Chy11G204470 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G204470
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	TPR_REGION domain-containing protein
Location	chrH11: 24902363 .. 24903193 (-)
RNA-Seq Expression	Chy11G204470
Synteny	Chy11G204470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCTCAAATCCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCGGATCACCACCACCATGACCTCCTCGGAAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTGTCTTTCTCCACCACCACTGCTTCTCTTACCTCCTCCCCTGCTTTCTCCGACCACCATCGTGCCGCTGCTCCATCTGGCTTCCGGAGAACCAACTCTGAAGGGAATTTCAATACTGTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGATCCGTTTTCTTTTGATTCTGTCAATTTCAAATCTTCTAAGAAGTTTTGTCATGGCCTCAAACGCTCTATTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGCTAGGACTGAGGAAGATGATGAGGAAGATGAGGAAGATGAGGAGGATGATCGAGAGATTAATTGGAAGGAAGAGCAAGATGGTTTGGGGAATTTTAGCATTAACGCTGCCATTGTAACTCCGGAGGTTAGGGTTATGGAACAAGCTTGGACTAGAGTGGGTGCTGGTGGTGGTGGGATGGAATTTGTGGGTGATTTACGGAAAGAAATGTACCTGGCTAGAGGACTCGGCATCGGAGGAGGACCGGTTGATGGTGGCGGTGGTGGTCGACTGCAGAGTGGAGGCGGCGGTGGGGGAGGAGGTGAAGAATATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGAGCAATGCTCTTGTTTTAAGTAACTACGCAGAGTTCTTGTACCATGCAAGTTCTTTTTACCCTTGTTTCCATTTCTCTACTATGCTATGA

mRNA sequence

ATGCTCCTCAAATCCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCGGATCACCACCACCATGACCTCCTCGGAAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTGTCTTTCTCCACCACCACTGCTTCTCTTACCTCCTCCCCTGCTTTCTCCGACCACCATCGTGCCGCTGCTCCATCTGGCTTCCGGAGAACCAACTCTGAAGGGAATTTCAATACTGTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGATCCGTTTTCTTTTGATTCTGTCAATTTCAAATCTTCTAAGAAGTTTTGTCATGGCCTCAAACGCTCTATTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGCTAGGACTGAGGAAGATGATGAGGAAGATGAGGAAGATGAGGAGGATGATCGAGAGATTAATTGGAAGGAAGAGCAAGATGGTTTGGGGAATTTTAGCATTAACGCTGCCATTGTAACTCCGGAGGTTAGGGTTATGGAACAAGCTTGGACTAGAGTGGGTGCTGGTGGTGGTGGGATGGAATTTGTGGGTGATTTACGGAAAGAAATGTACCTGGCTAGAGGACTCGGCATCGGAGGAGGACCGGTTGATGGTGGCGGTGGTGGTCGACTGCAGAGTGGAGGCGGCGGTGGGGGAGGAGGTGAAGAATATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGAGCAATGCTCTTGTTTTAAGTAACTACGCAGAGTTCTTGTACCATGCAAGTTCTTTTTACCCTTGTTTCCATTTCTCTACTATGCTATGA

Coding sequence (CDS)

ATGCTCCTCAAATCCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCGGATCACCACCACCATGACCTCCTCGGAAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTGTCTTTCTCCACCACCACTGCTTCTCTTACCTCCTCCCCTGCTTTCTCCGACCACCATCGTGCCGCTGCTCCATCTGGCTTCCGGAGAACCAACTCTGAAGGGAATTTCAATACTGTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGATCCGTTTTCTTTTGATTCTGTCAATTTCAAATCTTCTAAGAAGTTTTGTCATGGCCTCAAACGCTCTATTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGCTAGGACTGAGGAAGATGATGAGGAAGATGAGGAAGATGAGGAGGATGATCGAGAGATTAATTGGAAGGAAGAGCAAGATGGTTTGGGGAATTTTAGCATTAACGCTGCCATTGTAACTCCGGAGGTTAGGGTTATGGAACAAGCTTGGACTAGAGTGGGTGCTGGTGGTGGTGGGATGGAATTTGTGGGTGATTTACGGAAAGAAATGTACCTGGCTAGAGGACTCGGCATCGGAGGAGGACCGGTTGATGGTGGCGGTGGTGGTCGACTGCAGAGTGGAGGCGGCGGTGGGGGAGGAGGTGAAGAATATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGAGCAATGCTCTTGTTTTAAGTAACTACGCAGAGTTCTTGTACCATGCAAGTTCTTTTTACCCTTGTTTCCATTTCTCTACTATGCTATGA

Protein sequence

MLLKSSSTPLLGSLLPPDHHHHDLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFSDHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQAWTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYHASSFYPCFHFSTML*

Homology

[Close]

BLAST of Chy11G204470 vs. ExPASy TrEMBL
Match: A0A0A0KA70 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.1e-127
Identity = 240/261 (91.95%), Postives = 247/261 (94.64%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHHDLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFSDH 60
           MLLKSSSTPLLGSLLPPDHHHHDL GKHSPSTFPFHCNNKPLSFSTTTASL+SSPAFSDH
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60

Query: 61  HRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120
           HRAAAPSGFRRTNSEGN NTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI
Sbjct: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120

Query: 121 PSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQAWT 180
           PSFSFYGSRARTE      EE+EE+DREI+ KEE+DGLGNFSI+AAIVTPEVR MEQAW+
Sbjct: 121 PSFSFYGSRARTE------EEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWS 180

Query: 181 RVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEYYK 240
           RVGAGG GM FVGDLRKEMYLARGLGIGGGP DGGGGGRLQ GGGGGGGGEEYGMEEYYK
Sbjct: 181 RVGAGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYK 240

Query: 241 KMVVENPSNALVLSNYAEFLY 262
           KMVVENPSNALVLSNYAEFLY
Sbjct: 241 KMVVENPSNALVLSNYAEFLY 255

[Close]

BLAST of Chy11G204470 vs. ExPASy TrEMBL
Match: A0A5A7TE10 (TPR_11 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001580 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.2e-119
Identity = 228/267 (85.39%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHH--DLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFS 60
           MLLKSSSTPLLGSLLPPDHHHH  DL+GKHSPSTFPFHCNNKPLSFSTTTASL SSP+FS
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFS 60

Query: 61  DHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQ 120
           DHHRA APSGFRRTNSEGN NT+SHAS+VIDVHEDPFS DSVNFKSS KF  GLKRSILQ
Sbjct: 61  DHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSILQ 120

Query: 121 TIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQA 180
           TIPSFSFYGSR RTEED     E+EE+DREI+ +EE+D LGNF INAA++TPEVR MEQA
Sbjct: 121 TIPSFSFYGSRVRTEED-----EEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQA 180

Query: 181 WTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEY 240
           W+RVGAGG GM F GDLRKEMYLARGLGIGGGP DGGGGGRL SGGGGGGGGEEYGMEEY
Sbjct: 181 WSRVGAGGDGMGFGGDLRKEMYLARGLGIGGGPGDGGGGGRLHSGGGGGGGGEEYGMEEY 240

Query: 241 YKKMVVENPSNALVLSNYAEFLYHASS 266
           YKKMVVENP NALVLSNYAEFLY AS+
Sbjct: 241 YKKMVVENPGNALVLSNYAEFLYKASA 262

[Close]

BLAST of Chy11G204470 vs. ExPASy TrEMBL
Match: A0A1S3CCM7 (uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.7e-118
Identity = 224/263 (85.17%), Postives = 239/263 (90.87%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHH--DLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFS 60
           MLLKSSSTPLLGSLLPPDHHHH  DL+GKHSPSTFPFHCNNKPLSFSTTTASL SSP+FS
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFS 60

Query: 61  DHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQ 120
           DHHRA APSGFRRTNSEGN NT+SHAS+VIDVHEDPFS DSVNFKSS KF  GLKRS+LQ
Sbjct: 61  DHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSVLQ 120

Query: 121 TIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQA 180
           TIPSFSFYGSR RTEED     E+EE+DREI+ +EE+D LGNF INAA++TPEVR MEQA
Sbjct: 121 TIPSFSFYGSRVRTEED-----EEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQA 180

Query: 181 WTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEY 240
           W+RVGAGG G+ FVGDLRKEMYLARGLGIGGGP DGGGGGRL +GGGGGGGGEEYGMEEY
Sbjct: 181 WSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEY 240

Query: 241 YKKMVVENPSNALVLSNYAEFLY 262
           YKKMVVENP NALVLSNYAEFLY
Sbjct: 241 YKKMVVENPGNALVLSNYAEFLY 258

[Close]

BLAST of Chy11G204470 vs. ExPASy TrEMBL
Match: A0A7N2MKH3 (TPR_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-28
Identity = 114/292 (39.04%), Postives = 160/292 (54.79%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLP-----PDHHH------HDLLGKHSPSTFPFHCNNK-------PL 60
           MLL+SSSTP+LGSLLP     P+H++      ++++ KH P T P + NN+       PL
Sbjct: 1   MLLRSSSTPVLGSLLPSFSDSPNHNNCNHYETNNIIIKHPPPTIPQNHNNRFSLHQTGPL 60

Query: 61  SFSTTTA-SLTSSPAFSDHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVN 120
           + S  +  S   SP+ +D  R     GFRR  S+GN   +++AS     +ED +    + 
Sbjct: 61  NLSPFSCNSSPISPSIADLDR---NKGFRRAQSDGNLEGLAYAS--CSTNEDQY----IE 120

Query: 121 FKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLG-- 180
               KKF    K ++LQTI SFSFY S+   E++++E+E D EDD E   +E    +   
Sbjct: 121 TNLPKKFSARPKCTMLQTIQSFSFYNSKGEYEDEEDEEESDREDDDEEEREERVMAMRAQ 180

Query: 181 ----NFSINAAIVTPEVRVMEQAWTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGG 240
                  +N+ I+T EV V +Q W      G   E +G   + M+LARG+GIGG    GG
Sbjct: 181 TLSLENKMNSMILTEEVNVKDQIWNM--GIGDEKELLG---QGMFLARGIGIGGASGGGG 240

Query: 241 GGGRLQSGGGGGG----GGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYHA 264
           GG   +  GGG G    G +  G+EEYYK+MV ENP N L L NYA+FLY +
Sbjct: 241 GGNGGRGHGGGSGDFNSGEDNQGVEEYYKRMVEENPGNPLFLRNYAQFLYQS 278

[Close]

BLAST of Chy11G204470 vs. ExPASy TrEMBL
Match: A0A438KDU3 (TPR_REGION domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008661 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.9e-27
Identity = 115/289 (39.79%), Postives = 161/289 (55.71%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLP-----PDHHHHDLLGKHSPSTFPFHCNNK------------PLS 60
           MLL+SSSTP+LGSLLP     P+++  D   KH PST  +  +NK            P+S
Sbjct: 1   MLLRSSSTPVLGSLLPCHSESPNNNLSDATAKHPPSTI-YQAHNKLSLHQTGSLNLSPVS 60

Query: 61  FSTTTASLTSSPAFSDHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFK 120
           F+++      SP+ +  HR     GFRR  S+GN   +++AS     + D  S  +++ K
Sbjct: 61  FNSSPI----SPSVNAGHR-----GFRRAQSDGNLKGLAYAS---CNNNDELSTPNLSKK 120

Query: 121 SSKKFCHGLKRSILQTIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSI 180
           SS++      RS+LQTIPSFSFYG  +R  E++E DEE+EE++ E  W+E  D  G   +
Sbjct: 121 SSQR----PSRSMLQTIPSFSFYG-LSRMNEEEENDEEEEEEEEEGEWEELGDNDGERFM 180

Query: 181 ---NAAIVTPEVRVM--EQAWTRVGAGGGGMEFVGDLRKEMYLARGLGIG----GGPVDG 240
              +  +    +++M   +  +R  A     E VG    EMYLARG G+     GG   G
Sbjct: 181 AMGDRELSFENIKMMGIRENGSRNVAFEEEKEVVG---SEMYLARGAGVSGVDFGGRGGG 240

Query: 241 GGGGRLQSGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYHA 264
           GGGG     G GG  G+  G+EEYYK+M+ ENPSN L L NYA+FLY +
Sbjct: 241 GGGGDFTPRGSGGESGDRPGVEEYYKRMLEENPSNPLFLRNYAQFLYQS 268

[Close]

BLAST of Chy11G204470 vs. NCBI nr
Match: XP_004140576.2 (uncharacterized protein LOC101206684 [Cucumis sativus])

HSP 1 Score: 459 bits (1181), Expect = 3.14e-160
Identity = 240/261 (91.95%), Postives = 247/261 (94.64%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHHDLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFSDH 60
           MLLKSSSTPLLGSLLPPDHHHHDL GKHSPSTFPFHCNNKPLSFSTTTASL+SSPAFSDH
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60

Query: 61  HRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120
           HRAAAPSGFRRTNSEGN NTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI
Sbjct: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120

Query: 121 PSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQAWT 180
           PSFSFYGSRARTEE      E+EE+DREI+ KEE+DGLGNFSI+AAIVTPEVR MEQAW+
Sbjct: 121 PSFSFYGSRARTEE------EEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWS 180

Query: 181 RVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEYYK 240
           RVGAGG GM FVGDLRKEMYLARGLGIGGGP DGGGGGRLQ GGGGGGGGEEYGMEEYYK
Sbjct: 181 RVGAGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYK 240

Query: 241 KMVVENPSNALVLSNYAEFLY 261
           KMVVENPSNALVLSNYAEFLY
Sbjct: 241 KMVVENPSNALVLSNYAEFLY 255

[Close]

BLAST of Chy11G204470 vs. NCBI nr
Match: KAA0039891.1 (TPR_11 domain-containing protein [Cucumis melo var. makuwa] >TYK24611.1 Tetratricopeptide repeat-like superfamily protein, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 432 bits (1112), Expect = 1.45e-149
Identity = 228/267 (85.39%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHH--DLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFS 60
           MLLKSSSTPLLGSLLPPDHHHH  DL+GKHSPSTFPFHCNNKPLSFSTTTASL SSP+FS
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFS 60

Query: 61  DHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQ 120
           DHHRA APSGFRRTNSEGN NT+SHAS+VIDVHEDPFS DSVNFKSS KF  GLKRSILQ
Sbjct: 61  DHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSILQ 120

Query: 121 TIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQA 180
           TIPSFSFYGSR RTEED+EE+E     DREI+ +EE+D LGNF INAA++TPEVR MEQA
Sbjct: 121 TIPSFSFYGSRVRTEEDEEEEE-----DREIDTEEEEDDLGNFGINAAVITPEVRAMEQA 180

Query: 181 WTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEY 240
           W+RVGAGG GM F GDLRKEMYLARGLGIGGGP DGGGGGRL SGGGGGGGGEEYGMEEY
Sbjct: 181 WSRVGAGGDGMGFGGDLRKEMYLARGLGIGGGPGDGGGGGRLHSGGGGGGGGEEYGMEEY 240

Query: 241 YKKMVVENPSNALVLSNYAEFLYHASS 265
           YKKMVVENP NALVLSNYAEFLY AS+
Sbjct: 241 YKKMVVENPGNALVLSNYAEFLYKASA 262

[Close]

BLAST of Chy11G204470 vs. NCBI nr
Match: XP_008459965.1 (PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo])

HSP 1 Score: 429 bits (1103), Expect = 2.56e-148
Identity = 224/263 (85.17%), Postives = 239/263 (90.87%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHH--DLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFS 60
           MLLKSSSTPLLGSLLPPDHHHH  DL+GKHSPSTFPFHCNNKPLSFSTTTASL SSP+FS
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFS 60

Query: 61  DHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQ 120
           DHHRA APSGFRRTNSEGN NT+SHAS+VIDVHEDPFS DSVNFKSS KF  GLKRS+LQ
Sbjct: 61  DHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSVLQ 120

Query: 121 TIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQA 180
           TIPSFSFYGSR RTEED+EE+E     DREI+ +EE+D LGNF INAA++TPEVR MEQA
Sbjct: 121 TIPSFSFYGSRVRTEEDEEEEE-----DREIDTEEEEDDLGNFGINAAVITPEVRAMEQA 180

Query: 181 WTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEY 240
           W+RVGAGG G+ FVGDLRKEMYLARGLGIGGGP DGGGGGRL +GGGGGGGGEEYGMEEY
Sbjct: 181 WSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEY 240

Query: 241 YKKMVVENPSNALVLSNYAEFLY 261
           YKKMVVENP NALVLSNYAEFLY
Sbjct: 241 YKKMVVENPGNALVLSNYAEFLY 258

[Close]

BLAST of Chy11G204470 vs. NCBI nr
Match: KGN46380.2 (hypothetical protein Csa_005429 [Cucumis sativus])

HSP 1 Score: 421 bits (1083), Expect = 1.26e-145
Identity = 222/261 (85.06%), Postives = 229/261 (87.74%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDHHHHDLLGKHSPSTFPFHCNNKPLSFSTTTASLTSSPAFSDH 60
           MLLKSSSTPLLGSLLPPDHHHHDL GKHSPSTFPFHCNNKPLSFSTTTASL+SSPAFSDH
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60

Query: 61  HRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120
           HRAAAPSGFRRTNSEGN NTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI
Sbjct: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120

Query: 121 PSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSINAAIVTPEVRVMEQAWT 180
           PSFSFYGSRARTEE      E+EE+DREI+ KEE+DGLGNFSI+AAIVTPEVR MEQAW+
Sbjct: 121 PSFSFYGSRARTEE------EEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWS 180

Query: 181 RVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGGEEYGMEEYYK 240
           RVGAGG GM FVGDLRKEMYLARGLGIGGGP                    EYGMEEYYK
Sbjct: 181 RVGAGGDGMGFVGDLRKEMYLARGLGIGGGP--------------------EYGMEEYYK 235

Query: 241 KMVVENPSNALVLSNYAEFLY 261
           KMVVENPSNALVLSNYAEFLY
Sbjct: 241 KMVVENPSNALVLSNYAEFLY 235

[Close]

BLAST of Chy11G204470 vs. NCBI nr
Match: KAG6576080.1 (hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304 bits (778), Expect = 2.02e-100
Identity = 183/275 (66.55%), Postives = 207/275 (75.27%), Query Frame = 0


Query: 1   MLLKSSSTPLLGSLLPPDH--HHHDLLGKHSPST----FPFHCNNKPLSFSTTTASLTSS 60
           MLL+SSSTPLL SLLPPDH  HHHD +GKHSPS     F F CNNKPLSFS         
Sbjct: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60

Query: 61  PAFSDHHRAAAPSGFRRTNSEGNFNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKR 120
               DHHRAA P+GFRRT+SEGN  T+SHASDVIDVHEDPFSFDS NFK S K  H   R
Sbjct: 61  ----DHHRAA-PTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120

Query: 121 SILQTIPSFSFYGSRARTEEDDEEDEEDEEDDREINWKEEQDGLGNFSIN----AAIVTP 180
           S+L+TIPSFSFYGSRARTEE+D+ED     DD+  + +E++  L NF ++    AAIVTP
Sbjct: 121 SVLETIPSFSFYGSRARTEEEDDED-----DDQHADPEEDEVALENFGVHNRMDAAIVTP 180

Query: 181 EVRVMEQAWTRVGAGGGGMEFVGDLRKEMYLARGLGIGGGPVDGGGGGRLQSGGGGGGGG 240
            VR MEQAWTR+ +G G + FVGDL+KEM+LARG G GGG   GGGGGR +SGG  GGGG
Sbjct: 181 GVRAMEQAWTRMNSGDG-IGFVGDLQKEMHLARGPGGGGGG--GGGGGRRRSGG--GGGG 240

Query: 241 EEYGMEEYYKKMVVENPSNALVLSNYAEFLYHASS 265
           E++GMEEYYKKMVVENP NALVLSNYAEFLY A S
Sbjct: 241 EQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARS 251

The following BLAST results are available for this feature:

BLAST of Chy11G204470 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G204470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA70	5.1e-127	91.95	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 ...	[more]
A0A5A7TE10	5.2e-119	85.39	TPR_11 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CCM7	5.7e-118	85.17	uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=...	[more]
A0A7N2MKH3	2.5e-28	39.04	TPR_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A438KDU3	7.9e-27	39.79	TPR_REGION domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008661 ...	[more]

BLAST of Chy11G204470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140576.2	3.14e-160	91.95	uncharacterized protein LOC101206684 [Cucumis sativus]	[more]
KAA0039891.1	1.45e-149	85.39	TPR_11 domain-containing protein [Cucumis melo var. makuwa] >TYK24611.1 Tetratri...	[more]
XP_008459965.1	2.56e-148	85.17	PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]	[more]
KGN46380.2	1.26e-145	85.06	hypothetical protein Csa_005429 [Cucumis sativus]	[more]
KAG6576080.1	2.02e-100	66.55	hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Chy11G204470 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..75
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..262
None	No IPR available	PANTHER	PTHR26312:SF78	OSJNBA0004N05.2 PROTEIN	coord: 1..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G204470.1	Chy11G204470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009833	plant-type primary cell wall biogenesis
biological_process	GO:0006396	RNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0046872	metal ion binding