Chy12G208280 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G208280
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	C2H2-type domain-containing protein
Location	chrH12: 2634508 .. 2635540 (-)
RNA-Seq Expression	Chy12G208280
Synteny	Chy12G208280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGATCAACAAGAAGATGCAAGCTGTGAGTATCAAGAAGAACAAAGTGGTGTAAATCAATCAACAGTTAGGTCTTATGAGTGCAATTTTTGTAAAAGAGGCTTCACAAATGCACAAGCTCTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGATAACGACATCGTCGTTGTCGTCATCACCAAACAAGATGGTTGTAGACACTCCGAAGATGATGAGTACTCCAACAAGATTGCCATGGGTCGTCATCTCACCATCTACTAGAGAAGAGCATGGACGAAGCAGAGGTGGTCTAGAAGAAACCCTAATCTCGGAAGAGTTTCAACAACTCCCACTTTTCGTCGAAAATAATCCTTCAAATATGGATCAAAACTTGGAGATCCGTCAAGTTCTTCCGATCGATGTTGATTGTGATTCAAAGCTAGGATCGCCATCTCAACATGGTTCACCCGTCTCCGAGCTCGATCTTGAGCTTAGATTAGGACCCGAACCACAAAACTCCACTTCGTCATCATCACTCCCTACCGGTAGGACTACACATTTCTTTTGAATTATTTGATTGAAAGTTACACTACATATTGAGAACATTAATGAATTTAACTCATTCATCTTTAATTACCAAAAAACAAGTACATATTCTTTGGGTATTGTATATATTATTACATCATTTTAATCCTAAAAGAAACACTCCCAAACTTAATCAAAATTATAGTAATTTTATGTATTAGTATATATGATATATATGGATCCCTTTACAGCAACAAGGCCCCAAAATATAGTGTATGTGTGTTTTTATTTGATGTTTTGTCAATGGAAACTTATTCTTGTAAAAATAATACATACAATATATATTTACTGTATATATATTTTGGTTCATAAATATCATTAAATGTAAAAGAAAAAGGATATTTTGGTATCAATCTATAAACTTATTAAACAAATTAAGGGTTTAATTTGATTTAATTTGTTTGGTTATAGACTTGTGGCAAAGGGAAATGGGAAAATGA

mRNA sequence

ATGGAAATTGATCAACAAGAAGATGCAAGCTGTGAGTATCAAGAAGAACAAAGTGGTGTAAATCAATCAACAGTTAGGTCTTATGAGTGCAATTTTTGTAAAAGAGGCTTCACAAATGCACAAGCTCTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGATAACGACATCGTCGTTGTCGTCATCACCAAACAAGATGGTTGTAGACACTCCGAAGATGATGAGTACTCCAACAAGATTGCCATGGGTCGTCATCTCACCATCTACTAGAGAAGAGCATGGACGAAGCAGAGGTGGTCTAGAAGAAACCCTAATCTCGGAAGAGTTTCAACAACTCCCACTTTTCGTCGAAAATAATCCTTCAAATATGGATCAAAACTTGGAGATCCGTCAAGTTCTTCCGATCGATGTTGATTGTGATTCAAAGCTAGGATCGCCATCTCAACATGGTTCACCCGTCTCCGAGCTCGATCTTGAGCTTAGATTAGGACCCGAACCACAAAACTCCACTTCGTCATCATCACTCCCTACCGACTTGTGGCAAAGGGAAATGGGAAAATGA

Coding sequence (CDS)

ATGGAAATTGATCAACAAGAAGATGCAAGCTGTGAGTATCAAGAAGAACAAAGTGGTGTAAATCAATCAACAGTTAGGTCTTATGAGTGCAATTTTTGTAAAAGAGGCTTCACAAATGCACAAGCTCTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGATAACGACATCGTCGTTGTCGTCATCACCAAACAAGATGGTTGTAGACACTCCGAAGATGATGAGTACTCCAACAAGATTGCCATGGGTCGTCATCTCACCATCTACTAGAGAAGAGCATGGACGAAGCAGAGGTGGTCTAGAAGAAACCCTAATCTCGGAAGAGTTTCAACAACTCCCACTTTTCGTCGAAAATAATCCTTCAAATATGGATCAAAACTTGGAGATCCGTCAAGTTCTTCCGATCGATGTTGATTGTGATTCAAAGCTAGGATCGCCATCTCAACATGGTTCACCCGTCTCCGAGCTCGATCTTGAGCTTAGATTAGGACCCGAACCACAAAACTCCACTTCGTCATCATCACTCCCTACCGACTTGTGGCAAAGGGAAATGGGAAAATGA

Protein sequence

MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQLPLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSSSSLPTDLWQREMGK*

Homology

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BLAST of Chy12G208280 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10
Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 13  YQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNK 72
           +Q     +NQS  RSY C+FC RGF+NAQALGGHMNIHR+++AKL+Q +    +  + + 
Sbjct: 22  HQGVDDSLNQS--RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKL----MEDNKDD 81

Query: 73  MVVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGL----EETLISEEF---QQLPLFVEN 132
           +V ++             V+S    E+  +    L     +  +  +    Q+L  +V+ 
Sbjct: 82  VVAESDAS---------EVVSLDLNEQQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQE 141

Query: 133 NPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLG 171
             S +D N +  +V    +D     GS S H   +  LDLELRLG
Sbjct: 142 --SKLDTN-DHGKVTEASID-----GSSSSHHRDIEVLDLELRLG 163

[Close]

BLAST of Chy12G208280 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 26  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK--QSITTSSLSSSP-------NKMVVD 85
           RSY C+FCKR F +AQALGGHMN+HR+++A+L+  QS ++SS  S P          + +
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMAN 104

Query: 86  TPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISE---------EFQQLPLFVENNP 145
           +P    +P  L   +  PS+     R R GL  +L  +         + ++  L VE   
Sbjct: 105 SPPPHHSPLTLFPTLSPPSS----PRYRAGLIRSLSPKSKHTPENACKTKKSSLLVEAGE 164

Query: 146 SNMDQNLEIRQVLPID--VDCDSKLGSPSQHGSPVSELDLELRLG 171
           +    + +  ++L  D  +  + ++G  ++      +LDLELRLG
Sbjct: 165 ATRFTSKDACKILRNDEIISLELEIGLINE---SEQDLDLELRLG 202

[Close]

BLAST of Chy12G208280 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 23/35 (65.71%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 26 RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 61
          RSY C+FC+R F +AQALGGHMN+HR+++A+LKQ+
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71

[Close]

BLAST of Chy12G208280 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-07
Identity = 23/47 (48.94%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 13 YQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQ 60
          Y+  ++G+     ++Y C+FC+R F +AQALGGHMN+HR+++AKL+Q
Sbjct: 34 YKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQ 80

[Close]

BLAST of Chy12G208280 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 4.7e-07
Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 26  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK-QSITTSSLSSSPNKMVVDTPKMMSTP 85
           RSY C+FC R F +AQALGGHMN+HR+++A+LK QS++ SS   +         +++   
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPPECDRQQQVLDVG 112

Query: 86  TRLPWVVISPSTREEHGRSR 105
           ++   V++   TR+ +G  R
Sbjct: 113 SK---VLVQEETRKPNGTKR 129

[Close]

BLAST of Chy12G208280 vs. ExPASy TrEMBL
Match: A0A0A0LXG2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524710 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.8e-94
Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQLP 120
           ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTR+EHGRS+GGLEETLISEEFQQLP
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTRKEHGRSKGGLEETLISEEFQQLP 120

Query: 121 LFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSSS 180
           LFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPS+HGS VSELDLELRLGPEPQNSTSSS
Sbjct: 121 LFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTSSS 180

Query: 181 SLPT 185
           SLPT
Sbjct: 181 SLPT 184

[Close]

BLAST of Chy12G208280 vs. ExPASy TrEMBL
Match: A0A5A7VKP9 (Transcriptional regulator TAC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001930 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.3e-88
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQ EQSGVNQST RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQ-EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRS-RGGLEETLISEEFQQL 120
           ITTSSLSSSPNKMVVDTPKMMSTPTR PWVVISPSTREEHGRS R GLEETLISEEFQQL
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQL 120

Query: 121 PLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSS 180
           PLFVENNPSN+DQNLEIRQVLPI+VDCDSKLGSPS+HGS VSELDLELRLGPEPQNST S
Sbjct: 121 PLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPS 180

Query: 181 SSLPT 185
           +SLPT
Sbjct: 181 TSLPT 184

[Close]

BLAST of Chy12G208280 vs. ExPASy TrEMBL
Match: A0A1S3C679 (transcriptional regulator TAC1-like OS=Cucumis melo OX=3656 GN=LOC103497134 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.3e-88
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQ EQSGVNQST RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQ-EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRS-RGGLEETLISEEFQQL 120
           ITTSSLSSSPNKMVVDTPKMMSTPTR PWVVISPSTREEHGRS R GLEETLISEEFQQL
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQL 120

Query: 121 PLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSS 180
           PLFVENNPSN+DQNLEIRQVLPI+VDCDSKLGSPS+HGS VSELDLELRLGPEPQNST S
Sbjct: 121 PLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPS 180

Query: 181 SSLPT 185
           +SLPT
Sbjct: 181 TSLPT 184

[Close]

BLAST of Chy12G208280 vs. ExPASy TrEMBL
Match: A0A6J1CKV7 (transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC111012082 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.2e-43
Identity = 114/195 (58.46%), Postives = 135/195 (69.23%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQ-EEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQ 60
           MEID +  A CE Q E+Q  + +  +RSYEC FCKRGFTNAQALGGHMNIHRK+KAK+KQ
Sbjct: 1   MEID-EAGAGCEIQDEDQVMIQEEHIRSYECTFCKRGFTNAQALGGHMNIHRKDKAKMKQ 60

Query: 61  SITTSSLSSSPNKMVV-DTPKMMSTPTRLPWVVISPSTREEHGRSRG------------G 120
           S ++SSLS S NKM V D  K++STP RLPWV+  PST  E GR RG             
Sbjct: 61  SASSSSLSMSSNKMPVDDISKIISTPARLPWVI--PSTTTE-GRGRGEDRGEIGEITSST 120

Query: 121 LEETLISEEFQQLPLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLE 180
           +EETL   + QQL LF ++  SNMDQ   + QVLP++   D K+  P QHGS VSELDLE
Sbjct: 121 MEETL-KGKVQQLQLFEKS--SNMDQKFRVHQVLPLEASSDQKMVPPFQHGSTVSELDLE 180

Query: 181 LRLGPEPQNSTSSSS 182
           LRLGPEPQNST SS+
Sbjct: 181 LRLGPEPQNSTPSST 188

[Close]

BLAST of Chy12G208280 vs. ExPASy TrEMBL
Match: A0A498KFS7 (C2H2-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_038597 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 5.9e-21
Identity = 72/184 (39.13%), Postives = 100/184 (54.35%), Query Frame = 0


Query: 15  EEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSS------ 74
           ++Q G ++   +SYECNFCKRGFTNAQALGGHMNIHRK+KAKLKQ  +++++ +      
Sbjct: 20  QQQQGASKQAAKSYECNFCKRGFTNAQALGGHMNIHRKDKAKLKQVSSSNTIETKHHHQQ 79

Query: 75  SPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQLPLFVENNPS 134
              + V+D PKM S  + +   + S    +  GR    ++   I   +   P  +  N  
Sbjct: 80  QQKQNVLDFPKMPSLDSPILPTINSLQHNKPIGRD---IDRNTIRAPW---PWLISENSD 139

Query: 135 NMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPV--------SELDLELRLGPEPQNSTSSS 185
              Q L +    P         G+P  HG  +        SELDLELRLGPEPQNS+SS+
Sbjct: 140 TTMQQLALFSQTPSHNKDHQNPGTPQVHGDQLENSLQLSGSELDLELRLGPEPQNSSSST 197

[Close]

BLAST of Chy12G208280 vs. NCBI nr
Match: XP_004145329.1 (transcriptional regulator TAC1 [Cucumis sativus] >KGN65749.1 hypothetical protein Csa_019602 [Cucumis sativus])

HSP 1 Score: 355 bits (910), Expect = 7.22e-123
Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQLP 120
           ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTR+EHGRS+GGLEETLISEEFQQLP
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTRKEHGRSKGGLEETLISEEFQQLP 120

Query: 121 LFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSSS 180
           LFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPS+HGS VSELDLELRLGPEPQNSTSSS
Sbjct: 121 LFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTSSS 180

Query: 181 SLPT 184
           SLPT
Sbjct: 181 SLPT 184

[Close]

BLAST of Chy12G208280 vs. NCBI nr
Match: XP_008457447.1 (PREDICTED: transcriptional regulator TAC1-like [Cucumis melo] >KAA0067767.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa] >TYJ97379.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 334 bits (856), Expect = 1.23e-114
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQE QSGVNQST RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQE-QSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTREEHGRS-RGGLEETLISEEFQQL 120
           ITTSSLSSSPNKMVVDTPKMMSTPTR PWVVISPSTREEHGRS R GLEETLISEEFQQL
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQL 120

Query: 121 PLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSS 180
           PLFVENNPSN+DQNLEIRQVLPI+VDCDSKLGSPS+HGS VSELDLELRLGPEPQNST S
Sbjct: 121 PLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPS 180

Query: 181 SSLPT 184
           +SLPT
Sbjct: 181 TSLPT 184

[Close]

BLAST of Chy12G208280 vs. NCBI nr
Match: XP_038895788.1 (transcriptional regulator TAC1-like [Benincasa hispida])

HSP 1 Score: 259 bits (663), Expect = 2.85e-85
Identity = 144/182 (79.12%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQ DASCEYQEEQSGVN+S  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQ-DASCEYQEEQSGVNKSAARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMM--STPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQ 120
           I++ SLSSS NKMVVD PKM+  +TP +LPWVV SPS  E H RS GG EETLISEE QQ
Sbjct: 61  ISSPSLSSSSNKMVVDIPKMIPRTTPPQLPWVV-SPSMSEGHRRSGGGREETLISEEVQQ 120

Query: 121 LPLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTS 180
           LPLFV+N  SNMDQNL+I QVLPI+V  D KLGS  +HGS +SELDLELRLGPEPQNST 
Sbjct: 121 LPLFVKNT-SNMDQNLKIHQVLPIEVASDPKLGSSFRHGSSISELDLELRLGPEPQNSTP 179

[Close]

BLAST of Chy12G208280 vs. NCBI nr
Match: XP_022141797.1 (transcriptional regulator TAC1-like [Momordica charantia])

HSP 1 Score: 184 bits (468), Expect = 1.56e-55
Identity = 114/195 (58.46%), Postives = 135/195 (69.23%), Query Frame = 0


Query: 1   MEIDQQEDASCEYQEE-QSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQ 60
           MEID+   A CE Q+E Q  + +  +RSYEC FCKRGFTNAQALGGHMNIHRK+KAK+KQ
Sbjct: 1   MEIDEA-GAGCEIQDEDQVMIQEEHIRSYECTFCKRGFTNAQALGGHMNIHRKDKAKMKQ 60

Query: 61  SITTSSLSSSPNKMVVDT-PKMMSTPTRLPWVVISPSTREEHGRSRGG------------ 120
           S ++SSLS S NKM VD   K++STP RLPWV+  PST  E GR RG             
Sbjct: 61  SASSSSLSMSSNKMPVDDISKIISTPARLPWVI--PSTTTE-GRGRGEDRGEIGEITSST 120

Query: 121 LEETLISEEFQQLPLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLE 180
           +EETL  +  QQL LF ++  SNMDQ   + QVLP++   D K+  P QHGS VSELDLE
Sbjct: 121 MEETLKGK-VQQLQLFEKS--SNMDQKFRVHQVLPLEASSDQKMVPPFQHGSTVSELDLE 180

[Close]

BLAST of Chy12G208280 vs. NCBI nr
Match: RXI04323.1 (hypothetical protein DVH24_038597 [Malus domestica])

HSP 1 Score: 111 bits (277), Expect = 1.04e-26
Identity = 72/184 (39.13%), Postives = 100/184 (54.35%), Query Frame = 0


Query: 15  EEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM- 74
           ++Q G ++   +SYECNFCKRGFTNAQALGGHMNIHRK+KAKLKQ  +++++ +  +   
Sbjct: 20  QQQQGASKQAAKSYECNFCKRGFTNAQALGGHMNIHRKDKAKLKQVSSSNTIETKHHHQQ 79

Query: 75  -----VVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQLPLFVENNPS 134
                V+D PKM S  + +   + S    +  GR    ++   I   +   P  +  N  
Sbjct: 80  QQKQNVLDFPKMPSLDSPILPTINSLQHNKPIGRD---IDRNTIRAPW---PWLISENSD 139

Query: 135 NMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPV--------SELDLELRLGPEPQNSTSSS 184
              Q L +    P         G+P  HG  +        SELDLELRLGPEPQNS+SS+
Sbjct: 140 TTMQQLALFSQTPSHNKDHQNPGTPQVHGDQLENSLQLSGSELDLELRLGPEPQNSSSST 197

[Close]

BLAST of Chy12G208280 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 13  YQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNK 72
           +Q     +NQS  RSY C+FC RGF+NAQALGGHMNIHR+++AKL+Q +    +  + + 
Sbjct: 22  HQGVDDSLNQS--RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKL----MEDNKDD 81

Query: 73  MVVDTPKMMSTPTRLPWVVISPSTREEHGRSRGGL----EETLISEEF---QQLPLFVEN 132
           +V ++             V+S    E+  +    L     +  +  +    Q+L  +V+ 
Sbjct: 82  VVAESDAS---------EVVSLDLNEQQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQE 141

Query: 133 NPSNMDQNLEIRQVLPIDVDCDSKLGSPSQHGSPVSELDLELRLG 171
             S +D N +  +V    +D     GS S H   +  LDLELRLG
Sbjct: 142 --SKLDTN-DHGKVTEASID-----GSSSSHHRDIEVLDLELRLG 163

[Close]

BLAST of Chy12G208280 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 50/160 (31.25%), Postives = 75/160 (46.88%), Query Frame = 0


Query: 23  STVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKMVVDTPKMMS 82
           S  R Y C FC+RGF+NAQALGGHMNIHRK++AKL+Q+          N    D+   + 
Sbjct: 16  SQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQA----------NLKEEDSEDAIC 75

Query: 83  TPTRLPWVVISPSTREEHGRSRGGLEETLISEEFQQLPLFVEN-NPSNMDQNLEIRQVLP 142
           T +R                           +E  +LP FV+   P    ++ +  + L 
Sbjct: 76  TTSR-----------------------NRFGQELIELPFFVDTVGPRRKGEDDKSEKGLG 135

Query: 143 IDVDCDSKLGSPSQHGSPVSELDLELRLGPEPQNSTSSSS 182
            +   + ++   +   S    +DLELRLG +P   T+S+S
Sbjct: 136 DEEKKNMRILQKALSQS-ADVIDLELRLGLDPYKKTTSTS 141

[Close]

BLAST of Chy12G208280 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 18 SGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEK 55
          S V+  T R YEC FCKRGFTNAQALGGHMNIHR+++
Sbjct: 25 SSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDR 61

[Close]

BLAST of Chy12G208280 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 26  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK--QSITTSSLSSSP-------NKMVVD 85
           RSY C+FCKR F +AQALGGHMN+HR+++A+L+  QS ++SS  S P          + +
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMAN 104

Query: 86  TPKMMSTPTRLPWVVISPSTREEHGRSRGGLEETLISE---------EFQQLPLFVENNP 145
           +P    +P  L   +  PS+     R R GL  +L  +         + ++  L VE   
Sbjct: 105 SPPPHHSPLTLFPTLSPPSS----PRYRAGLIRSLSPKSKHTPENACKTKKSSLLVEAGE 164

Query: 146 SNMDQNLEIRQVLPID--VDCDSKLGSPSQHGSPVSELDLELRLG 171
           +    + +  ++L  D  +  + ++G  ++      +LDLELRLG
Sbjct: 165 ATRFTSKDACKILRNDEIISLELEIGLINE---SEQDLDLELRLG 202

[Close]

BLAST of Chy12G208280 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 58.2 bits (139), Expect = 8.8e-09
Identity = 23/35 (65.71%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 26 RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 61
          RSY C+FC+R F +AQALGGHMN+HR+++A+LKQ+
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71

The following BLAST results are available for this feature:

BLAST of Chy12G208280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR34	2.7e-10	33.33	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]
Q38895	7.2e-08	31.52	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	1.2e-07	65.71	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SLB8	3.6e-07	48.94	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9LHS9	4.7e-07	38.75	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Chy12G208280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG2	1.8e-94	97.83	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524710 P...	[more]
A0A5A7VKP9	3.3e-88	94.05	Transcriptional regulator TAC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C679	3.3e-88	94.05	transcriptional regulator TAC1-like OS=Cucumis melo OX=3656 GN=LOC103497134 PE=4...	[more]
A0A6J1CKV7	4.2e-43	58.46	transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC1110120...	[more]
A0A498KFS7	5.9e-21	39.13	C2H2-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_038597 P...	[more]

BLAST of Chy12G208280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145329.1	7.22e-123	97.83	transcriptional regulator TAC1 [Cucumis sativus] >KGN65749.1 hypothetical protei...	[more]
XP_008457447.1	1.23e-114	94.05	PREDICTED: transcriptional regulator TAC1-like [Cucumis melo] >KAA0067767.1 tran...	[more]
XP_038895788.1	2.85e-85	79.12	transcriptional regulator TAC1-like [Benincasa hispida]	[more]
XP_022141797.1	1.56e-55	58.46	transcriptional regulator TAC1-like [Momordica charantia]	[more]
RXI04323.1	1.04e-26	39.13	hypothetical protein DVH24_038597 [Malus domestica]	[more]

BLAST of Chy12G208280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09290.1	1.9e-11	33.33	telomerase activator1	[more]
AT3G53820.1	1.6e-10	31.25	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G43540.1	4.7e-10	72.97	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	5.1e-09	31.52	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	8.8e-09	65.71	zinc-finger protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 28..53 e-value: 1.6E-5 score: 24.8
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 5..82 e-value: 1.1E-8 score: 36.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..78
None	No IPR available	PANTHER	PTHR45801:SF58	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 3..178
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 3..178
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 30..50
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 28..55 score: 12.029573
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 26..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G208280.1	Chy12G208280.1	mRNA