMLA+MSFNGGVFIVA+AG  
Sbjct: 67  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 126

Query: 163 VGFLVFGSRVVK 175
           VGF++FGS   K
Sbjct: 127 VGFMLFGSTAFK 133

[Close]

BLAST of Chy12G208390 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 34  DGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAV 93
           +GM    P  P AP+        H H  M   MHMTFFWGK T+VLF GWPG    MY V
Sbjct: 2   NGMSGSSPAAP-APSPSSFFQHRHRHGGM---MHMTFFWGKTTEVLFDGWPGTSLKMYWV 61

Query: 94  ALVFVFLLTVAVEWLSCWRVMTEVGPRNVAAGIVQTVVHGIRMGIAYLVMLALMSFNGGV 153
            L  +F+++   E LS    M + GP ++  G++QT V+ +R  ++YLVMLA+MSFNGGV
Sbjct: 62  CLAVIFVISAFSECLSRCGFM-KSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGV 121

Query: 154 FIVAVAGHMVGFLVFGSRVVKKEKSSAYDQ 184
           F+ A+AG  +GF++FGSR  +   S+++ +
Sbjct: 122 FVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Chy12G208390 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-23
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 64  SAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLTVAVEWLSCWRVMTEV--GPRN 123
           S +H TF+WG N QVLFSGWPG   GMYA+AL+FVF L    EWL+     + +  G   
Sbjct: 28  SLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADK 87

Query: 124 VAAGIVQTVVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVK 175
           +A    +T ++ ++ G +YLV+LA++SFNGGVF+ A+ GH +GF VF  R  +
Sbjct: 88  LAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFR 140

The following BLAST results are available for this feature:

BLAST of Chy12G208390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STG2	1.6e-36	53.85	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q39065	1.0e-33	52.00	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q8GWP3	1.2e-31	55.30	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q94EE4	4.1e-27	58.33	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]
Q60EN8	9.1e-27	48.18	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]

BLAST of Chy12G208390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY50	2.9e-100	96.88	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1	[more]
A0A1S3C5H1	1.2e-93	92.19	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1	[more]
A0A5D3BDI0	2.4e-78	93.63	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A6J1KI42	8.1e-71	71.65	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1	[more]
A0A6J1G9S4	2.4e-70	71.65	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1	[more]

BLAST of Chy12G208390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145276.3	9.43e-126	94.27	LOW QUALITY PROTEIN: copper transporter 6 [Cucumis sativus]	[more]
XP_008457428.1	2.06e-122	92.19	PREDICTED: copper transporter 2-like [Cucumis melo]	[more]
KAA0031769.1	1.18e-102	93.63	copper transporter 2-like [Cucumis melo var. makuwa] >TYJ97363.1 copper transpor...	[more]
XP_038895621.1	1.74e-98	81.42	copper transporter 6-like [Benincasa hispida]	[more]
XP_023525857.1	1.01e-93	72.16	copper transporter 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy12G208390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46900.1	1.2e-37	53.85	copper transporter 2	[more]
AT5G59030.1	7.1e-35	52.00	copper transporter 1	[more]
AT2G26975.1	8.7e-33	55.30	Ctr copper transporter family	[more]
AT5G59040.1	1.2e-26	44.00	copper transporter 3	[more]
AT2G37925.1	2.8e-23	46.90	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 123..168 e-value: 1.6E-7 score: 32.0 coord: 68..114 e-value: 7.9E-8 score: 33.0
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 52..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..54
None	No IPR available	PANTHER	PTHR12483:SF24	COPPER TRANSPORTER 1	coord: 52..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G208390.1	Chy12G208390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity