Chy11G200980 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G200980
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	UDP-glucuronate decarboxylase
Location	chrH11: 21808880 .. 21809747 (-)
RNA-Seq Expression	Chy11G200980
Synteny	Chy11G200980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATCCTGAGCTTCTTCGAAGAAATCATTCCAATCCGTCTCCGGTGATCGATTCACCACGGACTCCGCCATGTTCTTCCGTCAAATCCAGGAGTCCGATCCGTTACATGCTTCGTGAGCAACGTCTTCTCTTTGTTTTTGTCGGTATCGCCATTGCAACTCTGTTTTTTAATGTCGTCCGTTTCACTTTTCCGCCGGAGTTACGTGATGATCATCACCGGGCGTTTAATTCGTTTGTTCGATTGGATTCGACGATCCCGATGCGGAGAGTTTTGTATGAAACTCGCCGTGAAGGACCGTTAGGGCGGGTGAATTTGGCGGGGAAAGTTCCGCCGGGATTGACGAAGAGGAACTTGAGGATTGTTGTTACTGGTGGTGCTGGATTCGTTGGAAGCCATCTTGTGGACCGTTTGATTGAGAGAGGGGATAGCGTGATCGTTGTTGATAATTTCTTCACTGGACGGAAGGATAATCTGGTTCATCATTTTGGAAATCCGAGATTTGAACTGATTCGACACGACGTTGTTCAGCCGATTCTACTGGAAGTTGATCAGATCTATCACTTGGCTTGCCCTGCTTCTCCTGTTCATTATAAATTCAATCCTGTCAAGACAATCATATCCTTCTTGTTCTTCTTCCTCCATTTTCTTTTAATTTTCACCTTTTTCGTAACAAAATTTATTTCAAATCGTAATATCTTAATCTTAGGGCTACGGAATTAACGCACAGCAAGAATCTAATGAAGCAGTTCAACTTCAAAATCACGCTGGAATTTTCTTCTCCGAATCTTTTTTTTTTCTTATTGAGATTGTTCATTCTTTTTTCTCTGATTCTGGAAATTCTTCTTCTGACTATGAGAATTGA

mRNA sequence

ATGAATAATCCTGAGCTTCTTCGAAGAAATCATTCCAATCCGTCTCCGGTGATCGATTCACCACGGACTCCGCCATGTTCTTCCGTCAAATCCAGGAGTCCGATCCGTTACATGCTTCGTGAGCAACGTCTTCTCTTTGTTTTTGTCGGTATCGCCATTGCAACTCTGTTTTTTAATGTCGTCCGTTTCACTTTTCCGCCGGAGTTACGTGATGATCATCACCGGGCGTTTAATTCGTTTGTTCGATTGGATTCGACGATCCCGATGCGGAGAGTTTTGTATGAAACTCGCCGTGAAGGACCGTTAGGGCGGGTGAATTTGGCGGGGAAAGTTCCGCCGGGATTGACGAAGAGGAACTTGAGGATTGTTGTTACTGGTGGTGCTGGATTCGTTGGAAGCCATCTTGTGGACCGTTTGATTGAGAGAGGGGATAGCGTGATCGTTGTTGATAATTTCTTCACTGGACGGAAGGATAATCTGGTTCATCATTTTGGAAATCCGAGATTTGAACTGATTCGACACGACGTTGTTCAGCCGATTCTACTGGAAGTTGATCAGATCTATCACTTGGCTTGCCCTGCTTCTCCTGGCTACGGAATTAACGCACAGCAAGAATCTAATGAAGCAGTTCAACTTCAAAATCACGCTGGAATTTTCTTCTCCGAATCTTTTTTTTTTCTTATTGAGATTGTTCATTCTTTTTTCTCTGATTCTGGAAATTCTTCTTCTGACTATGAGAATTGA

Coding sequence (CDS)

ATGAATAATCCTGAGCTTCTTCGAAGAAATCATTCCAATCCGTCTCCGGTGATCGATTCACCACGGACTCCGCCATGTTCTTCCGTCAAATCCAGGAGTCCGATCCGTTACATGCTTCGTGAGCAACGTCTTCTCTTTGTTTTTGTCGGTATCGCCATTGCAACTCTGTTTTTTAATGTCGTCCGTTTCACTTTTCCGCCGGAGTTACGTGATGATCATCACCGGGCGTTTAATTCGTTTGTTCGATTGGATTCGACGATCCCGATGCGGAGAGTTTTGTATGAAACTCGCCGTGAAGGACCGTTAGGGCGGGTGAATTTGGCGGGGAAAGTTCCGCCGGGATTGACGAAGAGGAACTTGAGGATTGTTGTTACTGGTGGTGCTGGATTCGTTGGAAGCCATCTTGTGGACCGTTTGATTGAGAGAGGGGATAGCGTGATCGTTGTTGATAATTTCTTCACTGGACGGAAGGATAATCTGGTTCATCATTTTGGAAATCCGAGATTTGAACTGATTCGACACGACGTTGTTCAGCCGATTCTACTGGAAGTTGATCAGATCTATCACTTGGCTTGCCCTGCTTCTCCTGGCTACGGAATTAACGCACAGCAAGAATCTAATGAAGCAGTTCAACTTCAAAATCACGCTGGAATTTTCTTCTCCGAATCTTTTTTTTTTCTTATTGAGATTGTTCATTCTTTTTTCTCTGATTCTGGAAATTCTTCTTCTGACTATGAGAATTGA

Protein sequence

MNNPELLRRNHSNPSPVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILLEVDQIYHLACPASPGYGINAQQESNEAVQLQNHAGIFFSESFFFLIEIVHSFFSDSGNSSSDYEN*

Homology

[Close]

BLAST of Chy11G200980 vs. ExPASy Swiss-Prot
Match: Q9LZI2 (UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-48
Identity = 109/200 (54.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 5   ELLRRNHSNPSPVIDSPRTPPCSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRF 64
           EL+ R H    P  D+    P         P+RYMLREQRL+FV VGIAIATL F +   
Sbjct: 4   ELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI--- 63

Query: 65  TFPPELRD-DHHRAFNSF-VRLD-STIPMRRVLYETRREGPLGRVN----LAGKVPPGLT 124
            FP   +   +   F+ + +R D S +P      + +R+  L  +N      GK+P GL 
Sbjct: 64  -FPRSTQSTPYSDPFSGYGIRPDESYVP----AIQAQRKPSLEYLNRIGATGGKIPLGLK 123

Query: 125 KRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDV 184
           ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRHDV
Sbjct: 124 RKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDV 183

Query: 185 VQPILLEVDQIYHLACPASP 197
           V+PILLEVDQIYHLACPASP
Sbjct: 184 VEPILLEVDQIYHLACPASP 195

[Close]

BLAST of Chy11G200980 vs. ExPASy Swiss-Prot
Match: Q8S8T4 (UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.7e-47
Identity = 110/202 (54.46%), Postives = 133/202 (65.84%), Query Frame = 0


Query: 5   ELLRRNHSNPSPVIDSPRTPPCSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNV--- 64
           EL  R H    P  +S    P      +  PIRYMLREQRL+FV VGIAIATL F +   
Sbjct: 4   ELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTIFSK 63

Query: 65  ------VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPG 124
                 + +   P L     R+ +S+  L +TI  +  +    R G  G     GK+P G
Sbjct: 64  SSNHQPIPYDVDP-LSGYGMRSESSY--LPATIHKKPSIEYMSRIGSAG-----GKIPLG 123

Query: 125 LTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRH 184
           L ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRH
Sbjct: 124 LKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRH 183

Query: 185 DVVQPILLEVDQIYHLACPASP 197
           DVV+PILLEVDQIYHLACPASP
Sbjct: 184 DVVEPILLEVDQIYHLACPASP 197

[Close]

BLAST of Chy11G200980 vs. ExPASy Swiss-Prot
Match: Q8VZC0 (UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.8e-42
Identity = 102/194 (52.58%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 5   ELLRRNHSNP-SP-VIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVR 64
           E +  + S+P SP  +  PR+ P S       + Y+ REQRLLF+ VGI I + FF +  
Sbjct: 15  ETIPMSQSSPYSPKTLKHPRSLPRS-------LHYLFREQRLLFILVGILIGSTFFILQP 74

Query: 65  FTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNLRI 124
                   +       S     +  P  R  + +   G  GR    G+VP G+ ++ LRI
Sbjct: 75  SLSRLGAAESTSLITRSVSYAVTDSPPSRSTFNSGGGG--GR---TGRVPVGIGRKRLRI 134

Query: 125 VVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILL 184
           VVTGGAGFVGSHLVD+LI RGD VIV+DNFFTGRK+NLVH F NPRFELIRHDVV+PILL
Sbjct: 135 VVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPILL 194

Query: 185 EVDQIYHLACPASP 197
           EVDQIYHLACPASP
Sbjct: 195 EVDQIYHLACPASP 196

[Close]

BLAST of Chy11G200980 vs. ExPASy Swiss-Prot
Match: Q9SN95 (UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 55/79 (69.62%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 119 NLRIVVTGGAGFVGSHLVDRLIE-RGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVV 178
           N+RI+++GGAGF+GSHLVD+L+E   + VIV DN+FTG KDNL    G+PRFELIRHDV 
Sbjct: 28  NMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 87

Query: 179 QPILLEVDQIYHLACPASP 197
           +P+L+EVDQIYHLACPASP
Sbjct: 88  EPLLIEVDQIYHLACPASP 106

[Close]

BLAST of Chy11G200980 vs. ExPASy Swiss-Prot
Match: Q9ZV36 (UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26
Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 119 NLRIVVTGGAGFVGSHLVDRLIE-RGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVV 178
           N+RI+VTGGAGF+GSHLVD+L++   + VIV DN+FTG KDNL    G+PRFELIRHDV 
Sbjct: 30  NMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 89

Query: 179 QPILLEVDQIYHLACPASP 197
           +P+ +EVDQIYHLACPASP
Sbjct: 90  EPLFVEVDQIYHLACPASP 108

[Close]

BLAST of Chy11G200980 vs. ExPASy TrEMBL
Match: A0A0A0KF37 (UDP-glucuronate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_6G319800 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MNNPELLRRNHSNPSPVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60
           MNN ELLRRN SN SPVIDSPRTPP SSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV
Sbjct: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60

Query: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNL 120
           VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAG+VPPGLTKRNL
Sbjct: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120

Query: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180
           RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI
Sbjct: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180

Query: 181 LLEVDQIYHLACPASP 197
           LLEVDQIYHLACPASP
Sbjct: 181 LLEVDQIYHLACPASP 196

[Close]

BLAST of Chy11G200980 vs. ExPASy TrEMBL
Match: A0A1S3C7Y3 (UDP-glucuronate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103497844 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.3e-99
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MNNPELLRRNHSNPSP-VIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFN 60
           MNN +LLRRN SNPSP VIDSPRTPPCSS K+RSPIRYMLREQRLLFVFVGIAIATLFFN
Sbjct: 1   MNNSDLLRRNQSNPSPAVIDSPRTPPCSSCKTRSPIRYMLREQRLLFVFVGIAIATLFFN 60

Query: 61  VVRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRN 120
           VVRFTFPPELRDDHHRA NSFVRL STIPMRRVLYETRREG LGRVNLAG+VPPGL  +N
Sbjct: 61  VVRFTFPPELRDDHHRALNSFVRLGSTIPMRRVLYETRREGSLGRVNLAGRVPPGLKNKN 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180
           LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180

Query: 181 ILLEVDQIYHLACPASP 197
           ILLEVDQIYHLACPASP
Sbjct: 181 ILLEVDQIYHLACPASP 197

[Close]

BLAST of Chy11G200980 vs. ExPASy TrEMBL
Match: A0A6J1H7L0 (UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111460303 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.4e-83
Identity = 164/201 (81.59%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 3   NPELLRRNHSNP-----SPVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           N EL RRN SNP     + VI  PRTP   S K RSPIRYMLREQRLLFVF+GIAIATL 
Sbjct: 2   NSELFRRNQSNPTLQTKNSVIGPPRTPAGCSSKFRSPIRYMLREQRLLFVFIGIAIATLL 61

Query: 63  FNVVRFTFPPELRDD--HHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGL 122
           FNVVR TFP ELRDD  +    N FVRLDS+IPMRRVLYETRREG LGRVN+AGKVPPGL
Sbjct: 62  FNVVRLTFPLELRDDQRYRAELNPFVRLDSSIPMRRVLYETRREGSLGRVNMAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KRNLRIVVTGGAGFVGSHLVDRL+ERGD+VIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRNLRIVVTGGAGFVGSHLVDRLMERGDNVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASP 197
           VV+PILLEVDQI+HLACPASP
Sbjct: 182 VVEPILLEVDQIFHLACPASP 202

[Close]

BLAST of Chy11G200980 vs. ExPASy TrEMBL
Match: A0A6J1L4B9 (UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111499022 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.3e-83
Identity = 162/201 (80.60%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 3   NPELLRRNHSNP-----SPVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           N EL RRN SNP     + VI  PRTP   S+K RSPIRYMLREQRLLFVF+G+AIATL 
Sbjct: 2   NSELFRRNQSNPTLQTHNSVIGPPRTPAGCSIKFRSPIRYMLREQRLLFVFIGVAIATLL 61

Query: 63  FNVVRFTFPPELRDD--HHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGL 122
           FNVVR TFP ELRDD  +  A N+FVRLDS+IPMRRVLYET REG LGRVN+AGKVPPGL
Sbjct: 62  FNVVRLTFPLELRDDQRYQAALNAFVRLDSSIPMRRVLYETHREGSLGRVNMAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KR LRIVVTGGAGFVGSHLVDRL+ERGD+VIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRILRIVVTGGAGFVGSHLVDRLMERGDNVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASP 197
           VV+PILLEVDQI+HLACPASP
Sbjct: 182 VVEPILLEVDQIFHLACPASP 202

[Close]

BLAST of Chy11G200980 vs. ExPASy TrEMBL
Match: A0A6J1CA79 (UDP-glucuronate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111009636 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.7e-77
Identity = 155/191 (81.15%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 9   RNHSNPSP--VIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRFTFP 68
           RN  N S   V D PR+P  SS KSR+PI+Y+LREQRLLFVFVG+AIATLFFNVVRF  P
Sbjct: 5   RNQPNASSQLVADPPRSPRGSSGKSRNPIQYVLREQRLLFVFVGVAIATLFFNVVRFVLP 64

Query: 69  PELRDDHHRA-FNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNLRIVVT 128
           PELRD    A  + FV L+STIP RRVLYETRREG LGRV   GKVPPGL KRNLRIVVT
Sbjct: 65  PELRDHPREAVLDPFVELESTIPTRRVLYETRREGGLGRVISPGKVPPGLRKRNLRIVVT 124

Query: 129 GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILLEVD 188
           GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRK+NLVHH GNPRFELIRHDVVQPILLEVD
Sbjct: 125 GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENLVHHLGNPRFELIRHDVVQPILLEVD 184

Query: 189 QIYHLACPASP 197
           QIYHLACPASP
Sbjct: 185 QIYHLACPASP 195

[Close]

BLAST of Chy11G200980 vs. NCBI nr
Match: KGN47434.1 (hypothetical protein Csa_021708 [Cucumis sativus])

HSP 1 Score: 382 bits (982), Expect = 3.93e-132
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MNNPELLRRNHSNPSPVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60
           MNN ELLRRN SN SPVIDSPRTPP SSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV
Sbjct: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60

Query: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNL 120
           VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAG+VPPGLTKRNL
Sbjct: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120

Query: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180
           RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI
Sbjct: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180

Query: 181 LLEVDQIYHLACPASP 196
           LLEVDQIYHLACPASP
Sbjct: 181 LLEVDQIYHLACPASP 196

[Close]

BLAST of Chy11G200980 vs. NCBI nr
Match: XP_031743802.1 (LOW QUALITY PROTEIN: UDP-glucuronic acid decarboxylase 2 [Cucumis sativus])

HSP 1 Score: 382 bits (982), Expect = 4.36e-129
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MNNPELLRRNHSNPSPVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60
           MNN ELLRRN SN SPVIDSPRTPP SSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV
Sbjct: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60

Query: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNL 120
           VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAG+VPPGLTKRNL
Sbjct: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120

Query: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180
           RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI
Sbjct: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180

Query: 181 LLEVDQIYHLACPASP 196
           LLEVDQIYHLACPASP
Sbjct: 181 LLEVDQIYHLACPASP 196

[Close]

BLAST of Chy11G200980 vs. NCBI nr
Match: XP_008458422.1 (PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Cucumis melo])

HSP 1 Score: 367 bits (942), Expect = 5.37e-123
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MNNPELLRRNHSNPSP-VIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFN 60
           MNN +LLRRN SNPSP VIDSPRTPPCSS K+RSPIRYMLREQRLLFVFVGIAIATLFFN
Sbjct: 1   MNNSDLLRRNQSNPSPAVIDSPRTPPCSSCKTRSPIRYMLREQRLLFVFVGIAIATLFFN 60

Query: 61  VVRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRN 120
           VVRFTFPPELRDDHHRA NSFVRL STIPMRRVLYETRREG LGRVNLAG+VPPGL  +N
Sbjct: 61  VVRFTFPPELRDDHHRALNSFVRLGSTIPMRRVLYETRREGSLGRVNLAGRVPPGLKNKN 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180
           LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180

Query: 181 ILLEVDQIYHLACPASP 196
           ILLEVDQIYHLACPASP
Sbjct: 181 ILLEVDQIYHLACPASP 197

[Close]

BLAST of Chy11G200980 vs. NCBI nr
Match: XP_038875623.1 (UDP-glucuronic acid decarboxylase 2-like [Benincasa hispida])

HSP 1 Score: 327 bits (838), Expect = 3.66e-107
Identity = 170/201 (84.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 3   NPELLRRNHSNPSP-----VIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           N ELLRRN  NP+P     VIDSPRTP  SS KSRSPIRYMLREQRLLFVFVGIAIATLF
Sbjct: 2   NSELLRRNQPNPTPQTQNPVIDSPRTPAGSSCKSRSPIRYMLREQRLLFVFVGIAIATLF 61

Query: 63  FNVVRFTFPPELRDDHH--RAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGL 122
           F+  RF FP ELRDDH    A N F++LDSTIPMRRVLYETRREG LGRVN AGKVPPGL
Sbjct: 62  FSFGRFAFPLELRDDHRYQSALNPFIQLDSTIPMRRVLYETRREGSLGRVNFAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASP 196
           VV+ +LLEVDQIYHLACPASP
Sbjct: 182 VVESLLLEVDQIYHLACPASP 202

[Close]

BLAST of Chy11G200980 vs. NCBI nr
Match: KAG6575072.1 (UDP-glucuronic acid decarboxylase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315 bits (808), Expect = 1.41e-102
Identity = 166/201 (82.59%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 3   NPELLRRNHSNPS-----PVIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           N EL RRN SNP+      VI  PRTP   S K RSPIRYMLREQRLLFVF+GIAIATL 
Sbjct: 2   NSELFRRNQSNPTLQTQNSVIGPPRTPAGCSSKFRSPIRYMLREQRLLFVFIGIAIATLL 61

Query: 63  FNVVRFTFPPELRDDH-HRA-FNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGL 122
           FNVVR TFP ELRDD  +RA  N FVRLDS+IPMRRVLYETRREG LGRVN+AGKVPPGL
Sbjct: 62  FNVVRLTFPLELRDDQRYRAELNPFVRLDSSIPMRRVLYETRREGSLGRVNMAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KRNLRIVVTGGAGFVGSHLVDRL+ERGD+VIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRNLRIVVTGGAGFVGSHLVDRLMERGDNVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASP 196
           VV+PILLEVDQI+HLACPASP
Sbjct: 182 VVEPILLEVDQIFHLACPASP 202

[Close]

BLAST of Chy11G200980 vs. TAIR 10
Match: AT3G62830.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 109/200 (54.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 5   ELLRRNHSNPSPVIDSPRTPPCSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRF 64
           EL+ R H    P  D+    P         P+RYMLREQRL+FV VGIAIATL F +   
Sbjct: 4   ELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI--- 63

Query: 65  TFPPELRD-DHHRAFNSF-VRLD-STIPMRRVLYETRREGPLGRVN----LAGKVPPGLT 124
            FP   +   +   F+ + +R D S +P      + +R+  L  +N      GK+P GL 
Sbjct: 64  -FPRSTQSTPYSDPFSGYGIRPDESYVP----AIQAQRKPSLEYLNRIGATGGKIPLGLK 123

Query: 125 KRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDV 184
           ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRHDV
Sbjct: 124 RKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDV 183

Query: 185 VQPILLEVDQIYHLACPASP 197
           V+PILLEVDQIYHLACPASP
Sbjct: 184 VEPILLEVDQIYHLACPASP 195

[Close]

BLAST of Chy11G200980 vs. TAIR 10
Match: AT3G62830.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 109/200 (54.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 5   ELLRRNHSNPSPVIDSPRTPPCSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRF 64
           EL+ R H    P  D+    P         P+RYMLREQRL+FV VGIAIATL F +   
Sbjct: 4   ELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI--- 63

Query: 65  TFPPELRD-DHHRAFNSF-VRLD-STIPMRRVLYETRREGPLGRVN----LAGKVPPGLT 124
            FP   +   +   F+ + +R D S +P      + +R+  L  +N      GK+P GL 
Sbjct: 64  -FPRSTQSTPYSDPFSGYGIRPDESYVP----AIQAQRKPSLEYLNRIGATGGKIPLGLK 123

Query: 125 KRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDV 184
           ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRHDV
Sbjct: 124 RKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDV 183

Query: 185 VQPILLEVDQIYHLACPASP 197
           V+PILLEVDQIYHLACPASP
Sbjct: 184 VEPILLEVDQIYHLACPASP 195

[Close]

BLAST of Chy11G200980 vs. TAIR 10
Match: AT2G47650.1 (UDP-xylose synthase 4 )

HSP 1 Score: 188.7 bits (478), Expect = 5.5e-48
Identity = 110/202 (54.46%), Postives = 133/202 (65.84%), Query Frame = 0


Query: 5   ELLRRNHSNPSPVIDSPRTPPCSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNV--- 64
           EL  R H    P  +S    P      +  PIRYMLREQRL+FV VGIAIATL F +   
Sbjct: 4   ELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTIFSK 63

Query: 65  ------VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPG 124
                 + +   P L     R+ +S+  L +TI  +  +    R G  G     GK+P G
Sbjct: 64  SSNHQPIPYDVDP-LSGYGMRSESSY--LPATIHKKPSIEYMSRIGSAG-----GKIPLG 123

Query: 125 LTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRH 184
           L ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRH
Sbjct: 124 LKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRH 183

Query: 185 DVVQPILLEVDQIYHLACPASP 197
           DVV+PILLEVDQIYHLACPASP
Sbjct: 184 DVVEPILLEVDQIYHLACPASP 197

[Close]

BLAST of Chy11G200980 vs. TAIR 10
Match: AT2G47650.2 (UDP-xylose synthase 4 )

HSP 1 Score: 188.7 bits (478), Expect = 5.5e-48
Identity = 110/202 (54.46%), Postives = 133/202 (65.84%), Query Frame = 0


Query: 5   ELLRRNHSNPSPVIDSPRTPPCSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNV--- 64
           EL  R H    P  +S    P      +  PIRYMLREQRL+FV VGIAIATL F +   
Sbjct: 4   ELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTIFSK 63

Query: 65  ------VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPG 124
                 + +   P L     R+ +S+  L +TI  +  +    R G  G     GK+P G
Sbjct: 64  SSNHQPIPYDVDP-LSGYGMRSESSY--LPATIHKKPSIEYMSRIGSAG-----GKIPLG 123

Query: 125 LTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRH 184
           L ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRH
Sbjct: 124 LKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRH 183

Query: 185 DVVQPILLEVDQIYHLACPASP 197
           DVV+PILLEVDQIYHLACPASP
Sbjct: 184 DVVEPILLEVDQIYHLACPASP 197

[Close]

BLAST of Chy11G200980 vs. TAIR 10
Match: AT3G53520.1 (UDP-glucuronic acid decarboxylase 1 )

HSP 1 Score: 171.8 bits (434), Expect = 7.0e-43
Identity = 102/194 (52.58%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 5   ELLRRNHSNP-SP-VIDSPRTPPCSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVR 64
           E +  + S+P SP  +  PR+ P S       + Y+ REQRLLF+ VGI I + FF +  
Sbjct: 15  ETIPMSQSSPYSPKTLKHPRSLPRS-------LHYLFREQRLLFILVGILIGSTFFILQP 74

Query: 65  FTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGKVPPGLTKRNLRI 124
                   +       S     +  P  R  + +   G  GR    G+VP G+ ++ LRI
Sbjct: 75  SLSRLGAAESTSLITRSVSYAVTDSPPSRSTFNSGGGG--GR---TGRVPVGIGRKRLRI 134

Query: 125 VVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILL 184
           VVTGGAGFVGSHLVD+LI RGD VIV+DNFFTGRK+NLVH F NPRFELIRHDVV+PILL
Sbjct: 135 VVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPILL 194

Query: 185 EVDQIYHLACPASP 197
           EVDQIYHLACPASP
Sbjct: 195 EVDQIYHLACPASP 196

The following BLAST results are available for this feature:

BLAST of Chy11G200980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZI2	1.8e-48	54.50	UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1...	[more]
Q8S8T4	7.7e-47	54.46	UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2...	[more]
Q8VZC0	9.8e-42	52.58	UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1...	[more]
Q9SN95	1.2e-26	69.62	UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2...	[more]
Q9ZV36	2.6e-26	69.62	UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2...	[more]

BLAST of Chy11G200980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF37	1.2e-103	97.45	UDP-glucuronate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_6G319800 PE=3 SV...	[more]
A0A1S3C7Y3	5.3e-99	93.40	UDP-glucuronate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103497844 PE=3 SV=1	[more]
A0A6J1H7L0	2.4e-83	81.59	UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111460303 PE=3...	[more]
A0A6J1L4B9	5.3e-83	80.60	UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111499022 PE=3 S...	[more]
A0A6J1CA79	5.7e-77	81.15	UDP-glucuronate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111009636 PE=...	[more]

BLAST of Chy11G200980 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47434.1	3.93e-132	97.45	hypothetical protein Csa_021708 [Cucumis sativus]	[more]
XP_031743802.1	4.36e-129	97.45	LOW QUALITY PROTEIN: UDP-glucuronic acid decarboxylase 2 [Cucumis sativus]	[more]
XP_008458422.1	5.37e-123	93.40	PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Cucumis melo]	[more]
XP_038875623.1	3.66e-107	84.58	UDP-glucuronic acid decarboxylase 2-like [Benincasa hispida]	[more]
KAG6575072.1	1.41e-102	82.59	UDP-glucuronic acid decarboxylase 4, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Chy11G200980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62830.1	1.3e-49	54.50	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G62830.2	1.3e-49	54.50	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47650.1	5.5e-48	54.46	UDP-xylose synthase 4	[more]
AT2G47650.2	5.5e-48	54.46	UDP-xylose synthase 4	[more]
AT3G53520.1	7.0e-43	52.58	UDP-glucuronic acid decarboxylase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 124..198 e-value: 6.6E-11 score: 42.2
None	No IPR available	GENE3D	3.40.50.720		coord: 116..216 e-value: 1.0E-33 score: 119.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR43078:SF34	UDP-GLUCURONIC ACID DECARBOXYLASE 2	coord: 6..197
IPR044516	UDP-glucuronic acid decarboxylase	PANTHER	PTHR43078	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	coord: 6..197
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 118..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G200980.1	Chy11G200980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0033320	UDP-D-xylose biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0070403	NAD+ binding
molecular_function	GO:0048040	UDP-glucuronate decarboxylase activity