Chy11G205460 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G205460
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	50S ribosomal protein L3
Location	chrH11: 25653038 .. 25654924 (-)
RNA-Seq Expression	Chy11G205460
Synteny	Chy11G205460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATCATTTCATTTTCATCAGCTTCTGCCTCAACCAAACATCCAATTTTCACTAACAATCCTTCTTCTTCTTCTTTTTCATCTCTCACACTCAGAACTTCTTTCCTCGCCCTTCCTCTCAAATCCCACCACAAAAGCAACCTTCGTTTCCATTTTCCAACACGGCCAACCACCAGACGTCCTAGCGATGGCCTCTCCGTTTGTATGAGCATGGAGGCTGGCATTGGCGTTATGGCCACTAAGCTCGGTATGATGAGCTTCTTTGAACCGGATGGCAAGGTCATCCCTGTCACCGTGGTCGGCTTCAAGGAAGGCAACATCGTCACCCAGGTTAAGACGGACGCGACTGACGGCTACAGTGCCGTTCAGGTTGGCTACCGTAGGGTTAGGGATCGAAAATTGACGAAACCGGAATTGGGGCATCTTGAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGCCTTGAGTCTGTGGATGGATTTGAGCCCAATCAGCGCCTCGTTTTCAATGAACTTTTCAAGGAGGGGGACCTGGTTGATGTTTCGGGCACTACAATTGGAAAGGGGTTTCAAGGTTTTTGAGTTTCTTGCCTTTTCTGTTTGAAATCTGTGTTTATTTCATAGCTACGAAATTGCCTCGCCTCCCTGTTTTCCTTGGAGCTTATGGTTTTTGTTCTGTGCCTGCTTAATGTTGGAGTTGAGTCTAGGCATTTTTTTCCCTGTGCCTGCATAATGTTGGAGTTGAATTTAGGCTTCCTCAGGAAGGATTAAACATGGATTTTCATTGATGTTGTTTGAATGCACAATGGCATATGCTATTCAAAGCCTGAACCAGTCTTCCATGAAAGAAGCTGTTTAGATTTCCATTCCCCAAGTATTGAATGTGAGGATATGATAGTTTTATTTGTGCAAATATTTGCTAATTTTGTGTGGGTATAAGGATGTGCCCGTGCTACCTTCGTTGACAAGCTTTCATTCCAACACACATTCTTTGTCATCCCTTGTCATGCTCGACTCCATGAGATTGTGCTTACATCTTATGCTCTATTAAATCACTATTAGACATGAGAGCTTAAGTTGAAACTTTATGGTAGGTTTTTATCATTAAATATGTACTCAAACCCCTCATGTGCAAACTTATATACCTATTTGATTTACAAGACCCAACGTTATTATAAAGTTAGAAGAAAACAGACCATAGAAAGTTTGTTTCACCAACACTCTTATTCTTTCCAAAATTGCAATATAACCTTCCATCTTTCGTAAGTGTTTCAAAAATACTCATGCAATAGAAATCCTTTAGAATTTTGGATAAAATTGTACCTGGAACAATGTGGCAGTGACCTAATGGTGTAACAGATCTACATTTCCGTTGCAGGTTTCAATTTTTATTTGCAGTTCATTTCTACTTCTAGGGTAGTTTTGAAACGTTTACAGAAAGTCAAGAGTATTATTGCAACTTTTTATTTTTTAAACAAACAGCAAAGTTTAGGATATTCTTTATAACTTTATGTGTTCTCCACCTCCTTTCAACTCTACTCTCTAACTGGTTTCTTGTATCATTCTCTCTATAATTCTTCTCTAGGTGGAATCAAGAGGCACAACTTCAAAAGAGGTCCAATGAGCCACGGTTCAAAGAGCCACAGGGCACTTGGATCAATCGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGAAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTCAAGATTGTAAAGATCGATGAAGACCTTAATGTTGTGATGATCAAAGGAGCCGTCCCAGGTAAACCAGGAAACCTTCTTCGTCTAGCTCCTGCAAAGATAGTAGGACAGAACATTCCTAAGAACTAG

mRNA sequence

ATGTCTATCATTTCATTTTCATCAGCTTCTGCCTCAACCAAACATCCAATTTTCACTAACAATCCTTCTTCTTCTTCTTTTTCATCTCTCACACTCAGAACTTCTTTCCTCGCCCTTCCTCTCAAATCCCACCACAAAAGCAACCTTCGTTTCCATTTTCCAACACGGCCAACCACCAGACGTCCTAGCGATGGCCTCTCCGTTTGTATGAGCATGGAGGCTGGCATTGGCGTTATGGCCACTAAGCTCGGTATGATGAGCTTCTTTGAACCGGATGGCAAGGTCATCCCTGTCACCGTGGTCGGCTTCAAGGAAGGCAACATCGTCACCCAGGTTAAGACGGACGCGACTGACGGCTACAGTGCCGTTCAGGTTGGCTACCGTAGGGTTAGGGATCGAAAATTGACGAAACCGGAATTGGGGCATCTTGAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGCCTTGAGTCTGTGGATGGATTTGAGCCCAATCAGCGCCTCGTTTTCAATGAACTTTTCAAGGAGGGGGACCTGGTTGATGTTTCGGGCACTACAATTGGAAAGGGGTTTCAAGGTGGAATCAAGAGGCACAACTTCAAAAGAGGTCCAATGAGCCACGGTTCAAAGAGCCACAGGGCACTTGGATCAATCGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGAAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTCAAGATTGTAAAGATCGATGAAGACCTTAATGTTGTGATGATCAAAGGAGCCGTCCCAGGTAAACCAGGAAACCTTCTTCGTCTAGCTCCTGCAAAGATAGTAGGACAGAACATTCCTAAGAACTAG

Coding sequence (CDS)

ATGTCTATCATTTCATTTTCATCAGCTTCTGCCTCAACCAAACATCCAATTTTCACTAACAATCCTTCTTCTTCTTCTTTTTCATCTCTCACACTCAGAACTTCTTTCCTCGCCCTTCCTCTCAAATCCCACCACAAAAGCAACCTTCGTTTCCATTTTCCAACACGGCCAACCACCAGACGTCCTAGCGATGGCCTCTCCGTTTGTATGAGCATGGAGGCTGGCATTGGCGTTATGGCCACTAAGCTCGGTATGATGAGCTTCTTTGAACCGGATGGCAAGGTCATCCCTGTCACCGTGGTCGGCTTCAAGGAAGGCAACATCGTCACCCAGGTTAAGACGGACGCGACTGACGGCTACAGTGCCGTTCAGGTTGGCTACCGTAGGGTTAGGGATCGAAAATTGACGAAACCGGAATTGGGGCATCTTGAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGCCTTGAGTCTGTGGATGGATTTGAGCCCAATCAGCGCCTCGTTTTCAATGAACTTTTCAAGGAGGGGGACCTGGTTGATGTTTCGGGCACTACAATTGGAAAGGGGTTTCAAGGTGGAATCAAGAGGCACAACTTCAAAAGAGGTCCAATGAGCCACGGTTCAAAGAGCCACAGGGCACTTGGATCAATCGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGAAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTCAAGATTGTAAAGATCGATGAAGACCTTAATGTTGTGATGATCAAAGGAGCCGTCCCAGGTAAACCAGGAAACCTTCTTCGTCTAGCTCCTGCAAAGATAGTAGGACAGAACATTCCTAAGAACTAG

Protein sequence

MSIISFSSASASTKHPIFTNNPSSSSFSSLTLRTSFLALPLKSHHKSNLRFHFPTRPTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN*

Homology

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BLAST of Chy11G205460 vs. ExPASy Swiss-Prot
Match: O80360 (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPL3 PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.4e-110
Identity = 204/263 (77.57%), Postives = 232/263 (88.21%), Query Frame = 0


Query: 30  LTLRTSFL-ALPLKSHHKSNLRFHFPTRPTTRRPSDGLSVCMSMEAGIGVMATKLGMMSF 89
           LTLR+ FL  LPL++     L+ H   +PT+   S   S+  S+EAG+GVMATKLGMMSF
Sbjct: 6   LTLRSPFLHRLPLRA-----LKTH---KPTSLHISKS-SISASLEAGVGVMATKLGMMSF 65

Query: 90  FEPDGKVIPVTVVGFKEGNIVTQVKTDATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGA 149
           FE  G V+PVTVVGF+EGNIVTQ+KT+ATDGY+AVQVGYRRVRDRKLTKPE+GHLEK+G 
Sbjct: 66  FEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGI 125

Query: 150 IPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM 209
           IP+RHLQEFRL+S+DGFE  Q+L F ELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRG M
Sbjct: 126 IPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQM 185

Query: 210 SHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAV 269
           +HGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKID+ LN++MIKGA+
Sbjct: 186 THGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGAL 245

Query: 270 PGKPGNLLRLAPAKIVGQNIPKN 292
           PGKPGNLLR+APAKIVG+NIPK+
Sbjct: 246 PGKPGNLLRIAPAKIVGKNIPKS 259

[Close]

BLAST of Chy11G205460 vs. ExPASy Swiss-Prot
Match: Q9SKX4 (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3A PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-107
Identity = 189/230 (82.17%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 62  PSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDGYS 121
           P     V  SMEAGIGVM +KLGMMSFFE DG V+PVTVVGF+EGNIVTQ+KT ATDGY 
Sbjct: 42  PKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYD 101

Query: 122 AVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGD 181
           AVQ+GYRRVRD+KLTKPE GHL+KAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGD
Sbjct: 102 AVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGD 161

Query: 182 LVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 241
           LVDV+GTTIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG
Sbjct: 162 LVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 221

Query: 242 GTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           GT+ KIRKLKIVK+D++LNVVMIKGA+PGKPGNLLR+ PAKIVG NIPKN
Sbjct: 222 GTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

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BLAST of Chy11G205460 vs. ExPASy Swiss-Prot
Match: P82191 (50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 6.0e-107
Identity = 211/296 (71.28%), Postives = 236/296 (79.73%), Query Frame = 0


Query: 2   SIISFSSASASTKHPIFTNNPSS----SSFSSLTLRTSFLALPLKSHHKSNLRFHFPTRP 61
           S  ++SS+  S   P   +  SS        SL L TSF+  P   +    L+   P+R 
Sbjct: 13  SSCTYSSSKRSLSSPKAVSLSSSVNGTPKVQSLRLSTSFVCSP---NQIIKLKSVSPSRS 72

Query: 62  T-TRRPSDGLSV-CMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTD 121
           T  RR   GL +  MS++AGIGVM TKLGMMSFFE DG V+PVTV+GFKEGNIVTQVKT+
Sbjct: 73  TQLRRAVGGLEIKMMSVDAGIGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIVTQVKTE 132

Query: 122 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 181
           +TDGY+AVQVGY R+RDRKLT PE GHL KAG IPMRHLQEFRL SVD F P+Q+L+F E
Sbjct: 133 STDGYNAVQVGYERLRDRKLTMPERGHLNKAGVIPMRHLQEFRLVSVDDFTPSQKLLFEE 192

Query: 182 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKK 241
           LFKEGD+VD+SGTTIGKGFQGGIKRHNFKRG M+HGSKSHRALGSIGAGTTPG VYKGKK
Sbjct: 193 LFKEGDMVDISGTTIGKGFQGGIKRHNFKRGLMTHGSKSHRALGSIGAGTTPGHVYKGKK 252

Query: 242 MPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           MPGRMGGTK KIRKLKI+KID DL VVMIKGAVPGKPGNLLRLAPAKIVG+NIPKN
Sbjct: 253 MPGRMGGTKTKIRKLKIMKIDTDLRVVMIKGAVPGKPGNLLRLAPAKIVGKNIPKN 305

[Close]

BLAST of Chy11G205460 vs. ExPASy Swiss-Prot
Match: B1XJT9 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rplC PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.4e-65
Identity = 125/213 (58.69%), Postives = 165/213 (77.46%), Query Frame = 0


Query: 76  IGVMATKLGMMSFFEPD-GKVIPVTVVGFKEGN-IVTQVKTDATDGYSAVQVGYRRVRDR 135
           +G++ TKLGM   F+ + G  IPVTVV  + G   VTQ+KT  TDGY++VQ+GY  V+++
Sbjct: 3   LGILGTKLGMTQIFDNETGTAIPVTVV--QAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 62

Query: 136 KLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKG 195
            LTKP+LGHL+KA A P+RHL+E+RL+ V G+E  Q +  N +F+ G +VDVSG TIG+G
Sbjct: 63  NLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAITAN-IFEAGQVVDVSGNTIGRG 122

Query: 196 FQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIV 255
           F G  KRHNFKRG M+HGSK+HR  GS GAGTTPGRVY GK+M GR GGTK  +RKL++V
Sbjct: 123 FAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVV 182

Query: 256 KIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQ 287
           ++DE+ N+++IKGA+PGK GNLL +AP+ IVGQ
Sbjct: 183 RVDEEKNLLLIKGAIPGKAGNLLSIAPSNIVGQ 212

[Close]

BLAST of Chy11G205460 vs. ExPASy Swiss-Prot
Match: B0C1D3 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=rplC PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.4e-65
Identity = 122/213 (57.28%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 76  IGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNI-VTQVKTDATDGYSAVQVGYRRVRDRK 135
           +G++ TKLGM   F+  G+ IPVTVV  + G   VTQ+KT  TDGY+A+Q+GY    ++ 
Sbjct: 3   VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 62

Query: 136 LTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGF 195
           LT+PELGHL+K+G+ P+RHLQE+RL  V  +E  Q  +  +LF EG LVD+SGT+IG+GF
Sbjct: 63  LTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQS-ISADLFSEGQLVDISGTSIGRGF 122

Query: 196 QGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 255
            G  KRHNF+RGPM HGSK+HRA GS GAGTTPGR+Y GK+M G+MG  K+ IRKL +V+
Sbjct: 123 AGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVR 182

Query: 256 IDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQN 288
           +D + NV++IKG+VPGKPG LL + PA IVG++
Sbjct: 183 VDAERNVLLIKGSVPGKPGALLNIQPATIVGES 212

[Close]

BLAST of Chy11G205460 vs. ExPASy TrEMBL
Match: A0A1S3CBR5 (50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.1e-154
Identity = 284/293 (96.93%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNP--SSSSFSSLTLRTSFLALPLKSHHKSNLRFHFPTRPT 60
           MSIISFSSASASTKHPIFTNNP  SSSS SSLTLRTSFLALPLKSHHK+NLRFHFPTR T
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTRRT 60

Query: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATD 120
           TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQVKT+ATD
Sbjct: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATD 120

Query: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180
           GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK
Sbjct: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180

Query: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240
           EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG
Sbjct: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240

Query: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Chy11G205460 vs. ExPASy TrEMBL
Match: A0A0A0K9U5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078530 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.2e-154
Identity = 284/294 (96.60%), Postives = 289/294 (98.30%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNP---SSSSFSSLTLRTSFLALPLKSHHKSNLRFHFPTRP 60
           MSIISFSSASASTKHPIFTNNP   SSSS SSLTLRTSFLALPLKSH+K+NLRFHFPTRP
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSLTLRTSFLALPLKSHNKNNLRFHFPTRP 60

Query: 61  TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDAT 120
           TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQVKTDAT
Sbjct: 61  TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELF 180
           DGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVD FEPNQRLVFNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           GRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLR+APAKIVGQNIPK+
Sbjct: 241 GRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 294

[Close]

BLAST of Chy11G205460 vs. ExPASy TrEMBL
Match: A0A5A7TD05 (50S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002680 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.6e-153
Identity = 283/293 (96.59%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNP--SSSSFSSLTLRTSFLALPLKSHHKSNLRFHFPTRPT 60
           MSIISFSSASASTKHPIFTNNP  SSSS SSLTLRTSFLALPLKSHHK+NLRFHF TR T
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFATRRT 60

Query: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATD 120
           TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQVKT+ATD
Sbjct: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATD 120

Query: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180
           GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK
Sbjct: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180

Query: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240
           EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG
Sbjct: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240

Query: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Chy11G205460 vs. ExPASy TrEMBL
Match: A0A6J1KXN5 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499138 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.9e-144
Identity = 264/292 (90.41%), Postives = 279/292 (95.55%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSS-FSSLTLRTSFLALPLKSHHKSNLRFHFPTRPTT 60
           MS+IS SSAS S +HPIFTNN SSSS  SSL LRTSFLALPLKSH  +N+RF FP   TT
Sbjct: 1   MSVISISSASTSKRHPIFTNNASSSSPSSSLKLRTSFLALPLKSHRNNNVRFQFPRPRTT 60

Query: 61  RRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDG 120
           RRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQ+KT+ATDG
Sbjct: 61  RRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEATDG 120

Query: 121 YSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKE 180
           YSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKE
Sbjct: 121 YSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELFKE 180

Query: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240
           GDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGR
Sbjct: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240

Query: 241 MGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           MGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 MGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Chy11G205460 vs. ExPASy TrEMBL
Match: A0A6J1H630 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460446 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.9e-144
Identity = 264/292 (90.41%), Postives = 278/292 (95.21%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSS-FSSLTLRTSFLALPLKSHHKSNLRFHFPTRPTT 60
           MS+IS S AS S +HPIFTNN SSSS  SSL LRTSFLALPLKSH  +NLRF FP   TT
Sbjct: 1   MSVISISLASTSNRHPIFTNNASSSSPSSSLKLRTSFLALPLKSHRNNNLRFQFPRPRTT 60

Query: 61  RRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDG 120
           RRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQ+KT+ATDG
Sbjct: 61  RRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEATDG 120

Query: 121 YSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKE 180
           YSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKE
Sbjct: 121 YSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELFKE 180

Query: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240
           GDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGR
Sbjct: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240

Query: 241 MGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           MGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 MGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Chy11G205460 vs. NCBI nr
Match: XP_008460096.1 (PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo])

HSP 1 Score: 554 bits (1428), Expect = 1.67e-198
Identity = 284/293 (96.93%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSFSS--LTLRTSFLALPLKSHHKSNLRFHFPTRPT 60
           MSIISFSSASASTKHPIFTNNPSSSS SS  LTLRTSFLALPLKSHHK+NLRFHFPTR T
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTRRT 60

Query: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATD 120
           TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQVKT+ATD
Sbjct: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATD 120

Query: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180
           GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK
Sbjct: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180

Query: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240
           EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG
Sbjct: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240

Query: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 291
           RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Chy11G205460 vs. NCBI nr
Match: XP_004154027.1 (50S ribosomal protein L3, chloroplastic [Cucumis sativus] >KGN46258.1 hypothetical protein Csa_005128 [Cucumis sativus])

HSP 1 Score: 553 bits (1426), Expect = 3.50e-198
Identity = 284/294 (96.60%), Postives = 289/294 (98.30%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSFSS---LTLRTSFLALPLKSHHKSNLRFHFPTRP 60
           MSIISFSSASASTKHPIFTNNPSSSS SS   LTLRTSFLALPLKSH+K+NLRFHFPTRP
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSLTLRTSFLALPLKSHNKNNLRFHFPTRP 60

Query: 61  TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDAT 120
           TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQVKTDAT
Sbjct: 61  TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELF 180
           DGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVD FEPNQRLVFNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 291
           GRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLR+APAKIVGQNIPK+
Sbjct: 241 GRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 294

[Close]

BLAST of Chy11G205460 vs. NCBI nr
Match: KAA0039986.1 (50S ribosomal protein L3 [Cucumis melo var. makuwa])

HSP 1 Score: 551 bits (1420), Expect = 2.77e-197
Identity = 283/293 (96.59%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSFSS--LTLRTSFLALPLKSHHKSNLRFHFPTRPT 60
           MSIISFSSASASTKHPIFTNNPSSSS SS  LTLRTSFLALPLKSHHK+NLRFHF TR T
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFATRRT 60

Query: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATD 120
           TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQVKT+ATD
Sbjct: 61  TRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATD 120

Query: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180
           GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK
Sbjct: 121 GYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFK 180

Query: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240
           EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG
Sbjct: 181 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPG 240

Query: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 291
           RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 RMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Chy11G205460 vs. NCBI nr
Match: KAG6574805.1 (50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013387.1 50S ribosomal protein L3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523 bits (1346), Expect = 5.06e-186
Identity = 265/292 (90.75%), Postives = 279/292 (95.55%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSS-FSSLTLRTSFLALPLKSHHKSNLRFHFPTRPTT 60
           MS+IS SSAS S +HPIFTNN SSSS  SSL LRTSFLALPLKSH  +NLRF FP   TT
Sbjct: 1   MSVISISSASTSNRHPIFTNNASSSSPSSSLKLRTSFLALPLKSHRNNNLRFQFPRPRTT 60

Query: 61  RRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDG 120
           RRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQ+KT+ATDG
Sbjct: 61  RRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEATDG 120

Query: 121 YSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKE 180
           YSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKE
Sbjct: 121 YSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELFKE 180

Query: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240
           GDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGR
Sbjct: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240

Query: 241 MGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 291
           MGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 MGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Chy11G205460 vs. NCBI nr
Match: XP_023006396.1 (50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 521 bits (1342), Expect = 2.06e-185
Identity = 264/292 (90.41%), Postives = 279/292 (95.55%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSS-FSSLTLRTSFLALPLKSHHKSNLRFHFPTRPTT 60
           MS+IS SSAS S +HPIFTNN SSSS  SSL LRTSFLALPLKSH  +N+RF FP   TT
Sbjct: 1   MSVISISSASTSKRHPIFTNNASSSSPSSSLKLRTSFLALPLKSHRNNNVRFQFPRPRTT 60

Query: 61  RRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDG 120
           RRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV+PVTVVGFKEGNIVTQ+KT+ATDG
Sbjct: 61  RRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEATDG 120

Query: 121 YSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKE 180
           YSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKE
Sbjct: 121 YSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELFKE 180

Query: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240
           GDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGR
Sbjct: 181 GDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240

Query: 241 MGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 291
           MGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLR+APAKIVG+NIPKN
Sbjct: 241 MGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Chy11G205460 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-108
Identity = 189/230 (82.17%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 62  PSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDGYS 121
           P     V  SMEAGIGVM +KLGMMSFFE DG V+PVTVVGF+EGNIVTQ+KT ATDGY 
Sbjct: 42  PKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYD 101

Query: 122 AVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGD 181
           AVQ+GYRRVRD+KLTKPE GHL+KAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGD
Sbjct: 102 AVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGD 161

Query: 182 LVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 241
           LVDV+GTTIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG
Sbjct: 162 LVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 221

Query: 242 GTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRLAPAKIVGQNIPKN 292
           GT+ KIRKLKIVK+D++LNVVMIKGA+PGKPGNLLR+ PAKIVG NIPKN
Sbjct: 222 GTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of Chy11G205460 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-33
Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 0


Query: 77  GVMATKLGMMSFFEPDGKVIPVTVVGFKEGNIVTQVKTDATDGYSAVQVGYRRVRDRKLT 136
           G++A K GM + ++  GK IP++++ + + NIV+QVKT   +G  A+Q+G  + + + L+
Sbjct: 78  GIIAVKCGMTALWDKWGKRIPISIL-WVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHLS 137

Query: 137 KPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQG 196
           K  +GH    G    R L+EF + + D   P    +    F  G  VDV+G T GKGFQG
Sbjct: 138 KAVVGHFRAQGVPLKRKLREFPV-TEDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQG 197

Query: 197 GIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 256
            +KRH F   P SHG S SHR+ GS G    PG+V+KG+KM GRMG  +R ++ + + KI
Sbjct: 198 CMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYKI 257

Query: 257 DEDLNVVMIKGAVPGKPGNLLRLAPA 282
           D   N++ ++G VPG  GN + +  A
Sbjct: 258 DPARNLMWVRGQVPGAEGNFVFIKDA 281

The following BLAST results are available for this feature:

BLAST of Chy11G205460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80360	3.4e-110	77.57	50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 ...	[more]
Q9SKX4	1.6e-107	82.17	50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
P82191	6.0e-107	71.28	50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=...	[more]
B1XJT9	4.4e-65	58.69	50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR...	[more]
B0C1D3	7.4e-65	57.28	50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 G...	[more]

BLAST of Chy11G205460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBR5	3.1e-154	96.93	50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 ...	[more]
A0A0A0K9U5	5.2e-154	96.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078530 PE=3 SV=1	[more]
A0A5A7TD05	2.6e-153	96.59	50S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1KXN5	2.9e-144	90.41	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H630	4.9e-144	90.41	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Chy11G205460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460096.1	1.67e-198	96.93	PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo]	[more]
XP_004154027.1	3.50e-198	96.60	50S ribosomal protein L3, chloroplastic [Cucumis sativus] >KGN46258.1 hypothetic...	[more]
KAA0039986.1	2.77e-197	96.59	50S ribosomal protein L3 [Cucumis melo var. makuwa]	[more]
KAG6574805.1	5.06e-186	90.75	50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023006396.1	2.06e-185	90.41	50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Chy11G205460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43030.1	1.1e-108	82.17	Ribosomal protein L3 family protein	[more]
AT3G17465.1	1.6e-33	39.81	ribosomal protein L3 plastid	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 171..257 e-value: 3.5E-17 score: 62.5
None	No IPR available	GENE3D	3.30.160.810		coord: 108..167 e-value: 1.7E-20 score: 75.2
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 203..283 e-value: 1.5E-20 score: 75.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..243
None	No IPR available	PANTHER	PTHR11229:SF16	50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC	coord: 70..290
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 77..276 e-value: 3.4E-74 score: 247.0
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 70..290
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 75..282 score: 35.640594
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 177..200
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 76..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G205460.1	Chy11G205460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome