Chy11G193290 (gene) Cucumber (hystrix) v1

Overview
NameChy11G193290
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMitochondrial transcription termination factor family protein
LocationchrH11: 10280248 .. 10284689 (+)
RNA-Seq ExpressionChy11G193290
SyntenyChy11G193290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGTGGGAATTCTTTTGCATTTACCTGTTTGCTTCCTCCCCTCCACTATCTTTGATCCGGACGTTGGTATATATTGTGAACTCAACTCTTGTTTATTTTGGTTTTATTATTATTACTGCATCTCCCTTTCAAAAAAATAATTTAAAGTTGAACAAAAGCACCCAGTGTACAATTAAAATGACACTTTAAGATCATTTCTCTTTTTGTTAAATTTCACAAAGTGTCTCATCTTTTTTCTATTTGTCCTTTAAACAAACACACCTTTATTCTAGAGCCGATCCCACCTCATTTTCTAAATTATAAAAATAGCAAATTTAGATTAATGTAATTTTAATTTATATTCCATATCTGCATTTATTATTGTTTAATTGAATATTTTTGTATTCCTCATTGTTGAATAGGAAATTTTGATGAAATTTAGGGTTGCCTTTAATGCAATCACAAATTGCTACATCCTTTACTAAATTAACGATGAAAAATATAAATAATTAAATTTTGGACTAATTAAAAAAAATTGATATGTGTCTAAAATTAAAAGTGAAAACATAAATTGACTAATTCTAATGATGCCACATGTTTTCATTATGACTATTGGATCAAGTTAATTATTAAATATTATTTACTTAGGCTAAGTTCAATTGAGCCAGAAAGTAAGCTTAATTTAGTCCAAAATGCTAAATATGACTCAAAGCCCATAAAGTCCAACAGACAATTCTATAAATAGAGGAGTTCTCATTTGTAAGGGGTTAGGAATTTTTTATTCCAGAAGGTCTAAGAGAGAATTCTCTTAAGAGCTAAAAGACTCCAATTTCAAGAACATCACATGCTCCACTTCCTCATATCAAGCATAAACATCAAATCTACGCATCCAATCAAGAGAGAATCAGAGTATCAAATTCTAGAGATCGAACCACATCACATCAAATTAATATAAATACAACATCAACTCAAGTTCACCTTCATGAATCAAATTTCTCTGAAAATCTCGTGCGAACAAATTGACACGTCCGGTGGGATCTCTACCTCTCATCTCTATCTCGAAACTCAAATCAACAAACCAACTAATGACACTAAGGAAGGCTGCATCCAAATCTTCTGTTGCAAGCGACGCCTACACAGAACATGTCACCCGCAATCGTTCTAAAGGGATCATCCAACAGCAAGATCAAAGTTCTGTCATCGCACAGAGCATCCTTAAGCAACTGATGGAATCTCCTAAAGGCGAGATCATCATCAGAGAAAATCCTTTGTTCGACTACTCTACTTATGCTTCTGATCTATCAAAGCAAGAATCAGACTTTGTAGTGTCTGTCATGATGACTGGATGTAACTATTGAGGCCGCTATGACAGAGATGGAGAGGAAAATAAATTTTCTAATGAAAGTTGTCAAGGAGCGATATCAAATCACTACCTTGAAAGATCAAATGAAAGCTTGTGAAACTACTGAGTCGAGCAAAACTCTTGCTACCAAAGCTAACAATAAAGGAAAAGCTGTGTTTTAGGAAAACAAGACGAAACAATCCATCCTCATCATCTCCCTGTCAGTCCAACAACTGCAAGATATGATCGCAAGCTCCATAAGAGCTCAATATGGAGGACTGCTACAAACTTCTTTTATGTAGTCCAAGCCATATACCAAGAGAATCAATGACCTATGAATGCCCGTTGGGTACCAACCTTCAAATTTCTAACAATTCAATGGAAAGGACAATCCAAAGCAACACATTGCTCACTTTATTGGAACATGCGAAAACGCAGGTTCAAGGGTAGACTAACTAGTCAGGCAATTCGTTCGAAGCTTGAAAGAAAATGCTTTCGAGAGGTATACTGATCTAGAGTCAAAAGTCATTGACAACTTGGAACTACTAGAAAAAGATTTTCTAAACCTCTTATATAGCATCGGCGCACTGTAAGCATGATGGAGCTTACAAACACAAGACAATGAATGAACTGATTCATCTTCATCTTCTTCCATATGCCGTAGTTGAGAGGATTCATCTTCATCTTCTCCTATGTGTTGCGGCCTAGAGGATTCATCTTCATATTCTCCCATTTGTTGCAGCCTAGAGGATTCATCTTCATCTTCATCTTCTCCCATCTGTTGCAGTCGAGAGGATTCATCTTCATCTTCTCACATGTGTCCCAGCCGAGAGGATCATCATTTTCATCTTCTCCTATGTGTTGCAGCCGATAGGTTGGTGTAGTCTCGCTTCTCCATCTTCAAGCTTGGTGTGATCCATCATCAAGTTTAAGTTAAAATAATAATAAAGTCAACTACACTTTGATGCAATCAAAGTCGGTGTGCTCCATCTTCAAGTTTGCTTCAATCAAGTTTGTCCAAATGCTTTATCTCCAAGCTTTAACACTCTTGCTTTAAAAAAGGAAAGTTATTATTAAAAAAAAAAATTGGTGAGTAAAAAAATAAAACTGTAAAAATGAGAAAAAACGAAAGTAAAGAAAAGAAAAGAAAAACGAAAAAAGAAAGAAAAGAAAGAAAAGAAAAATGAAAAAGAAAAAAAAAAAGAAAAAAAAAAAGAAAAAGAGAAGAAGAACGAAGAAGCTCGATTGTTCCTACTAGGGAGGTGGATTTGACGGCAAATGCCCACTCGTCCACTAGTAGAAGTTGGATCGCTGACAATGAAAAAGAGCCAAGATGCCCGATTGTTCCTATTAGAAAGGTGGATCTGACGACAAATACGCAATCGTCCCCTAGTAGAAACAAGATGCTCGATGCAGCTGAGGGGATTCATCTTCATTCTTCATCTTCTCCCATGTGTTGTAGTCGAGAGGATTCATCTTCACCTTCTCCCATGTGTCGCAGTCGAGAGGATCATCATTTTCATCTTCTCTCATGTGTTGCATCCGATAGGTTGGTGGTCTCGCTTCTCCATCTTCAAGCTTGGTGTGATCCATCATCAAGTTCAAGTCAAAATAGTGATAAAGTCAAGTACACTTTGATGCAAAGTCGGTGTGCTCCATCTTCAAGTTTGCTTCAATCAAGTTTGTTCAAGTGCTCCATCTCCAAGCTTTAACACCCTTGCTTAAAAAAAGGGAATAAGTTATTATTAAAAATTTGGCGGAGCAAAAATTAGAGAAATTCGTTCAATTTTGAGAGCAATCTTGTTTAGTTCTCAGTCGAAATGAGCAATGTGTTTAGGGTTTAGGATTTTGTGAGAATATCGAATGTTTGGGCTTCCAAGGGTATTTTGGTAATTTGAGACAACACACAATCTTAGTATCGTGTTCGATCGAGATGGAATGAGAAATTATACATTGAACGAGTTTTTTAAGCATCTTGGACCATAGTTTCCTAGAGTTCAATTGGCAAGTACTCTTGATATTCTCGATCGGAATTGCCCCAAGTTTAACACAATATTTGGGATTTTAGAATCTTGCTTTCAAGCTTTTGTTCCTTAGAAGCATCAACAAGAACAACCTTAAAGAAATGAGGATTTAATCTAATCAACATTATATTTGTGTTAGCTATTTAATGGAGTGTCTATCAAACAAGTCAACAAACAACTTCCTCAACAAAATTCTCAAAAATTTGTCATAAAGTCAACTTAGAATCATCAAGACAAGTTGAGACCGAGGAAGTTGTATGTTTGTATGTGTAGACACTTTTTGAATAAGTTGTGGGATGTGCAAAATATAAAATCTTTGGATTAGAAGGGAAGTTGAAAAGACGACATATAATTAATGAGGTTGATACAATTAAATTTAGTGATATTTACTCGTTTGGGAGCAAACTAGTATAGTTTTCGACCAAGATGAGTCATTTGGGCTGCTAAGGGTATTTTGGTCATTCGATAAATTTCTTTATTTTCAATTTTTTAAAAAAAGAACACTCTATTCAAACTCGGCCATGATGGACAGAGAAGTTATGTTGAATTTTTTTTTTTTAAATTTGTGAAGATTCTCGGTGTTGAGGTCGGTCGAGATTGATCGAGAAAAACAAAATTATAAGTTTTTCAAAAGTTATGCTACTTTTAAAATGTAAAACTGAAAATGTGCTGTTTTTCAAAATTTCATCTTCTACTATGCTATAAGCTACTAAGTAACACCAAAATCGTTACAGCCGTGGAATTTCCCTTTGTTCTTTTTTCTTTTATGGCATCACAGGCCATTATATTTTATGAAATCGTAGAATGAAGTCAAATTCAATCATTTCCTTCTGCAACTACGCCTTGTGCCACCGTTTTTGTACATCTATTAGGGTTTAAATGAATTTAAGGGCTGTGGTTCTTCTGGAGTGAAGGGTTCGAGGAAAAAAGCATCCTCGAAATGTTCACAAAGCGCAAACAGCTTGAAGGTACGCCTGAAGAAATCGCCTCTCAAAACTGGGATTACTTGAAAAATATTGGAATTCATGAGAGAAAGCTCCGTCATATGTTTTCCAAGTATCCCAAGATTCTTACTATTTGTCTTAATGGATAG

mRNA sequence

ATGTGGGTGGGAATTCTTTTGCATTTACCTGTTTGCTTCCTCCCCTCCACTATCTTTGATCCGGACGTTGGGCTGTGGTTCTTCTGGAGTGAAGGGTTCGAGGAAAAAAGCATCCTCGAAATGTTCACAAAGCGCAAACAGCTTGAAGGTACGCCTGAAGAAATCGCCTCTCAAAACTGGGATTACTTGAAAAATATTGGAATTCATGAGAGAAAGCTCCGTCATATGTTTTCCAAGTATCCCAAGATTCTTACTATTTGTCTTAATGGATAG

Coding sequence (CDS)

ATGTGGGTGGGAATTCTTTTGCATTTACCTGTTTGCTTCCTCCCCTCCACTATCTTTGATCCGGACGTTGGGCTGTGGTTCTTCTGGAGTGAAGGGTTCGAGGAAAAAAGCATCCTCGAAATGTTCACAAAGCGCAAACAGCTTGAAGGTACGCCTGAAGAAATCGCCTCTCAAAACTGGGATTACTTGAAAAATATTGGAATTCATGAGAGAAAGCTCCGTCATATGTTTTCCAAGTATCCCAAGATTCTTACTATTTGTCTTAATGGATAG

Protein sequence

MWVGILLHLPVCFLPSTIFDPDVGLWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKILTICLNG*
Homology
[Close]
BLAST of Chy11G193290 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNI-GIHERKLRHMFSKYPKI 84
          +WFF  +GF++ SI +M  K KQLE    ++AS+NWDYL NI GI ERKL ++ S+ PKI
Sbjct: 10 MWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPKI 69

Query: 85 LTICLN 90
          LT+ L+
Sbjct: 70 LTLRLD 75

[Close]
BLAST of Chy11G193290 vs. ExPASy TrEMBL
Match: A0A067LEZ1 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10773 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-13
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          +WFF   GF++KSI EMF K K+LEG   E AS+NW YLK+IGI ERKL ++ SK PKIL
Sbjct: 13 MWFFRDRGFDDKSIREMFRKCKRLEGVQRERASENWSYLKSIGIQERKLPYVVSKCPKIL 72

Query: 85 TICLN 90
          T+ LN
Sbjct: 73 TLGLN 77

[Close]
BLAST of Chy11G193290 vs. ExPASy TrEMBL
Match: A0A2C9UF80 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G113100 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-13
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          LWFF   GF++KSI EMF K K+LEG  +E AS+NW YLK+IGI ER+L ++ SK PKIL
Sbjct: 32 LWFFRDRGFDDKSIHEMFRKCKRLEGIQKERASENWSYLKSIGIQERRLPYVISKCPKIL 91

Query: 85 TICLN 90
          T+ LN
Sbjct: 92 TLDLN 96

[Close]
BLAST of Chy11G193290 vs. ExPASy TrEMBL
Match: A0A2N9F246 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8843 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-13
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          +WFF   GF++KSI EMF K K+LEG   E AS+NW YLK+IGIHERKL  + SK PKIL
Sbjct: 13 MWFFKDRGFDDKSIHEMFNKCKRLEGAQRERASENWAYLKSIGIHERKLPSLVSKCPKIL 72

Query: 85 TICLN 90
          T+ L+
Sbjct: 73 TLGLH 77

[Close]
BLAST of Chy11G193290 vs. ExPASy TrEMBL
Match: A0A2I4GCF1 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Juglans regia OX=51240 GN=LOC109006680 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.2e-13
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          +WFF   GF++KSI EMF K K+LEG   E ASQNW YLK+IGIHERKL  + SK PKIL
Sbjct: 13 IWFFRDRGFDDKSIQEMFKKCKRLEGVQSENASQNWAYLKSIGIHERKLPSIVSKCPKIL 72

Query: 85 TICLN 90
           + L+
Sbjct: 73 ALGLH 77

[Close]
BLAST of Chy11G193290 vs. ExPASy TrEMBL
Match: B9RKX3 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1563910 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 26 WFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKILT 85
          WFF  +GF++KSI EMF K K+LEG   E AS+NW YLK++GI ERKL  + SK PKILT
Sbjct: 13 WFFRDKGFDDKSIHEMFRKCKRLEGLQRERASENWSYLKSVGIQERKLPCVISKCPKILT 72

Query: 86 ICLN 90
          + LN
Sbjct: 73 LGLN 76

[Close]
BLAST of Chy11G193290 vs. NCBI nr
Match: XP_031744171.1 (LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 122 bits (306), Expect = 2.62e-30
Identity = 59/79 (74.68%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 12  CFLPSTIFDPDVGLWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHER 71
           CFL          LWFFWS+GFEEKSI +   K KQLEG P EIASQNWDYLKNIGIHER
Sbjct: 164 CFLVVYQSSGARRLWFFWSKGFEEKSISKCSQKCKQLEGMPXEIASQNWDYLKNIGIHER 223

Query: 72  KLRHMFSKYPKILTICLNG 90
           +LRHMFSKYPKILTICLNG
Sbjct: 224 QLRHMFSKYPKILTICLNG 242

[Close]
BLAST of Chy11G193290 vs. NCBI nr
Match: XP_012076631.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Jatropha curcas] >KDP47046.1 hypothetical protein JCGZ_10773 [Jatropha curcas])

HSP 1 Score: 83.2 bits (204), Expect = 1.66e-16
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          +WFF   GF++KSI EMF K K+LEG   E AS+NW YLK+IGI ERKL ++ SK PKIL
Sbjct: 13 MWFFRDRGFDDKSIREMFRKCKRLEGVQRERASENWSYLKSIGIQERKLPYVVSKCPKIL 72

Query: 85 TICLN 89
          T+ LN
Sbjct: 73 TLGLN 77

[Close]
BLAST of Chy11G193290 vs. NCBI nr
Match: XP_021594844.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X1 [Manihot esculenta])

HSP 1 Score: 83.2 bits (204), Expect = 2.24e-16
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 

Query: 11  VCFLPSTIFD----PDVG--LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLK 70
           +C  PS   +     + G  LWFF   GF++KSI EMF K K+LEG  +E AS+NW YLK
Sbjct: 28  ICISPSGNMELASTSNAGSILWFFRDRGFDDKSIHEMFRKCKRLEGIQKERASENWSYLK 87

Query: 71  NIGIHERKLRHMFSKYPKILTICLN 89
           +IGI ER+L ++ SK PKILT+ LN
Sbjct: 88  SIGIQERRLPYVISKCPKILTLDLN 112

[Close]
BLAST of Chy11G193290 vs. NCBI nr
Match: XP_021594846.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X3 [Manihot esculenta] >XP_021594847.1 transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X3 [Manihot esculenta] >KAG8637356.1 hypothetical protein MANES_15G113100v8 [Manihot esculenta])

HSP 1 Score: 82.8 bits (203), Expect = 2.36e-16
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          LWFF   GF++KSI EMF K K+LEG  +E AS+NW YLK+IGI ER+L ++ SK PKIL
Sbjct: 13 LWFFRDRGFDDKSIHEMFRKCKRLEGIQKERASENWSYLKSIGIQERRLPYVISKCPKIL 72

Query: 85 TICLN 89
          T+ LN
Sbjct: 73 TLDLN 77

[Close]
BLAST of Chy11G193290 vs. NCBI nr
Match: XP_021594845.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X2 [Manihot esculenta] >OAY29039.1 hypothetical protein MANES_15G113100v8 [Manihot esculenta])

HSP 1 Score: 82.8 bits (203), Expect = 2.76e-16
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNIGIHERKLRHMFSKYPKIL 84
          LWFF   GF++KSI EMF K K+LEG  +E AS+NW YLK+IGI ER+L ++ SK PKIL
Sbjct: 32 LWFFRDRGFDDKSIHEMFRKCKRLEGIQKERASENWSYLKSIGIQERRLPYVISKCPKIL 91

Query: 85 TICLN 89
          T+ LN
Sbjct: 92 TLDLN 96

[Close]
BLAST of Chy11G193290 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNI-GIHERKLRHMFSKYPKI 84
          +WFF  +GF++ SI +M  K KQLE    ++AS+NWDYL NI GI ERKL ++ S+ PKI
Sbjct: 10 MWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPKI 69

Query: 85 LTICLN 90
          LT+ L+
Sbjct: 70 LTLRLD 75

[Close]
BLAST of Chy11G193290 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNI-GIHERKLRHMFSKYPKI 84
          +WFF  +GF++ SI +M  K KQLE    ++AS+NWDYL NI GI ERKL ++ S+ PKI
Sbjct: 10 MWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPKI 69

Query: 85 LTICLN 90
          LT+ L+
Sbjct: 70 LTLRLD 75

[Close]
BLAST of Chy11G193290 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 25 LWFFWSEGFEEKSILEMFTKRKQLEGTPEEIASQNWDYLKNI-GIHERKLRHMFSKYPKI 84
          +WFF  +GF++ SI +M  K KQLE    ++AS+NWDYL NI GI ERKL ++ S+ PKI
Sbjct: 10 MWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPKI 69

Query: 85 LTICLN 90
          LT+ L+
Sbjct: 70 LTLRLD 75

The following BLAST results are available for this feature:
BLAST of Chy11G193290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL63.0e-1253.03Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
BLAST of Chy11G193290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A067LEZ12.1e-1361.54Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10773 PE=3 SV=1[more]
A0A2C9UF802.8e-1361.54Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G113100 PE=3 SV=... [more]
A0A2N9F2462.8e-1361.54Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8843 PE=3 SV=1[more]
A0A2I4GCF16.2e-1361.54transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Juglans ... [more]
B9RKX31.4e-1260.94Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1563910 PE=3 SV=1[more]
BLAST of Chy11G193290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744171.12.62e-3074.68LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mito... [more]
XP_012076631.11.66e-1661.54transcription termination factor MTERF6, chloroplastic/mitochondrial [Jatropha c... [more]
XP_021594844.12.24e-1651.76transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X1 ... [more]
XP_021594846.12.36e-1661.54transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X3 ... [more]
XP_021594845.12.76e-1661.54transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X2 ... [more]
BLAST of Chy11G193290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38160.12.1e-1353.03Mitochondrial transcription termination factor family protein [more]
AT4G38160.22.1e-1353.03Mitochondrial transcription termination factor family protein [more]
AT4G38160.32.1e-1353.03Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 14..89
e-value: 1.7E-5
score: 26.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G193290.1Chy11G193290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0032502 developmental process
cellular_component GO:0009507 chloroplast