Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGGCTGAGACGACAATTTCAACTAACATAGTTGATGATGCTTTCCTGACCGTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTCTTTTGTCTCAACAAGATCATACGTATAAGGTTCTTGAAAAATAATATTTGAAGATGAAGTAGGAAATTATAGAAATGAAAGCAATGAAAGATGAAATGATAGAAATAAAAGCACTTCTGTCATGATATTTAAAGAAACATGTATTTTTTTTCTTTTACTAACTTACATTCTTTTTTTTTTCCTCTGTTAGTTAGTTAACTATTTTTTTTGGTTTCATACTAGATTATCATAGGTTGAACCAAGTGAGAAACTTTCAAAGGTACTGCAAGTGTGCTTAAGCAAAAAAATATTTCTCCAACTTGTCCAATGTCTTCTCCATAGATAAATTTATTTGTAATAAGATGAAAATTGTTTATGATGTCATTATTTTCTTATTCCAGTATCTCATATTTATCTTTTGACAGAGTATCAATAATAACAGTCAAATTAAGTGCAAGTTATTAGATTTGTACGGCTCGTGAGAGATTGTTGCCGAAGGAAGATGGTCTTCTAATGATCCAACTGCTTTGGTTCATTATGTTCCTATTGGTCCACAAGCAGTTAGAGTATGAGTTGATGTAGCAACGAAACCAAACTCACATTTGTGGAGGCCAACATGAGAAATGACATGTATTGAAGAAGCTTTGGAAAGTACACTTGCATGACTATGTGATAAAGTGACCATTGGTATGTTATCTAATAAATTTTTTTATCTACATTTGTTAAAAAATTCTTATACTTGTTTAATTAATATCCATTATCATTCCTGTCTACTAATCATACATTGTTATATGTTCTATAATTTTTTGTAGGTGAATCAAATGGCATCTTAA
mRNA sequence
TGAGGCTGAGACGACAATTTCAACTAACATAGTTGATGATGCTTTCCTGACCGTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTCTTTTGTCTCAACAAGATCATACGTATAAGGTTCTTGAAAAATAATATTTGAAGATGAAGTAGGAAATTATAGAAATGAAAGCAATGAAAGATGAAATGATAGAAATAAAAGCACTTCTGTCATGATATTTAAAGAAACAGAGTATCAATAATAACAGTCAAATTAAGTGCAAGTTATTAGATTTGTACGGCTCGTGAGAGATTGTTGCCGAAGGAAGATGGTCTTCTAATGATCCAACTGCTTTGGTTCATTATGTTCCTATTGGTCCACAAGCAGTTAGAGTATGAGTTGATGTAGCAACGAAACCAAACTCACATTTGTGGAGGCCAACATGAGAAATGACATGTATTGAAGAAGCTTTGGAAAGTACACTTGCATGACTATGTGATAAAGTGAATCAAATGGCATCTTAA
Coding sequence (CDS)
TGAGGCTGAGACGACAATTTCAACTAACATAGTTGATGATGCTTTCCTGACCGTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTCTTTTGTCTCAACAAGATCATACGTATAAGGTTCTTGAAAAATAATATTTGAAGATGAAGTAGGAAATTATAGAAATGAAAGCAATGAAAGATGAAATGATAGAAATAAAAGCACTTCTGTCATGATATTTAAAGAAACAGAGTATCAATAATAACAGTCAAATTAAGTGCAAGTTATTAGATTTGTACGGCTCGTGAGAGATTGTTGCCGAAGGAAGATGGTCTTCTAATGATCCAACTGCTTTGGTTCATTATGTTCCTATTGGTCCACAAGCAGTTAGAGTATGAGTTGATGTAGCAACGAAACCAAACTCACATTTGTGGAGGCCAACATGAGAAATGACATGTATTGAAGAAGCTTTGGAAAGTACACTTGCATGACTATGTGATAAAGTGAATCAAATGGCATCTTAA
Protein sequence
*G*DDNFN*HS**CFPDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKQSINNNSQIKCKLLDLYGS*EIVAEGRWSSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVNQMAS*
Homology
BLAST of Chy11G193550 vs. ExPASy TrEMBL
Match:
A0A5D3D211 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001840 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 8.9e-61
Identity = 124/183 (67.76%), Postives = 137/183 (74.86%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLS QDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 1187 PDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 1246
Query: 76 *YLKKQ---------------------------SINNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ SINNNSQ KCKLLD YGS EIVAEGRW
Sbjct: 1247 SYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINNNSQTKCKLLDWYGSGEIVAEGRW 1306
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVNQ 172
SSNDPTA+VH++PIGP A+RV +DVA KPN++LWRPT EMTCIEEAL ST+A DKVN+
Sbjct: 1307 SSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSDKVNE 1366
BLAST of Chy11G193550 vs. ExPASy TrEMBL
Match:
A0A5A7TAN8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003350 PE=4 SV=1)
HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60
Identity = 125/184 (67.93%), Postives = 137/184 (74.46%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 146 PDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 205
Query: 76 *YLKKQ----------------------------SINNNSQIKCKLLDLYGS*EIVAEGR 135
YLKKQ SINNNSQ KCKLLD YGS EIVAEGR
Sbjct: 206 SYLKKQTEPSEEELSNATASVFKRLNIPPMSSPSSINNNSQTKCKLLDWYGSGEIVAEGR 265
Query: 136 WSSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVN 172
WSSNDPTA+VH++PIGP A+RV VDVA KPN++LWRP EMTCIEEAL ST+A DKVN
Sbjct: 266 WSSNDPTAMVHHIPIGPHAIRVWVDVAKKPNAYLWRPISEMTCIEEALGSTVAWPSDKVN 325
BLAST of Chy11G193550 vs. ExPASy TrEMBL
Match:
A0A5A7TEM3 (Putative TNP2-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G002610 PE=4 SV=1)
HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60
Identity = 124/183 (67.76%), Postives = 137/183 (74.86%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLSQQ H YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 576 PDRGHVRGFGFGVTRSKLSLLSQQYHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 635
Query: 76 *YLKKQ---------------------------SINNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ SINNNSQ KCKLLD YGS EIVAEGRW
Sbjct: 636 SYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINNNSQTKCKLLDWYGSGEIVAEGRW 695
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVNQ 172
SSNDPTA+VH++PIGP A+RV +DVA KPN++LWRPT EMTCIEEAL ST+A DKVN+
Sbjct: 696 SSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSDKVNE 755
BLAST of Chy11G193550 vs. ExPASy TrEMBL
Match:
A0A5A7TBX7 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001660 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 3.4e-60
Identity = 123/183 (67.21%), Postives = 137/183 (74.86%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLS QDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 624 PDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 683
Query: 76 *YLKKQ---------------------------SINNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ SINNNSQ KCKLLD YGS EIVAEGRW
Sbjct: 684 SYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINNNSQTKCKLLDWYGSGEIVAEGRW 743
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVNQ 172
SSNDPTA+VH++PIGP A+RV +DVA KPN++LWRPT EMTCIEEAL ST+A +KVN+
Sbjct: 744 SSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSNKVNE 803
BLAST of Chy11G193550 vs. ExPASy TrEMBL
Match:
A0A5A7T097 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001590 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 5.7e-60
Identity = 124/183 (67.76%), Postives = 135/183 (73.77%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PD GHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 634 PDHGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 693
Query: 76 *YLKKQ---------------------------SINNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ +INNNSQ KCKLLD YGS EIVAEGRW
Sbjct: 694 SYLKKQTEPSEELSNATASVLKQLNIPPMPSPLNINNNSQTKCKLLDWYGSGEIVAEGRW 753
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVNQ 172
SSNDPT LVH+VPIGP A+RV VDVA KPN++LWRPT EMTCIEEAL ST+ DKVN+
Sbjct: 754 SSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKVNE 813
BLAST of Chy11G193550 vs. NCBI nr
Match:
TYJ95916.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 236 bits (602), Expect = 5.65e-76
Identity = 124/183 (67.76%), Postives = 135/183 (73.77%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PD GHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 29 PDHGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 88
Query: 76 *YLKKQS---------------------------INNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ+ INNNSQ KCKLLD YGS EIVAEGRW
Sbjct: 89 SYLKKQTEPSEELSNATASVLKQLNIPPMPSPLNINNNSQTKCKLLDWYGSGEIVAEGRW 148
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVNQ 171
SSNDPT LVH+VPIGP A+RV VDVA KPN++LWRPT EMTCIEEAL ST+ DKVN+
Sbjct: 149 SSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKVNE 208
BLAST of Chy11G193550 vs. NCBI nr
Match:
KAA0038435.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 238 bits (608), Expect = 2.87e-75
Identity = 125/184 (67.93%), Postives = 137/184 (74.46%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 146 PDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 205
Query: 76 *YLKKQ----------------------------SINNNSQIKCKLLDLYGS*EIVAEGR 135
YLKKQ SINNNSQ KCKLLD YGS EIVAEGR
Sbjct: 206 SYLKKQTEPSEEELSNATASVFKRLNIPPMSSPSSINNNSQTKCKLLDWYGSGEIVAEGR 265
Query: 136 WSSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKVN 171
WSSNDPTA+VH++PIGP A+RV VDVA KPN++LWRP EMTCIEEAL ST+A DKVN
Sbjct: 266 WSSNDPTAMVHHIPIGPHAIRVWVDVAKKPNAYLWRPISEMTCIEEALGSTVAWPSDKVN 325
BLAST of Chy11G193550 vs. NCBI nr
Match:
TYK25923.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 234 bits (597), Expect = 1.07e-73
Identity = 122/178 (68.54%), Postives = 134/178 (75.28%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 146 PDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 205
Query: 76 *YLKKQ---------------------------SINNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ SINNNSQ KCKLLD YGS EIVAEGRW
Sbjct: 206 SYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINNNSQTKCKLLDWYGSGEIVAEGRW 265
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKV 166
SSNDPTA+VH++PIGP A+RV +DVA KPN++LWRPT EMTCIEEAL ST+A DKV
Sbjct: 266 SSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSDKV 323
BLAST of Chy11G193550 vs. NCBI nr
Match:
KAA0066537.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 232 bits (592), Expect = 6.13e-73
Identity = 123/178 (69.10%), Postives = 132/178 (74.16%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 146 PDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 205
Query: 76 *YLKKQ---------------------------SINNNSQIKCKLLDLYGS*EIVAEGRW 135
YLKKQ SINNNS KCKLLD YGS EIVAEGRW
Sbjct: 206 SYLKKQAEPSEELSNATASVLKRLNIPPMPSPSSINNNSHTKCKLLDWYGSGEIVAEGRW 265
Query: 136 SSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCDKV 166
SSNDPTALVH+VPIGP A+RV VDVA KPN +LW+PT EMTCIEEAL ST+A DKV
Sbjct: 266 SSNDPTALVHHVPIGPHAIRVWVDVAKKPNEYLWKPTSEMTCIEEALGSTVAWPSDKV 323
BLAST of Chy11G193550 vs. NCBI nr
Match:
KAA0060366.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 233 bits (594), Expect = 1.94e-71
Identity = 124/187 (66.31%), Postives = 135/187 (72.19%), Query Frame = 0
Query: 16 PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS 75
PD GHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+
Sbjct: 287 PDHGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKEEMVEMKTMKDEMIEMKALML 346
Query: 76 *YLKKQ-------------------------------SINNNSQIKCKLLDLYGS*EIVA 135
YLKKQ SINNNSQ KCKLLD YGS EIVA
Sbjct: 347 SYLKKQTEPSEELSNATASVLKRLNIPPMPSPSINLFSINNNSQTKCKLLDWYGSGEIVA 406
Query: 136 EGRWSSNDPTALVHYVPIGPQAVRV*VDVATKPNSHLWRPT*EMTCIEEALESTLA*LCD 171
EGRWSSND TA+VH +PIGP A+RV VDVA KPN++LWRPT EMTCIEEAL ST+A D
Sbjct: 407 EGRWSSNDSTAMVHRIPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSD 466
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D211 | 8.9e-61 | 67.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7TAN8 | 1.2e-60 | 67.93 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00... | [more] |
| A0A5A7TEM3 | 2.6e-60 | 67.76 | Putative TNP2-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| A0A5A7TBX7 | 3.4e-60 | 67.21 | Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| A0A5A7T097 | 5.7e-60 | 67.76 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
