Chy11G204790 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G204790
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	serine/threonine-protein kinase pakD isoform X1
Location	chrH11: 25172283 .. 25172827 (-)
RNA-Seq Expression	Chy11G204790
Synteny	Chy11G204790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGTAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCAAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGATTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGAAGATTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAG

mRNA sequence

ATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGTAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAATTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAG

Coding sequence (CDS)

ATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGTAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAATTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAG

Protein sequence

MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTRIRGRRRGNDASEEEKPNGSYKEKEFDEEKEEAWTKPS*

Homology

[Close]

BLAST of Chy11G204790 vs. ExPASy TrEMBL
Match: A0A0A0KBW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 9.3e-23
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR
Sbjct: 13 MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 72

Query: 61 I 62
          +
Sbjct: 73 V 73

[Close]

BLAST of Chy11G204790 vs. ExPASy TrEMBL
Match: A0A5D3DLW3 (Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001260 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWK TSSK+REITI T NG FNSKANNGN NNN+   NKMRKCTSLKIATSFTR
Sbjct: 13 MEIVGTQWK-TSSKSREITITTPNGTFNSKANNGNKNNNN---NKMRKCTSLKIATSFTR 69

Query: 61 I 62
          +
Sbjct: 73 V 69

[Close]

BLAST of Chy11G204790 vs. ExPASy TrEMBL
Match: A0A1S3CBM1 (serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWK TSSK+REITI T NG FNSKANNGN NNN+   NKMRKCTSLKIATSFTR
Sbjct: 20 MEIVGTQWK-TSSKSREITITTPNGTFNSKANNGNKNNNN---NKMRKCTSLKIATSFTR 76

Query: 61 I 62
          +
Sbjct: 80 V 76

[Close]

BLAST of Chy11G204790 vs. ExPASy TrEMBL
Match: A0A1S3CBJ3 (serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWK TSSK+REITI T NG FNSKANNGN NNN+   NKMRKCTSLKIATSFTR
Sbjct: 19 MEIVGTQWK-TSSKSREITITTPNGTFNSKANNGNKNNNN---NKMRKCTSLKIATSFTR 75

Query: 61 I 62
          +
Sbjct: 79 V 75

[Close]

BLAST of Chy11G204790 vs. ExPASy TrEMBL
Match: A0A6J1KR77 (uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAR-EITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFT 60
          MEIVGTQW+TTSSK+R +  I + NGAFNS +NN        K+NKMRKCTSLKIATSFT
Sbjct: 18 MEIVGTQWRTTSSKSRDQYPIPSPNGAFNSNSNN--------KHNKMRKCTSLKIATSFT 71

Query: 61 RI 62
          R+
Sbjct: 78 RV 71

[Close]

BLAST of Chy11G204790 vs. NCBI nr
Match: XP_004140595.1 (probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 hypothetical protein Csa_005764 [Cucumis sativus])

HSP 1 Score: 114 bits (285), Expect = 3.20e-29
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR
Sbjct: 19 MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 78

[Close]

BLAST of Chy11G204790 vs. NCBI nr
Match: KAA0039919.1 (serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK24581.1 serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 4.66e-19
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWKT SSK+REITI T NG FNSKANNGN NNN+   NKMRKCTSLKIATSFTR
Sbjct: 13 MEIVGTQWKT-SSKSREITITTPNGTFNSKANNGNKNNNN---NKMRKCTSLKIATSFTR 69

[Close]

BLAST of Chy11G204790 vs. NCBI nr
Match: XP_008460011.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 5.30e-19
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWKT SSK+REITI T NG FNSKANNGN NNN+   NKMRKCTSLKIATSFTR
Sbjct: 19 MEIVGTQWKT-SSKSREITITTPNGTFNSKANNGNKNNNN---NKMRKCTSLKIATSFTR 75

[Close]

BLAST of Chy11G204790 vs. NCBI nr
Match: XP_008460010.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 5.42e-19
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTR 60
          MEIVGTQWKT SSK+REITI T NG FNSKANNGN NNN+   NKMRKCTSLKIATSFTR
Sbjct: 20 MEIVGTQWKT-SSKSREITITTPNGTFNSKANNGNKNNNN---NKMRKCTSLKIATSFTR 76

[Close]

BLAST of Chy11G204790 vs. NCBI nr
Match: KAG7025383.1 (hypothetical protein SDJN02_11878, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.8 bits (177), Expect = 2.57e-13
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1  MEIVGTQWKTTSSKARE-ITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFT 60
          MEIVGTQW+TT SK R+   I + NGAFNS      NNNN++K+NKMRKCTSLKIATSFT
Sbjct: 22 MEIVGTQWRTTPSKPRDQYPIPSPNGAFNS------NNNNNNKHNKMRKCTSLKIATSFT 77

The following BLAST results are available for this feature:

BLAST of Chy11G204790 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G204790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBW5	9.3e-23	98.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1	[more]
A0A5D3DLW3	1.6e-14	81.97	Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CBM1	1.6e-14	81.97	serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CBJ3	1.6e-14	81.97	serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KR77	1.2e-09	66.13	uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548...	[more]

BLAST of Chy11G204790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140595.1	3.20e-29	98.36	probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 ...	[more]
KAA0039919.1	4.66e-19	81.97	serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008460011.1	5.30e-19	81.97	PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]	[more]
XP_008460010.1	5.42e-19	81.97	PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]	[more]
KAG7025383.1	2.57e-13	67.74	hypothetical protein SDJN02_11878, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Chy11G204790 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G204790.1	Chy11G204790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity