Chy11G193270 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G193270
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 10279377 .. 10281492 (+)
RNA-Seq Expression	Chy11G193270
Synteny	Chy11G193270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCAGCTGATTATTGGAAAGACATTTACACAGAAAAGAATGGAGATTGAAGAACTACAAATTTCCAAATCAAAAAAAAAAAAAAAATGTACAGATGATGATCATCAAATCACTGCAGGAAGTAATAGAGAGAGGAGGGATTGTCAGGGACGAGGAAGCTCCACTTGGTGTCCAACTTGTGGTTGTCTTCGAAGAAGAAGAAGCATCTACAGAGGGGACAAGTGAAGCGATTCCTGTCAATCCATTCCCGGATGCAATTGAAATGAAATAAATGCTCACAATTCGGTAACTTACACACCGAATCTCCTGATCTACCAAACTCTGTCAAACAGATGGAGCAAATCTCCTCTGAGGATCCTCCATCCTCATCGTATGACCTCACCACCAGAACGTCGGTTCCATGTTCTGGGGAGGAGGAGGGCAGGCCAAAAACAGTAGCCACCACGCCCAGAATGGCTTGATTGATACGAAAAAGCGGAATCCACAGGAAAGTGTTGAAGAAAAGGATGGGGAATCGCATAGGGGAAACGAGCCAAAACAAACCCAACATATTGGCGATTGGATTGAAGTTTTAAGCACACACACGGAGAGAGAGAGAGAGAGTTTAGGTGGGAGGTGGTTGATATGAAAAGGGAATTGGATTTGGATCGCCATTATATATAGATATAATAATTGGGATCAGTATAGATTGATATGAAGGAGTCTTGAGTTTTTTGGGCCAAATTAAAGTCGTTGTCTTCACATTCATATACTGATACCCAACTTTTATTGACACAGTTATAAAAGAAATCACTCATATTATTTAACAACCAAAATAAAAGACCTTCATCCATCGTCTTATCCTTTCTAGTTTCTACCCCTTTCCCTTCCATGTGGGTGGGAATTCTTTTGCATTTACCTGTTTGCTTCCTCCCCTCCACTATCTTTGATCCGGACGTTGGTATATATTGTGAACTCAACTCTTGTTTATTTTGGTTTTATTATTATTACTGCATCTCCCTTTCAAAAAAATAATTTAAAGTTGAACAAAAGCACCCAGTGTACAATTAAAATGACACTTTAAGATCATTTCTCTTTTTGTTAAATTTCACAAAGTGTCTCATCTTTTTTCTATTTGTCCTTTAAACAAACACACCTTTATTCTAGAGCCGATCCCACCTCATTTTCTAAATTATAAAAATAGCAAATTTAGATTAATGTAATTTTAATTTATATTCCATATCTGCATTTATTATTGTTTAATTGAATATTTTTGTATTCCTCATTGTTGAATAGGAAATTTTGATGAAATTTAGGGTTGCCTTTAATGCAATCACAAATTGCTACATCCTTTACTAAATTAACGATGAAAAATATAAATAATTAAATTTTGGACTAATTAAAAAAAATTGATATGTGTCTAAAATTAAAAGTGAAAACATAAATTGACTAATTCTAATGATGCCACATGTTTTCATTATGACTATTGGATCAAGTTAATTATTAAATATTATTTACTTAGGCTAAGTTCAATTGAGCCAGAAAGTAAGCTTAATTTAGTCCAAAATGCTAAATATGACTCAAAGCCCATAAAGTCCAACAGACAATTCTATAAATAGAGGAGTTCTCATTTGTAAGGGGTTAGGAATTTTTTATTCCAGAAGGTCTAAGAGAGAATTCTCTTAAGAGCTAAAAGACTCCAATTTCAAGAACATCACATGCTCCACTTCCTCATATCAAGCATAAACATCAAATCTACGCATCCAATCAAGAGAGAATCAGAGTATCAAATTCTAGAGATCGAACCACATCACATCAAATTAATATAAATACAACATCAACTCAAGTTCACCTTCATGAATCAAATTTCTCTGAAAATCTCGTGCGAACAAATTGACACGTCCGGTGGGATCTCTACCTCTCATCTCTATCTCGAAACTCAAATCAACAAACCAACTAATGACACTAAGGAAGGCTGCATCCAAATCTTCTGTTGCAAGCGACGCCTACACAGAACATGTCACCCGCAATCGTTCTAAAGGGATCATCCAACAGCAAGATCAAAGTTCTGTCATCGCACAGAGCATCCTTAAGCAACTGATGGAATCTCCTAAAGGCGAGATCATCATCAGAGAA

mRNA sequence

TTTGCAGCTGATTATTGGAAAGACATTTACACAGAAAAGAATGGAGATTGAAGAACTACAAATTTCCAAATCAAAAAAAAAAAAAAAATGTACAGATGATGATCATCAAATCACTGCAGGAAGTAATAGAGAGAGGAGGGATTGTCAGGGACGAGGAAGCTCCACTTGGTGTCCAACTTGTGGTTGTCTTCGAAGAAGAAGAAGCATCTACAGAGGGGACAAGTGAAGCGATTCCTGTCAATCCATTCCCGGATGCAATTGAAATGAAATAAATGCTCACAATTCGGTAACTTACACACCGAATCTCCTGATCTACCAAACTCTGTCAAACAGATGGAGCAAATCTCCTCTGAGGATCCTCCATCCTCATCGTATGACCTCACCACCAGAACGTCGGTTCCATGTTCTGGGGAGGAGGAGGGCAGGCCAAAAACAGTAGCCACCACGCCCAGAATGGCTTGATTGATACGAAAAAGCGGAATCCACAGGAAAGTGTTGAAGAAAAGGATGGGGAATCGCATAGGGGAAACGAGCCAAAACAAACCCAACATATTGGCGATTGGATTGAAGTTTTAAGCACACACACGGAGAGAGAGAGAGAGAGTTTAGAA

Coding sequence (CDS)

TTTGCAGCTGATTATTGGAAAGACATTTACACAGAAAAGAATGGAGATTGAAGAACTACAAATTTCCAAATCAAAAAAAAAAAAAAAATGTACAGATGATGATCATCAAATCACTGCAGGAAGTAATAGAGAGAGGAGGGATTGTCAGGGACGAGGAAGCTCCACTTGGTGTCCAACTTGTGGTTGTCTTCGAAGAAGAAGAAGCATCTACAGAGGGGACAAGTGAAGCGATTCCTGTCAATCCATTCCCGGATGCAATTGAAATGAAATAAATGCTCACAATTCGGTAACTTACACACCGAATCTCCTGATCTACCAAACTCTGTCAAACAGATGGAGCAAATCTCCTCTGAGGATCCTCCATCCTCATCGTATGACCTCACCACCAGAACGTCGGTTCCATGTTCTGGGGAGGAGGAGGGCAGGCCAAAAACAGTAGCCACCACGCCCAGAATGGCTTGATTGATACGAAAAAGCGGAATCCACAGGAAAGTGTTGAAGAAAAGGATGGGGAATCGCATAGGGGAAACGAGCCAAAACAAACCCAACATATTGGCGATTGGATTGAAGTTTTAAGCACACACACGGAGAGAGAGAGAGAGAGTTTAGAA

Protein sequence

FAADYWKDIYTEKNGD*RTTNFQIKKKKKMYR**SSNHCRK**REEGLSGTRKLHLVSNLWLSSKKKKHLQRGQVKRFLSIHSRMQLK*NKCSQFGNLHTESPDLPNSVKQMEQISSEDPPSSSYDLTTRTSVPCSGEEEGRPKTVATTPRMA*LIRKSGIHRKVLKKRMGNRIGETSQNKPNILAIGLKF*AHTRRERERV*X

Homology

The following BLAST results are available for this feature:

BLAST of Chy11G193270 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G193270 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G193270 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G193270 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G193270.1	Chy11G193270.1	mRNA