Chy12G206890 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G206890
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH12: 889782 .. 890015 (+)
RNA-Seq Expression	Chy12G206890
Synteny	Chy12G206890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCAAACCAGGAAAAATTTGGAAAAATGGCTCTAAAGAAGTTTAAAGAAAGGCTTGATGCAACAGATCAGGAAATTACTGCAATTGCTCAGAAGATACTGAAATTAAAAGAAAATTTGCCATCATTGGTCAAATGTGTTGATCGGTTGAGTCTTCAAACAGATAAGCAACAACAATCTTTTGATGAAACTCTGCAACTTTTGGCTACATTAACTTCTGGTTTTGTTCATCGCG

mRNA sequence

AGCCAAACCAGGAAAAATTTGGAAAAATGGCTCTAAAGAAGTTTAAAGAAAGGCTTGATGCAACAGATCAGGAAATTACTGCAATTGCTCAGAAGATACTGAAATTAAAAGAAAATTTGCCATCATTGGTCAAATGTGTTGATCGGTTGAGTCTTCAAACAGATAAGCAACAACAATCTTTTGATGAAACTCTGCAACTTTTGGCTACATTAACTTCTGGTTTTGTTCATCGCG

Coding sequence (CDS)

AGCCAAACCAGGAAAAATTTGGAAAAATGGCTCTAAAGAAGTTTAAAGAAAGGCTTGATGCAACAGATCAGGAAATTACTGCAATTGCTCAGAAGATACTGAAATTAAAAGAAAATTTGCCATCATTGGTCAAATGTGTTGATCGGTTGAGTCTTCAAACAGATAAGCAACAACAATCTTTTGATGAAACTCTGCAACTTTTGGCTACATTAACTTCTGGTTTTGTTCATCGCG

Protein sequence

SQTRKNLEKWL*RSLKKGLMQQIRKLLQLLRRY*N*KKICHHWSNVLIG*VFKQISNNNLLMKLCNFWLH*LLVLFIA

Homology

The following BLAST results are available for this feature:

BLAST of Chy12G206890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G206890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G206890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G206890 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 15..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G206890.1	Chy12G206890.1	mRNA