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Chy11G199600 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTGTTCAAATTCCTCTTAATTTTACTGTAAATCTCACCTAGAAAAATGTGTTTTGAATCCATCAACTACTTACTATACTATAATTGAAGATTAAAATTTAGTAGCATTTGAAATATAACAAGATTTAAGCTCAAAAGAGTCGTGAGGAGCGAAGTTCAAAACTCTATTTCCTCCATAGACTTTCAAAGAGTCTATGCACCCCATAATTAGAAAATATCAATCTTCTGAGTTAATCTTTACATGGTGCTTTAGAAATTCACAACATCCCAAAATTCACTACTTCATTCTTTGATGAACTTTTGTATAAGTACTAAATTTGTATTCATGTAATTCAAATTTGTAATTGGTAGATGATAATATAATTAAGTTTATCTTCATCTATCATCTTAAGTCTTTTGATAAATCGATGATTTATGAAAGTATTCAAGCATGATCGGTAGTATAGAAACTAAATTATTATCGAGAAAGTTTGAGATTTGTTATAAATGTTAGTATATGATTTGAAGGTTCAGCGAGATAAACACGTTGATAAGAATAGTTGGCCAATATTTCAAATTCAATGGTTAAGGTCTTTTTCTCTTTGGGGAAACTTTCCAAATAGTAAGTAAATAATTAAAATACTCAATTCATTTTACTTTTTTTTATTGTGTTTATTTCATAATTGTCAATTGTTGGTAGTCTTCATCCCATTAATCATTAGTCTTTTTTTTTATAAAGAAACAAAACAAAACAAAAATATAGTCATGTTTTAGTCCATTTTTTTAATTAATTATTTTAATAAAGATACGAGAATTTTAGCATCGACCTTGCATATGATAAGATAATACGTGTCAATTGTTATAGATGAATGAAATAACGACGATATTTCAAATTTACAAATATATCGACAAATAAATTTTATTTATATTAATAATTTGGTTGAATTTAGTTTCAAATTATGTTATTAATGCATTTCTCTGTTCATTGAAATGTCTTTTTTGTTTTAAATATTGTATAAGTATTTAAATATAGAAGATCATATCAGACTATTAATCATGTTGAATCTTTCGACTTACTGATATGTTGACGTATTGACAAAAATTTTAATTTTTTTATTACTATTAAAATACACTAACTTGGACGATCTATTATTAAATCCTAGTATGATCATTTAAGTTTTCAGCCTAACATTAATTTGACACGGTAATAAATAGAATAAAAATACGTAAAATACGTTTAAAAGGACTTTCGTTAATAGCAAGGCATCTAAAAGTAGAAACAAAACGTGGAAAAAAATGTATGGGAGGAGAAGAGTTGTAAGATATGCACAATAACATTTCACTGTTTATTTCTTGATTTTAACTTAGTATAATCACATGCTACCCATTTTGAGACTCAATTCCATGGCCTTTTTTGCATCTCTTTTTGGCTGTCTATCTATATATTCAATCTTCAAATGCATGAACTTATCATTTTTATTCATTTATTCAACCTTTAATTTTGTATATGATTTAAAAAATAAATAAAGTAAATAGTGAATATGTTAGGAAAAAAAAACAAGCAGTGTGCATTAAAAATTGAAAGGGAAAGTTAATATGAAGCTTTGGTTCAACAATAGTATTTCTTTGTGGGGAGGAGGTTTTGCAATAGTGTAATTTAGATGTTTAGAATTTTATATTAATTTGGATGTTAGCTTCATGAATGAACACAATTCGTTGCAAAGTTCAATATGGTTAAGTAACTTCGAGGCCAAAAGTTTCTAACCTCATCACATGTAGTACTAAAAATAGAAATATAAATGTTATGGAATGATAGCATACCATATAATATTTAAATAATTATAATTTTCAAAATGGTTTGAATGATAAAAACTTTTAAAAATATTTATAAATATATCAAATTATTACAATCTATCTATGACATATCATAATAGGCGAAGATATATCACTATATCTATGTCTATCATGATATAGATAACATAGATAGTTGTTTATCACAATCAATCGTAGATAGATCGTGCTATTTTATTATATTATTGTAAATAGCTCTATTTTGGTTTAATTTTGAATGTTTTAAAATAGCTATTCATATATTTTTTTCAAAAAAAAAAAAACCTTCAACACTCATTGACATGTCACTAGAACGTCCCACCTAAAAGAAATAGATTTCTATCGACAAATTATTCTAAACTCGCTAAAGAACCTGATAAATTTTGTGTATCAAAATAGCCTTAAAATGATAGCATTCATGTATTTGATATACTATTTATTAAATCTTCTCTTTCAAATTAAACATGATGTAGCTCAATTGATATCTTTATATACCTGAAACAAGAAGTCTCACATTCAAATTTTTCACCCTCAAGTTGTTGTACTAAAAAAACTATAAAATTATGATAAACAACTATCTTAGCAAGCAAATGAACAAAATTTTACAATGGCAATGGATAGACTTAACCAAAGTTCCGAATTTTCAAAAGCTCCTATTTGAAATTGATTAGGGCAATAATGATATGATTTTGCTTTAAAACAAGAAACACAACATTCCTATATTTCTAACTTTGTTTTACTCATAAAACCCGCCTTTCTTTAAAAGTTCTTAATACTCTTATCTCTTAAATCACTTTTTAACTTGATTTAATTTTCTAGTTTGTACATTCAACCTCATGATCCTAACATATTTGATATCATTTTAAATCGTTTATGGATCTAAAAGTTTAAGCTCATAAATAAAAATATATTAAATTATATATCATCTAATACTACATAATTTTGTATTTTTGTAAATGTCATGTCATTGTATTATGCATTTTATTATACAAACTAGATGAACTTATTATGAAAAGTTTCTTTTTGGTAATACATATACCTTTTAGTCCATATATTGAGTTTTAGCTTATATGGAAACCTCGATTTTAAAATTTAATGCCTACAATCATAAGTTGATGAGTTTAGTATCAATTTAGTTCATAAGTTTAAAATAATTTTACATTGATATATAAATATAACAAAATATCATAATTTATCTATGATAAGCTAAAGTAGAGTATTATTTGTATTTATCTATATCTCAATCTATCGTATTTATAAATATTTTAGTTTATTTTTATATATTTGAAAAATATACATTAAAAAAAAAAAACTAAAATTTTACAAATATGAAAAGTAAATAAATAAAAAAAATGTGCATTCACATCCACACCGTCACATGATTCCCCGTTGGTTAGTCAAAAACAGCCCTAATATCCATTGAATTTCAATCAAATCTAGAAATGACCATACTACCCTTGCCCACTTTTGGTTCTCTACTTTCTCAAATGTGTACACAAAGAAACTTTAATTTCAATTTGAATTGAAATCATCATCACATGCCCTCATTTCCCTATATATAAACTCACTAATGGGGTTCTCTCTTTTTCCATCTTTTGGATTCCCTCTTCAACAACTCTCCAAATCCAAACCCATTACTTTTAATCATTTGCCTTGCCTTCTTTTCTTCTTTTAGTATTGAAGAACACAATTATTGTGTATTAAGGATGGGAGTCGGTTCATCACCCTGTGCCTCTTGTAAATTGCTACGACGACGGTGTGCAAAAGACTGCATTTTTGCTCCTTATTTCCCTCCTGACGACCCTCTCAAGTTCGCCATTGTTCATAAGATCTTTGGTGCTAGCAATGTCAGCAAAATGTTGCAGGTCTCTTCTTCTTCAATCTTGTCGATCTCTTTTTTTACTTTAATTTGGTAGTTTGGATTACATATTCGAGCATTCCAACGTCTTAGTCATTCTAGACGTACAATGACTCGTTGGTGTTTATGATATAGTTTTGGTTTCAAGCTTTTAGGTCAATCAAATTTAAGATGGTAATAGAATAGTTACCTTGATCATTGTGTTCAAACTCAATTCGTTATTTAAGAGCTTTTGAATGGTAGTAGAGCTATAACAGTTGTATTAAATAATTTTTTTTTTCAAATATTTTTAGTTTATTTGAAAAAAAAATTGAATGTGATTTTTATATTTATTAGGAGGTTCCAGTAGATCAAAGGGCAGATGCAGTGAGTAGTATGGTATATGAAGCTAGTGCAAGAATGCAAGATCCAGTGTATGGTTGTGTAGGAACAATTTTGTTTTTGCAAAACGAAGTGTCTCAATTAGAAATTCAACTAGGGGCAGCTCGGGCGGAGATTTTGATGTTACAAATGCGACAACAACAAGAAGCTTCAATAACATTTCCGATGACGACAACCCAAATGGATCAAGATGAACAGAATCTTATGATTCTCTCAAATGCCGATTCTTCTAATTCCTTCCATGTTTTTCAAGCATTAGAGGATCATTACCCTTTATGA ATGAAGGAGGTTCCAGTAGATCAAAGGGCAGATGCAGTGAGTAGTATGGTATATGAAGCTAGTGCAAGAATGCAAGATCCAGTGTATGGTTGTGTAGGAACAATTTTGTTTTTGCAAAACGAAGTGTCTCAATTAGAAATTCAACTAGGGGCAGCTCGGGCGGAGATTTTGATGTTACAAATGCGACAACAACAAGAAGCTTCAATAACATTTCCGATGACGACAACCCAAATGGATCAAGATGAACAGAATCTTATGATTCTCTCAAATGCCGATTCTTCTAATTCCTTCCATGTTTTTCAAGCATTAGAGGATCATTACCCTTTATGA ATGAAGGAGGTTCCAGTAGATCAAAGGGCAGATGCAGTGAGTAGTATGGTATATGAAGCTAGTGCAAGAATGCAAGATCCAGTGTATGGTTGTGTAGGAACAATTTTGTTTTTGCAAAACGAAGTGTCTCAATTAGAAATTCAACTAGGGGCAGCTCGGGCGGAGATTTTGATGTTACAAATGCGACAACAACAAGAAGCTTCAATAACATTTCCGATGACGACAACCCAAATGGATCAAGATGAACAGAATCTTATGATTCTCTCAAATGCCGATTCTTCTAATTCCTTCCATGTTTTTCAAGCATTAGAGGATCATTACCCTTTATGA MKEVPVDQRADAVSSMVYEASARMQDPVYGCVGTILFLQNEVSQLEIQLGAARAEILMLQMRQQQEASITFPMTTTQMDQDEQNLMILSNADSSNSFHVFQALEDHYPL* Homology
BLAST of Chy11G199600 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 91.3 bits (225), Expect = 7.5e-18 Identity = 49/104 (47.12%), Postives = 78/104 (75.00%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13 Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13 Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.4e-13 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 5.2e-11 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy TrEMBL
Match: A0A0A0KBK5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48 Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy TrEMBL
Match: A0A1S3CKM4 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 7.2e-40 Identity = 90/107 (84.11%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy TrEMBL
Match: A0A6J1L5Y7 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111499469 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy TrEMBL
Match: A0A6J1G7F7 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451558 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.8e-25 Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Chy11G199600 vs. ExPASy TrEMBL
Match: A0A4D6KQ89 (Carbamoyl-phosphate synthase large subunit OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1465 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19 Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Chy11G199600 vs. NCBI nr
Match: XP_004143222.1 (LOB domain-containing protein 12 [Cucumis sativus] >KGN47050.1 hypothetical protein Csa_021050 [Cucumis sativus]) HSP 1 Score: 204 bits (518), Expect = 4.84e-65 Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Chy11G199600 vs. NCBI nr
Match: XP_008463841.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]) HSP 1 Score: 175 bits (444), Expect = 8.69e-54 Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Chy11G199600 vs. NCBI nr
Match: XP_038902597.1 (LOB domain-containing protein 12 [Benincasa hispida]) HSP 1 Score: 157 bits (398), Expect = 7.88e-47 Identity = 83/109 (76.15%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of Chy11G199600 vs. NCBI nr
Match: XP_023006803.1 (LOB domain-containing protein 12-like [Cucurbita maxima]) HSP 1 Score: 127 bits (320), Expect = 5.73e-35 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Chy11G199600 vs. NCBI nr
Match: KAG6605396.1 (LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035343.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125 bits (315), Expect = 3.28e-34 Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Chy11G199600 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 91.3 bits (225), Expect = 5.3e-19 Identity = 49/104 (47.12%), Postives = 78/104 (75.00%), Query Frame = 0
BLAST of Chy11G199600 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 ) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14 Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Chy11G199600 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14 Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Chy11G199600 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 ) HSP 1 Score: 74.3 bits (181), Expect = 6.7e-14 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Chy11G199600 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 68.6 bits (166), Expect = 3.7e-12 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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