Chy11G192510 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G192510
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Location	chrH11: 8344043 .. 8344512 (+)
RNA-Seq Expression	Chy11G192510
Synteny	Chy11G192510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCAGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACTTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTTCGTTGCTTAATGCTTTTGCGTCCGTTTTAAGTGCGAAATTTTTCTGAATCTATAGCTCTTTGAGTTTTTCTTGTTCTCCCCAAAAGTAGAACAACGAAAACAGTGTTCAATCTTCATCTTTATTTCTCTCTTCAGTGTTTTAGTTGTGAAACGTTTCAGTAAAATAAGGTAATCTATTTTGCTTGAAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGTGGTTGGCTCCCCGAAGGTGCATAA

mRNA sequence

ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCAGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACTTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGTGGTTGGCTCCCCGAAGGTGCATAA

Coding sequence (CDS)

ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCAGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACTTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGTGGTTGGCTCCCCGAAGGTGCATAA

Protein sequence

MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA*

Homology

[Close]

BLAST of Chy11G192510 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-07
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 5  GARSAFRSFSSSARRAAAHIGSQPKPSSTSP--FRMATNKPLSHRTFRCAPEMSFCLESM 64
          GARS  R  ++S+R AAA  G     + ++P  FR    +       R   E+SFC+ES+
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSVSSSALMTSMLSISRHSCGWLPE 91
          +P+HS ++SALMTS LSIS  + GWL +
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]

BLAST of Chy11G192510 vs. ExPASy TrEMBL
Match: A0A0A0LT36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408420 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.7e-40
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPKPS +SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 93
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92

[Close]

BLAST of Chy11G192510 vs. ExPASy TrEMBL
Match: A0A0A0LN06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408390 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.0e-39
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPK SS+SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 93
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92

[Close]

BLAST of Chy11G192510 vs. ExPASy TrEMBL
Match: A0A5D3BHH0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00120 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.2e-39
Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPKPSSTSPFRMATNKPLSH TFRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 92
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91

[Close]

BLAST of Chy11G192510 vs. ExPASy TrEMBL
Match: A0A1S4E0Y3 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.2e-39
Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPKPSSTSPFRMATNKPLSH TFRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 92
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91

[Close]

BLAST of Chy11G192510 vs. ExPASy TrEMBL
Match: A0A1S4E0X5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.2e-39
Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPKPSSTSPFRMATNKPLSH TFRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 92
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91

[Close]

BLAST of Chy11G192510 vs. NCBI nr
Match: KGN63196.1 (hypothetical protein Csa_022217 [Cucumis sativus])

HSP 1 Score: 175 bits (444), Expect = 4.88e-55
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPKPS +SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92

[Close]

BLAST of Chy11G192510 vs. NCBI nr
Match: KAE8652269.1 (hypothetical protein Csa_021983 [Cucumis sativus] >KGN63193.1 hypothetical protein Csa_022010 [Cucumis sativus])

HSP 1 Score: 174 bits (441), Expect = 1.40e-54
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPK SS+SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEGA 92

[Close]

BLAST of Chy11G192510 vs. NCBI nr
Match: XP_011649972.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 174 bits (440), Expect = 2.25e-54
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPKPS +SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91

[Close]

BLAST of Chy11G192510 vs. NCBI nr
Match: XP_011649976.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus] >XP_011649978.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 172 bits (437), Expect = 5.71e-54
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPK SS+SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91

[Close]

BLAST of Chy11G192510 vs. NCBI nr
Match: XP_011649974.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 172 bits (437), Expect = 6.46e-54
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASIGARSAFRSFSSSARRAAAHIGSQPKPSSTSPFRMATNKPLSHRTFRCAPEMSFCLE 60
          MASIGARSAFRSFS SARRAAAHIGSQPK SS+SPFRMATNKPLSHRTFRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEG 91

[Close]

BLAST of Chy11G192510 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 6  ARSAFRSFSSSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHRTFRCAPEMSFCLESM 65
          ARS FRS +S A   A    + PKP   S+ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEG 92
          +P+H+ ++SAL+ SMLS+SR   GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of Chy11G192510 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 6  ARSAFRSFSSSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHRTFRCAPEMSFCLESM 65
          ARS FRS +S A   A    + PKP   S+ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEG 92
          +P+H+ ++SAL+ SMLS+SR   GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of Chy11G192510 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 6  ARSAFRSFSSSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHRTFRCAPEMSFCLESM 65
          ARS FRS +S A   A    + PKP   S+ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEG 92
          +P+H+ ++SAL+ SMLS+SR   GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of Chy11G192510 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 6  ARSAFRSFSSSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHRTFRCAPEMSFCLESM 65
          ARS FRS +S A   A    + PKP   S+ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWL 89
          +P+H+ ++SAL+ SMLS+SR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

[Close]

BLAST of Chy11G192510 vs. TAIR 10
Match: AT1G28395.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1). )

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 6  ARSAFRSFSSSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHRTFRCAPEMSFCLESM 65
          ARS FRS +S A   A    + PKP   S+ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWL 89
          +P+H+ ++SAL+ SMLS+SR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

The following BLAST results are available for this feature:

BLAST of Chy11G192510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	5.0e-07	42.05	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Chy11G192510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT36	4.7e-40	96.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408420 PE=4 SV=1	[more]
A0A0A0LN06	1.0e-39	96.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408390 PE=4 SV=1	[more]
A0A5D3BHH0	5.2e-39	96.70	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E0Y3	5.2e-39	96.70	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A1S4E0X5	5.2e-39	96.70	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ...	[more]

BLAST of Chy11G192510 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63196.1	4.88e-55	96.74	hypothetical protein Csa_022217 [Cucumis sativus]	[more]
KAE8652269.1	1.40e-54	96.74	hypothetical protein Csa_021983 [Cucumis sativus] >KGN63193.1 hypothetical prote...	[more]
XP_011649972.1	2.25e-54	96.70	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucu...	[more]
XP_011649976.1	5.71e-54	96.70	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucu...	[more]
XP_011649974.1	6.46e-54	96.70	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucu...	[more]

BLAST of Chy11G192510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28395.2	1.8e-12	44.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	1.8e-12	44.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	1.8e-12	44.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.4	1.5e-11	45.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.5	1.5e-11	45.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..39
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..91
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G192510.1	Chy11G192510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy