Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCGAGAAGTTCATGTCAGATTGATTTGATTCGAATACTTCTTGGTCCTGCCCACATCTATGGAATGCTCTATTGCACTATTGATGGAAGTGTGATCTATGGAGAGATAACCCCAACATTTTCAAGTGAGTTAAAATTTGTTTAACACAATTTAGTTTTCATGTTACATAGCATTATCGCTTGAGCGTGTCCTTCTATTGGTTTGTTTTTCAATCAACCGTTTTCTTTTCTCATCGCTGATTATGACTATAAAAGAAATCGTGTTACGACTCAAACCATTTTATAATAGATTAGTTTTACTTTTCAATTTTTCGTTGATTTTTTTTAGAATTAGACCATTCAACATCAACACGACGACTATAATTAAATCAACTATTTTGAATTCATGCCAAACAAAGACAAATACGAAATAATTTTAAAATTGTTAAAATCACTATATGGATAAATTTTTCAATATCAAATGTTGGTGTCATTGTGTGTGTATATAATATATGACATGCATGTTGAAGATGCCGCGGTGCAAATGCAATGCGGAGCTGGAATGGTAGTTACGTCGGTTAAGACCGACGCCACCGGTAATTTCTCCATTTTTCTCGATGCTCCTCGATTGATGCTCCTTTATGTACTCACCAATTGCACTCTCGTTGTCACTACGCCGCTTGTCGACTGCAACGCTGCCCTGCCATCGTTCGGTGCCCTCGTCTCGCCGCTGCAGCTCATTGGAAATACCTTCCATGGACTCTTCAATGTCACCAATTTCATTCCGGTAGGGTTCCGATTCGTTAATAGCATTTGA
mRNA sequence
ATGACATCGAGAAGTTCATGTCAGATTGATTTGATTCGAATACTTCTTGGTCCTGCCCACATCTATGGAATGCTCTATTGCACTATTGATGGAAGTGTGATCTATGGAGAGATAACCCCAACATTTTCAAATGCCGCGGTGCAAATGCAATGCGGAGCTGGAATGGTAGTTACGTCGGTTAAGACCGACGCCACCGGTAATTTCTCCATTTTTCTCGATGCTCCTCGATTGATGCTCCTTTATGTACTCACCAATTGCACTCTCGTTGTCACTACGCCGCTTGTCGACTGCAACGCTGCCCTGCCATCGTTCGGTGCCCTCGTCTCGCCGCTGCAGCTCATTGGAAATACCTTCCATGGACTCTTCAATGTCACCAATTTCATTCCGGTAGGGTTCCGATTCGTTAATAGCATTTGA
Coding sequence (CDS)
ATGACATCGAGAAGTTCATGTCAGATTGATTTGATTCGAATACTTCTTGGTCCTGCCCACATCTATGGAATGCTCTATTGCACTATTGATGGAAGTGTGATCTATGGAGAGATAACCCCAACATTTTCAAATGCCGCGGTGCAAATGCAATGCGGAGCTGGAATGGTAGTTACGTCGGTTAAGACCGACGCCACCGGTAATTTCTCCATTTTTCTCGATGCTCCTCGATTGATGCTCCTTTATGTACTCACCAATTGCACTCTCGTTGTCACTACGCCGCTTGTCGACTGCAACGCTGCCCTGCCATCGTTCGGTGCCCTCGTCTCGCCGCTGCAGCTCATTGGAAATACCTTCCATGGACTCTTCAATGTCACCAATTTCATTCCGGTAGGGTTCCGATTCGTTAATAGCATTTGA
Protein sequence
MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSVKTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHGLFNVTNFIPVGFRFVNSI*
Homology
BLAST of Chy11G200960 vs. ExPASy Swiss-Prot
Match:
Q56S59 (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 3.1e-13
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0
Query: 20 HIYGMLYCTIDGS--VIYGEITPTFSNAAVQMQCGAGMVVTSVKTDATGNFSIFLDAPRL 79
HI G+++C+++G+ VI G F NA+VQ++CGA V++S T+ +G FS+ ++
Sbjct: 33 HISGLVFCSVNGNLDVINGLSPQVFPNASVQLRCGATNVISSTITNGSGAFSLAVNT--- 92
Query: 80 MLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTF---HGLFNVTNFIPVGF 133
+ L NC LVV TPL CNA L S G L S L+L+ T GL V P GF
Sbjct: 93 ---FPLLNCNLVVATPLSTCNATLQSVGRLASSLRLVNITLGSGTGLIRV-GLAPTGF 143
BLAST of Chy11G200960 vs. ExPASy TrEMBL
Match:
A0A1S3C7U3 (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103497845 PE=4 SV=1)
HSP 1 Score: 235.3 bits (599), Expect = 1.5e-58
Identity = 115/138 (83.33%), Postives = 124/138 (89.86%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
MTS SSCQ+DLIR LLGP I+GMLYC IDGSVIYG++ PTF NA VQMQCGAG VV+SV
Sbjct: 16 MTSTSSCQLDLIRRLLGPTQIHGMLYCAIDGSVIYGQMIPTFPNAEVQMQCGAGTVVSSV 75
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTDATGNFSI +DAPRLML ++LTNCTLVVTTPL DCNA LPSFG LVSPLQLIGNTFHG
Sbjct: 76 KTDATGNFSILIDAPRLMLPFLLTNCTLVVTTPLFDCNAELPSFGVLVSPLQLIGNTFHG 135
Query: 121 LFNVTNFIPVGFRFVNSI 139
LFNVTNFIPVGFRFVN+I
Sbjct: 136 LFNVTNFIPVGFRFVNNI 153
BLAST of Chy11G200960 vs. ExPASy TrEMBL
Match:
A0A6J1KIA9 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111494688 PE=4 SV=1)
HSP 1 Score: 194.5 bits (493), Expect = 2.9e-46
Identity = 96/136 (70.59%), Postives = 114/136 (83.82%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCG-AGMVVTS 60
M + SSCQ DLIR LLG HI G LYCT++G++IYG +TPTF NAAV+M CG AG V++S
Sbjct: 17 MATLSSCQFDLIRTLLGLTHIQGTLYCTLNGNMIYGLLTPTFPNAAVEMHCGAAGTVISS 76
Query: 61 VKTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFH 120
VK+DATG FS+ LDAP+L+L ++L NC+LVVTTPLV+CN ALPSFGAL SPLQLI NTF
Sbjct: 77 VKSDATGRFSMLLDAPQLLLSFLLNNCSLVVTTPLVNCNGALPSFGALASPLQLIRNTFL 136
Query: 121 GLFNVTNFIPVGFRFV 136
GLFNVTN IPVGFRF+
Sbjct: 137 GLFNVTNIIPVGFRFL 152
BLAST of Chy11G200960 vs. ExPASy TrEMBL
Match:
A0A6J1EPU9 (uncharacterized protein LOC111436755 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436755 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 90/127 (70.87%), Postives = 109/127 (85.83%), Query Frame = 0
Query: 10 DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGA-GMVVTSVKTDATGNF 69
DLIR LLG HI G LYCT++G++IYG +TPTF NAAV+M CGA G V++SVK+DATG F
Sbjct: 110 DLIRTLLGLTHIQGTLYCTLNGNMIYGLLTPTFPNAAVEMHCGAGGTVISSVKSDATGRF 169
Query: 70 SIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHGLFNVTNFI 129
S+ LDAP+L+L ++L NC+LVVTTPLV+CN A+PSFGAL SPLQLIGNTF GLFN+TN I
Sbjct: 170 SMLLDAPQLLLSFLLNNCSLVVTTPLVNCNGAMPSFGALASPLQLIGNTFLGLFNITNII 229
Query: 130 PVGFRFV 136
PVGFRF+
Sbjct: 230 PVGFRFL 236
BLAST of Chy11G200960 vs. ExPASy TrEMBL
Match:
A0A6J1EUI5 (phylloplanin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436755 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 90/127 (70.87%), Postives = 109/127 (85.83%), Query Frame = 0
Query: 10 DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGA-GMVVTSVKTDATGNF 69
DLIR LLG HI G LYCT++G++IYG +TPTF NAAV+M CGA G V++SVK+DATG F
Sbjct: 93 DLIRTLLGLTHIQGTLYCTLNGNMIYGLLTPTFPNAAVEMHCGAGGTVISSVKSDATGRF 152
Query: 70 SIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHGLFNVTNFI 129
S+ LDAP+L+L ++L NC+LVVTTPLV+CN A+PSFGAL SPLQLIGNTF GLFN+TN I
Sbjct: 153 SMLLDAPQLLLSFLLNNCSLVVTTPLVNCNGAMPSFGALASPLQLIGNTFLGLFNITNII 212
Query: 130 PVGFRFV 136
PVGFRF+
Sbjct: 213 PVGFRFL 219
BLAST of Chy11G200960 vs. ExPASy TrEMBL
Match:
A0A6J1CAI6 (phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009877 PE=4 SV=1)
HSP 1 Score: 184.5 bits (467), Expect = 3.0e-43
Identity = 88/135 (65.19%), Postives = 109/135 (80.74%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
M S S Q+DLIR LLG H+ G LYCT++G+ I G +TPTF NA V+MQCG+G V++SV
Sbjct: 17 MASVSLSQLDLIRSLLGLTHVQGTLYCTLNGNFISGLLTPTFPNAGVEMQCGSGTVISSV 76
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTD +G FS+ LDAP L+L ++L NC+LVVTTPL DC+AALPSFG L+SPLQ IGNTF G
Sbjct: 77 KTDTSGRFSMLLDAPLLLLSFLLDNCSLVVTTPLADCDAALPSFGGLISPLQRIGNTFLG 136
Query: 121 LFNVTNFIPVGFRFV 136
LFNVTN +P+GFRF+
Sbjct: 137 LFNVTNIVPLGFRFL 151
BLAST of Chy11G200960 vs. NCBI nr
Match:
XP_031745340.1 (phylloplanin-like [Cucumis sativus])
HSP 1 Score: 265 bits (676), Expect = 9.44e-89
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
MTS SSCQ+DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTF NAAVQMQCGAG VVTSV
Sbjct: 15 MTSTSSCQLDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFPNAAVQMQCGAGTVVTSV 74
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFG LVSPLQLIGNTFHG
Sbjct: 75 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGTLVSPLQLIGNTFHG 134
Query: 121 LFNVTNFIPVGFRFVNSI 138
LFNVTNFIPVGFRFV+SI
Sbjct: 135 LFNVTNFIPVGFRFVHSI 152
BLAST of Chy11G200960 vs. NCBI nr
Match:
XP_031745466.1 (phylloplanin-like [Cucumis sativus])
HSP 1 Score: 263 bits (672), Expect = 3.85e-88
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
MTS SSCQ+DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTF NAAVQMQCG G VVTSV
Sbjct: 15 MTSTSSCQLDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFPNAAVQMQCGVGTVVTSV 74
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFG LVSPLQLIGNTFHG
Sbjct: 75 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGTLVSPLQLIGNTFHG 134
Query: 121 LFNVTNFIPVGFRFVNSI 138
LFNVTNFIPVGFRFV+SI
Sbjct: 135 LFNVTNFIPVGFRFVHSI 152
BLAST of Chy11G200960 vs. NCBI nr
Match:
XP_031743891.1 (phylloplanin-like [Cucumis sativus])
HSP 1 Score: 261 bits (668), Expect = 1.57e-87
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
MTS SSCQ+DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTF NAAVQMQCGA VVTSV
Sbjct: 15 MTSTSSCQLDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFPNAAVQMQCGAETVVTSV 74
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFG LVSPLQLIGNTFHG
Sbjct: 75 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGTLVSPLQLIGNTFHG 134
Query: 121 LFNVTNFIPVGFRFVNSI 138
LFNVTNFIPVGFRFV+SI
Sbjct: 135 LFNVTNFIPVGFRFVHSI 152
BLAST of Chy11G200960 vs. NCBI nr
Match:
XP_031742690.1 (phylloplanin-like [Cucumis sativus])
HSP 1 Score: 256 bits (654), Expect = 2.14e-85
Identity = 129/138 (93.48%), Postives = 131/138 (94.93%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
MTS SSCQ+DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTF NAAVQMQC A VVTSV
Sbjct: 15 MTSTSSCQLDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFPNAAVQMQCRAETVVTSV 74
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSF LVSPLQLIGNTFHG
Sbjct: 75 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFSTLVSPLQLIGNTFHG 134
Query: 121 LFNVTNFIPVGFRFVNSI 138
LFNVTNFIPVGFRFV+SI
Sbjct: 135 LFNVTNFIPVGFRFVHSI 152
BLAST of Chy11G200960 vs. NCBI nr
Match:
KAE8637375.1 (hypothetical protein CSA_004468 [Cucumis sativus])
HSP 1 Score: 249 bits (636), Expect = 1.46e-81
Identity = 124/130 (95.38%), Postives = 125/130 (96.15%), Query Frame = 0
Query: 1 MTSRSSCQIDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCGAGMVVTSV 60
MTS SSCQ+DLIRILLGPAHIYGMLYCTIDGSVIYGEITPTF NAAVQMQCG G VVTSV
Sbjct: 1 MTSTSSCQLDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFPNAAVQMQCGVGTVVTSV 60
Query: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHG 120
KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFG LVSPLQLIGNTFHG
Sbjct: 61 KTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGTLVSPLQLIGNTFHG 120
Query: 121 LFNVTNFIPV 130
LFNVTNFIPV
Sbjct: 121 LFNVTNFIPV 130
BLAST of Chy11G200960 vs. TAIR 10
Match:
AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22
Identity = 55/127 (43.31%), Postives = 85/127 (66.93%), Query Frame = 0
Query: 11 LIRILLGPAHIYGMLYCTIDGSVIYGEITPTFSNAAVQMQCG-AGMVVTSVKTDATGNFS 70
L+ +L +I G+++C+++G+ G TP F+NA V++QCG VV++ T+A G FS
Sbjct: 55 LVGGILNLVNINGVVFCSLNGAP-SGTSTPAFANAGVELQCGRQNRVVSTATTNAAGLFS 114
Query: 71 IFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHGLFNVTNFIP 130
+ D+ +++L +L++C +VVTTPL CNA LPS G LVS L +IGN+ GL N+ + IP
Sbjct: 115 LPTDSIQMLLSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISIIP 174
Query: 131 VGFRFVN 137
GF +N
Sbjct: 175 AGFGLLN 180
BLAST of Chy11G200960 vs. TAIR 10
Match:
AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 88.6 bits (218), Expect = 4.3e-18
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 0
Query: 21 IYGMLYCTIDGSVIYGEITPTFSNAAVQMQCG-AGMVVTSVKTDATGNFSIFLDAPRLML 80
I G+L+CTI+G+ + G P F+NA VQ+QCG VV T+ G F+ + ++ L
Sbjct: 38 INGVLFCTINGAPLNGTPAPAFANAVVQLQCGNLNRVVAETITNIAGLFTFSTNGIQISL 97
Query: 81 LYVLTNCTLVVTTPLVDCNAALPSFGALVSPLQLIGNTFHGLFNVTNFIPVGF 133
+L +C +VV TP C+A LPS G L+S L L+G+ GL N+ +P GF
Sbjct: 98 PTLLNDCRIVVPTPRSSCDATLPSTGQLISQLNLVGSIVSGLLNIVAILPTGF 150
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q56S59 | 3.1e-13 | 40.68 | Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C7U3 | 1.5e-58 | 83.33 | phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103497845 PE=4 SV=1 | [more] |
A0A6J1KIA9 | 2.9e-46 | 70.59 | phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111494688 PE=4 SV=1 | [more] |
A0A6J1EPU9 | 1.0e-43 | 70.87 | uncharacterized protein LOC111436755 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1EUI5 | 1.0e-43 | 70.87 | phylloplanin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436755 PE=4 ... | [more] |
A0A6J1CAI6 | 3.0e-43 | 65.19 | phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009877 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G16660.1 | 3.8e-22 | 43.31 | Pollen Ole e 1 allergen and extensin family protein | [more] |
AT3G16670.1 | 4.3e-18 | 40.71 | Pollen Ole e 1 allergen and extensin family protein | [more] |