Chy11G195170 (gene) Cucumber (hystrix) v1

Overview
NameChy11G195170
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH11: 12995967 .. 12997408 (+)
RNA-Seq ExpressionChy11G195170
SyntenyChy11G195170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGGTCTGGGTCTTAAACTCGAATAAATCGTTAACCATTGTAGATTTCTGCGAGTGTTTGATCATCTATTAACAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGCTTTTGGGTCTTGCATTTATCTCCAATTCAATCTGTCAAAGGTACAGTTTCTAATGAATCTTTAATCACATCAAAATCTGTTAAGAGAGTTCCTAATGTTTATAAGATAGATAGTTATTCCTCCCATTATTAATTGGGTTTGATAAAATCCAATTGATTCTTGTCATAAGGTAAAATTTGAAATTGTAGGAACAATGCGGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGTAAATTTCGCCATTTTCAAGATTCGAGAGCTTTTCTGTGGGGAGGCAGAGATGACCTTGAAAGTAACCATAAAACTCAACATCTATATGATCATTGAACAATTTCAATTGACTAATCATATTAACTTCTGTTGTTGGATGTTTAATGGATTTAAGTATTTCTGGGGTTTTTCAGGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATACCTTATTACTCTTAGAAGACTCTGTGCAATTGGTATAATACAACAGAAAAATCATTTCAGAACTTGCTTAAAAATCTCTCATTGATTTATGATCGCTACTTTAATCTTCATTTACTTTCAGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATTCATGTTACCAGATTCAGATAAACAGCAAAGGTAAATAGGAATTCTAGGAAACACCCACTTAAACATAGCTACTTCTGCATTTTGTATATAAAATGTGATGCTGAAAAAGAAGAAGATGGTGATGGTGATGGTATTTTACAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTAAAGACCCGAATCTTCACAGGTAACAATCATGTTAGATGATCTTAGTTTCTTCAATCTCCATTGTTCTAGCTTAATAAAGATCCTTTATTAAGCTCTGTTAGGTTTTGTTTGTTACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGTAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAAGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTCGAACCCCATTGTTAG

mRNA sequence

ATCTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGCTTTTGGGTCTTGCATTTATCTCCAATTCAATCTGTCAAAGGAACAATGCGGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGTAAATTTCGCCATTTTCAAGATTCGAGAGCTTTTCTGTGGGGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATACCTTATTACTCTTAGAAGACTCTGTGCAATTGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATTCATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTAAAGACCCGAATCTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGTAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAAGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTCGAACCCCATTGTTAG

Coding sequence (CDS)

ATCTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGCTTTTGGGTCTTGCATTTATCTCCAATTCAATCTGTCAAAGGAACAATGCGGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGTAAATTTCGCCATTTTCAAGATTCGAGAGCTTTTCTGTGGGGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATACCTTATTACTCTTAGAAGACTCTGTGCAATTGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATTCATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTAAAGACCCGAATCTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGTAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAAGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTCGAACCCCATTGTTAG

Protein sequence

ILIMMRMVVWIKLGS**LI**CGKMWLSQAFGLDLALCFSSPLASLEELALAFSQQFPSLDFCFWVLHLSPIQSVKGTMRKRNIKTSSLKKMT*NAW*NWFFRL*ISPFSRFESFSVGRQR*P*K*LHFSF*ELNMDTLLLLEDSVQLGSLAVSLCQSCIHVTRFR*TAKWMP*NNGCLKHGKLAHIRRL**DQQPQRFGTFLP*RPESSQLSLF*S*FDTAGNL*CRQNRKL*KYKRMRSRHWLW*KARRRSRSKFKSNPIVX
Homology
[Close]
BLAST of Chy11G195170 vs. NCBI nr
Match: RXH92018.1 (hypothetical protein DVH24_021041 [Malus domestica])

HSP 1 Score: 48.9 bits (115), Expect = 6.42e-04
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 35 LALCFSSPLASLEELALAFSQQFPSLDFCFWVLHLSPIQSVKG 77
          LA+  S PL  L  L    + +FP  DFCFWVLHLSPIQSVKG
Sbjct: 6  LAITPSVPLRPLLNLP---TTRFPKSDFCFWVLHLSPIQSVKG 45

The following BLAST results are available for this feature:
BLAST of Chy11G195170 vs.
Match NameE-valueIdentityDescription
BLAST of Chy11G195170 vs.
Match NameE-valueIdentityDescription
BLAST of Chy11G195170 vs. NCBI nr
Match NameE-valueIdentityDescription
RXH92018.16.42e-0460.47hypothetical protein DVH24_021041 [Malus domestica][more]
BLAST of Chy11G195170 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G195170.1Chy11G195170.1mRNA