Chy11G192570 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTCGAAAGCTGTTGTGTTTGCGTGTCTGTTGTTGTTAGTCTCAGCTGTCGTTGCTATTGCTGCTGAAGGAAATCAAGAGCAACCTCAGAATGCTAAAGGTATATATTCTTTATTGTTTTTTGTAATTTGTATCAATAATAATCAATTACCATATATTGAAAGTCACCATGATAAATCTATTGCACCAAAATTCAAGAGTTTGATCTAAATATTTCTTTTTAGAATTTCAATTTGATAATATATTTACAATAAACTCTATTAGTCATGATAGACCCAAAAATTTAATGTAAATTGTGTTATATATATATATATTTGTTTTGCTACCAACTCTTTTAGTTAAAAAAAAAAAATTACATGTTATTTTTGAAATTTTACAACGAACCTTAAGCACACAAAACTATCTCTTATTAAGGCTTATAGATAAGAAAAAAATTAAAAACACATAAAAAAAATAGTATAAAAAAATAGTATTTAGGAGTTTCTTCGAAGAAAAGACAGACTACTTGCCCCTCGTAAACAAACCAAAATAACCAAATTGTTTTTTTTTTGTTTTACAATTTCCCTAGTATTTATTAGGTTATTTTTTAAGACAATAATTACATAAAAAGTTATGATAAAGTTCCAAAATTTTGAAAATATATATAAAGAAGTTTTGTAGACGAATAATTATTATGCATTACACTTCATATATTGATAAATTGGGTCATGAAGACACAGGTGCAAATGATAAAACTGGAGTAGAAGAGTCAAAGCTACACTGCTACCATGGATGTTGCCAGTATTATGGGCGTGAATGCGCAAAATGCTGCAGAAATCTTGCAGAAGCACAGGCTGCTGCCGCTGCTGCTAATGCTGCGACAGAAGATGAGAATAAAATGGAAGTAACCCCACAGGGATGGGGAGGTCACGGTGGATGGGGAGGTCATGGCGATTGGGGCGGACACAGAGGTGGAGGGGGTGGACATAGAGGTGGAGGTAGAGGTGGAGGTGGGAAGTGAGTGGGAGA ATGAACTCGAAAGCTGTTGTGTTTGCGTGTCTGTTGTTGTTAGTCTCAGCTGTCGTTGCTATTGCTGCTGAAGGAAATCAAGAGCAACCTCAGAATGCTAAAGACACAGGTGCAAATGATAAAACTGGAGTAGAAGAGTCAAAGCTACACTGCTACCATGGATGTTGCCAGTATTATGGGCGTGAATGCGCAAAATGCTGCAGAAATCTTGCAGAAGCACAGGCTGCTGCCGCTGCTGCTAATGCTGCGACAGAAGATGAGAATAAAATGGAAGTAACCCCACAGGGATGGGGAGGTCACGGTGGATGGGGAGGTCATGGCGATTGGGGCGGACACAGAGGTGGAGGGGGTGGACATAGAGGTGGAGGTAGAGGTGGAGGTGGGAAGTGAGTGGGAGA ATGAACTCGAAAGCTGTTGTGTTTGCGTGTCTGTTGTTGTTAGTCTCAGCTGTCGTTGCTATTGCTGCTGAAGGAAATCAAGAGCAACCTCAGAATGCTAAAGACACAGGTGCAAATGATAAAACTGGAGTAGAAGAGTCAAAGCTACACTGCTACCATGGATGTTGCCAGTATTATGGGCGTGAATGCGCAAAATGCTGCAGAAATCTTGCAGAAGCACAGGCTGCTGCCGCTGCTGCTAATGCTGCGACAGAAGATGAGAATAAAATGGAAGTAACCCCACAGGGATGGGGAGGTCACGGTGGATGGGGAGGTCATGGCGATTGGGGCGGACACAGAGGTGGAGGGGGTGGACATAGAGGTGGAGGTAGAGGTGGAGGTGGGAAGTGAGTGGGAGA MNSKAVVFACLLLLVSAVVAIAAEGNQEQPQNAKDTGANDKTGVEESKLHCYHGCCQYYGRECAKCCRNLAEAQAAAAAANAATEDENKMEVTPQGWGGHGGWGGHGDWGGHRGGGGGHRGGGRGGGGK*VGX Homology
BLAST of Chy11G192570 vs. ExPASy TrEMBL
Match: A0A1S4E0U4 (CYC02 protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.8e-40 Identity = 102/130 (78.46%), Postives = 111/130 (85.38%), Query Frame = 0
BLAST of Chy11G192570 vs. ExPASy TrEMBL
Match: A0A5A7UI77 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00550 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 5.6e-39 Identity = 103/133 (77.44%), Postives = 113/133 (84.96%), Query Frame = 0
BLAST of Chy11G192570 vs. ExPASy TrEMBL
Match: A0A5D3BV93 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00080 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38 Identity = 101/130 (77.69%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Chy11G192570 vs. ExPASy TrEMBL
Match: A0A1S3C295 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38 Identity = 101/130 (77.69%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Chy11G192570 vs. ExPASy TrEMBL
Match: A0A0A0LQ85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408350 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34 Identity = 81/95 (85.26%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of Chy11G192570 vs. NCBI nr
Match: XP_031737253.1 (glycine-rich cell wall structural protein-like isoform X1 [Cucumis sativus] >KAE8652268.1 hypothetical protein Csa_021972 [Cucumis sativus]) HSP 1 Score: 212 bits (539), Expect = 3.33e-68 Identity = 114/128 (89.06%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Chy11G192570 vs. NCBI nr
Match: XP_031737254.1 (late embryogenesis abundant protein M17-like isoform X2 [Cucumis sativus]) HSP 1 Score: 202 bits (515), Expect = 1.42e-64 Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Chy11G192570 vs. NCBI nr
Match: XP_016901862.1 (PREDICTED: CYC02 protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 177 bits (449), Expect = 2.07e-54 Identity = 101/128 (78.91%), Postives = 110/128 (85.94%), Query Frame = 0
BLAST of Chy11G192570 vs. NCBI nr
Match: KAA0053261.1 (BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 171 bits (433), Expect = 4.10e-52 Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Chy11G192570 vs. NCBI nr
Match: XP_008455979.1 (PREDICTED: BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo] >TYK02908.1 BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 171 bits (433), Expect = 5.28e-52 Identity = 100/128 (78.12%), Postives = 109/128 (85.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|