Chy11G198690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G198690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 19069970 .. 19070711 (-)
RNA-Seq Expression	Chy11G198690
Synteny	Chy11G198690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAGAGAGCTATCCGTACAACAACCGACCACCATTGCACCATAATGATCTCCACTCTATCACAATATCACCCTCAAGGAATTAGATCATCAATGCACGATTTCACTGCCGCTGGTGATCTTCTTCCAGTTTCTGATACTCGTTTCTGCATAAGGAAGCGAGATCGCAATTCACGCTACAGATTCCGCGTGCATTGGATTCATTTGATTCCTTTGATTCTGCTCCTCATCCTCTTTATTCTCTGGTGGTCATCTTATCCAGGTAAATTTCCTCAATAATATATTATTATTCTGTTTATCTTAGGTACATTCACGTAATTTTCTTCAATCGATTAATCTCATCCGTTGACAATTCGTTTCTGGTTCTTCTTGCATGTATAATTTAGTAGTTTCTTTCACTTTCCGATATATATTCTGATTTTATCAAGAATTTTCAAGCACTTACTCGTTTTCTTGATTTCATCTTGTTCTTTCTTGCCTCCTCTGTTGTTGTAATGTCTAAATTGATTTACTAATACTTGTGCTCTTTTTCTCATGCGAACACATGAATTTAGCGATCAGGGATGGAGGAATTAGCGCAGTTGATGAGAAGGATCGGTTTCCGGAGGTGCCGAAGTACGTTGATCATACTGAACTTGCCGTTTTAGGAGATGCTGGAACGCATATTGCTTCGAGTTCTCTGAATCTATCCAGCGTTGGCGATCGAGATTCACGGATAATGCCGAGTAAAATCGATTGA

mRNA sequence

ATGCAGCAGAGAGCTATCCGTACAACAACCGACCACCATTGCACCATAATGATCTCCACTCTATCACAATATCACCCTCAAGGAATTAGATCATCAATGCACGATTTCACTGCCGCTGGTGATCTTCTTCCAGTTTCTGATACTCGTTTCTGCATAAGGAAGCGAGATCGCAATTCACGCTACAGATTCCGCGTGCATTGGATTCATTTGATTCCTTTGATTCTGCTCCTCATCCTCTTTATTCTCTGGTGGTCATCTTATCCAGCGATCAGGGATGGAGGAATTAGCGCAGTTGATGAGAAGGATCGGTTTCCGGAGGTGCCGAAGTACGTTGATCATACTGAACTTGCCGTTTTAGGAGATGCTGGAACGCATATTGCTTCGAGTTCTCTGAATCTATCCAGCGTTGGCGATCGAGATTCACGGATAATGCCGAGTAAAATCGATTGA

Coding sequence (CDS)

ATGCAGCAGAGAGCTATCCGTACAACAACCGACCACCATTGCACCATAATGATCTCCACTCTATCACAATATCACCCTCAAGGAATTAGATCATCAATGCACGATTTCACTGCCGCTGGTGATCTTCTTCCAGTTTCTGATACTCGTTTCTGCATAAGGAAGCGAGATCGCAATTCACGCTACAGATTCCGCGTGCATTGGATTCATTTGATTCCTTTGATTCTGCTCCTCATCCTCTTTATTCTCTGGTGGTCATCTTATCCAGCGATCAGGGATGGAGGAATTAGCGCAGTTGATGAGAAGGATCGGTTTCCGGAGGTGCCGAAGTACGTTGATCATACTGAACTTGCCGTTTTAGGAGATGCTGGAACGCATATTGCTTCGAGTTCTCTGAATCTATCCAGCGTTGGCGATCGAGATTCACGGATAATGCCGAGTAAAATCGATTGA

Protein sequence

MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMHDFTAAGDLLPVSDTRFCIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVLGDAGTHIASSSLNLSSVGDRDSRIMPSKID*

Homology

[Close]

BLAST of Chy11G198690 vs. ExPASy TrEMBL
Match: A0A0A0KHS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301010 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67
Identity = 133/149 (89.26%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMHDFTAAGDLLPVSDTRFCIRKRDRNSR 60
           MQQRAIRTTTD  CTIM STLSQ  PQGIR SM DFTAAGDLLPVSD RF IRKRDRNSR
Sbjct: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR 60

Query: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVLG 120
           YRFRVHWIHLIPLILLLILFILWWSSYPAI+DGGI AVDEKDRFPEVPKYVDHTELAVLG
Sbjct: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG 120

Query: 121 DAGTHIASSSLNLSSVGDRDSRIMPSKID 150
           DAG  IASS LNL+SVGDRDSRI+PSKID
Sbjct: 121 DAGMDIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of Chy11G198690 vs. ExPASy TrEMBL
Match: A0A5D3CTN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00940 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.0e-62
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMH-DFTAAGDLLPVSDTRFCIRKRDRNS 60
           MQQRA R TTD+HC++MIST S+  PQGIRSSM  DFTAAGDLLP+SD RF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSR-EPQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP I+DGGI A  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGTHIASSSLNLSSVGDRDSRIMPSKID 150
           GDAG HIASS LNL+SVGDRDSRI+PSKID
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of Chy11G198690 vs. ExPASy TrEMBL
Match: A0A1S3CKP4 (uncharacterized protein LOC103501898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501898 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.0e-62
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMH-DFTAAGDLLPVSDTRFCIRKRDRNS 60
           MQQRA R TTD+HC++MIST S+  PQGIRSSM  DFTAAGDLLP+SD RF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSR-EPQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP I+DGGI A  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGTHIASSSLNLSSVGDRDSRIMPSKID 150
           GDAG HIASS LNL+SVGDRDSRI+PSKID
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of Chy11G198690 vs. ExPASy TrEMBL
Match: A0A1S3CK66 (uncharacterized protein LOC103501898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501898 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 120/146 (82.19%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMH-DFTAAGDLLPVSDTRFCIRKRDRNS 60
           MQQRA R TTD+HC++MIST S+  PQGIRSSM  DFTAAGDLLP+SD RF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSR-EPQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP I+DGGI A  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGTHIASSSLNLSSVGDRDSRIMP 146
           GDAG HIASS LNL+SVGDRDSRI+P
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIP 145

[Close]

BLAST of Chy11G198690 vs. ExPASy TrEMBL
Match: A0A6J1JI18 (uncharacterized protein LOC111484535 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484535 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.7e-34
Identity = 91/154 (59.09%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 1   MQQR-----AIRTTTDHHCTIMISTLSQYHPQGIRS----SMHDFTAAGDLLPVSDTRFC 60
           MQQR     + R TTD HC+I+ S   +  PQG  S    SM D  ++G  LPVSD    
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQE--PQGRCSPEIRSMDD--SSGSFLPVSDP--S 60

Query: 61  IRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYP---AIRDGGISAVDEKDRFPEVP 120
            RKRD NSRY+F   WIHLIPLILLL+LFILWWSSYP    I+DGGI AV   + FPE P
Sbjct: 61  CRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASE-FPEAP 120

Query: 121 KYVDHTELAVLGDAGTHIASSSLNLSSVGDRDSR 143
           KY+DH ELA+LGDAG  IASS LNL+SVG RD R
Sbjct: 121 KYIDHVELAILGDAGMQIASSPLNLTSVGARDLR 147

[Close]

BLAST of Chy11G198690 vs. NCBI nr
Match: XP_004148247.1 (uncharacterized protein LOC101221086 [Cucumis sativus] >KGN47331.1 hypothetical protein Csa_022941 [Cucumis sativus])

HSP 1 Score: 261 bits (666), Expect = 4.47e-87
Identity = 133/149 (89.26%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMHDFTAAGDLLPVSDTRFCIRKRDRNSR 60
           MQQRAIRTTTD  CTIM STLSQ  PQGIR SM DFTAAGDLLPVSD RF IRKRDRNSR
Sbjct: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR 60

Query: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVLG 120
           YRFRVHWIHLIPLILLLILFILWWSSYPAI+DGGI AVDEKDRFPEVPKYVDHTELAVLG
Sbjct: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG 120

Query: 121 DAGTHIASSSLNLSSVGDRDSRIMPSKID 149
           DAG  IASS LNL+SVGDRDSRI+PSKID
Sbjct: 121 DAGMDIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of Chy11G198690 vs. NCBI nr
Match: XP_008463866.1 (PREDICTED: uncharacterized protein LOC103501898 isoform X2 [Cucumis melo] >KAA0035282.1 uncharacterized protein E6C27_scaffold228G00740 [Cucumis melo var. makuwa] >TYK14354.1 uncharacterized protein E5676_scaffold84G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (621), Expect = 3.23e-80
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMHD-FTAAGDLLPVSDTRFCIRKRDRNS 60
           MQQRA R TTD+HC++MIST S+  PQGIRSSM D FTAAGDLLP+SD RF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSR-EPQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP I+DGGI A  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGTHIASSSLNLSSVGDRDSRIMPSKID 149
           GDAG HIASS LNL+SVGDRDSRI+PSKID
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of Chy11G198690 vs. NCBI nr
Match: XP_008463865.1 (PREDICTED: uncharacterized protein LOC103501898 isoform X1 [Cucumis melo])

HSP 1 Score: 236 bits (603), Expect = 5.96e-77
Identity = 120/146 (82.19%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MQQRAIRTTTDHHCTIMISTLSQYHPQGIRSSMHD-FTAAGDLLPVSDTRFCIRKRDRNS 60
           MQQRA R TTD+HC++MIST S+  PQGIRSSM D FTAAGDLLP+SD RF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSR-EPQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIRDGGISAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP I+DGGI A  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGTHIASSSLNLSSVGDRDSRIMP 145
           GDAG HIASS LNL+SVGDRDSRI+P
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIP 145

[Close]

BLAST of Chy11G198690 vs. NCBI nr
Match: XP_038902298.1 (uncharacterized protein LOC120088933 [Benincasa hispida])

HSP 1 Score: 177 bits (448), Expect = 1.01e-53
Identity = 101/162 (62.35%), Postives = 115/162 (70.99%), Query Frame = 0


Query: 1   MQQRAI---RTTTDH-HCTIMISTLSQYHPQGIRSS------MHDFTAAGDLLPVSDTRF 60
           MQQRA+   R T DH HC IMI +     P+G RS       + D + AG LLP+SD RF
Sbjct: 1   MQQRALSSFRATNDHDHCNIMIFSTPTQEPRGRRSPPSRSSILMDDSNAG-LLPISDPRF 60

Query: 61  CIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA---IRDGGISAVDEKDRFPEV 120
             +KRD NSRYRF   WIHLIPLILLLILFILWWSSYP    I+DG ISAV   D+FPE 
Sbjct: 61  STKKRDHNSRYRFAERWIHLIPLILLLILFILWWSSYPVNMVIKDGAISAVYTNDQFPEA 120

Query: 121 PKYVDHTELAVLGDAGTHIASSSLNLSSVGDRDSRIMPSKID 149
           PKY+DH ELAVLGDAG  IASS LN++S+GDRD RI PSK+D
Sbjct: 121 PKYIDHVELAVLGDAGMQIASSPLNVTSIGDRDLRI-PSKVD 160

[Close]

BLAST of Chy11G198690 vs. NCBI nr
Match: XP_023512016.1 (uncharacterized protein LOC111776853 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154 bits (390), Expect = 4.94e-45
Identity = 92/154 (59.74%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 1   MQQRA-----IRTTTDHHCTIMISTLSQYHPQGIRS----SMHDFTAAGDLLPVSDTRFC 60
           MQQR+      R TTD HC+I+ S   +  PQG  S    SM D  ++G +LPVSD    
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQE--PQGRCSPETRSMDD--SSGSILPVSDPS-- 60

Query: 61  IRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA---IRDGGISAVDEKDRFPEVP 120
            RKRD NSRY+F   WIHLIPLILLL+LFILWWSSYP    I DGGI AV   + FPE P
Sbjct: 61  CRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVINDGGIKAVYASE-FPEAP 120

Query: 121 KYVDHTELAVLGDAGTHIASSSLNLSSVGDRDSR 142
           KY+DH ELA+LGDAG HIASS LNL+SVG RD R
Sbjct: 121 KYIDHVELAILGDAGMHIASSPLNLTSVGARDLR 147

[Close]

BLAST of Chy11G198690 vs. TAIR 10
Match: AT4G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 27/48 (56.25%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 42 LLPVSDTRFCIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA 90
          LLP  D      KR++ SR+RF  + IHLIPLILLL + ILW SSY A
Sbjct: 37 LLPRYDPNSQAGKREK-SRFRFSENVIHLIPLILLLCVAILWLSSYSA 83

The following BLAST results are available for this feature:

BLAST of Chy11G198690 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G198690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHS9	4.2e-67	89.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301010 PE=4 SV=1	[more]
A0A5D3CTN8	7.0e-62	82.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKP4	7.0e-62	82.67	uncharacterized protein LOC103501898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CK66	1.1e-59	82.19	uncharacterized protein LOC103501898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JI18	4.7e-34	59.09	uncharacterized protein LOC111484535 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Chy11G198690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148247.1	4.47e-87	89.26	uncharacterized protein LOC101221086 [Cucumis sativus] >KGN47331.1 hypothetical ...	[more]
XP_008463866.1	3.23e-80	82.67	PREDICTED: uncharacterized protein LOC103501898 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008463865.1	5.96e-77	82.19	PREDICTED: uncharacterized protein LOC103501898 isoform X1 [Cucumis melo]	[more]
XP_038902298.1	1.01e-53	62.35	uncharacterized protein LOC120088933 [Benincasa hispida]	[more]
XP_023512016.1	4.94e-45	59.74	uncharacterized protein LOC111776853 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy11G198690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16840.1	1.0e-04	56.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34189	TRANSMEMBRANE PROTEIN	coord: 1..147
None	No IPR available	PANTHER	PTHR34189:SF7	SERINE/THREONINE-KINASE RLCKVII PROTEIN	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G198690.1	Chy11G198690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane