Chy11G192150 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G192150
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	myosin-J heavy chain-like isoform X3
Location	chrH11: 7550311 .. 7550511 (+)
RNA-Seq Expression	Chy11G192150
Synteny	Chy11G192150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACAATTTAAAGTTGAAGGTCACGAGGCTTCAGTGTTGCTTCAAATTCATCATTCTTACAATAATTGGAGGGATAGTTCAAAGAAAAAATGGTTGGACAAATATGATATAATTGCAGAAGTTTTAGTAAATATTCCATTAGAAATAACAACAGAAGATGCAGAATATCTTGCAAAGTTATGGAAGTTAGTGGAATATCAA

mRNA sequence

GAACAATTTAAAGTTGAAGGTCACGAGGCTTCAGTGTTGCTTCAAATTCATCATTCTTACAATAATTGGAGGGATAGTTCAAAGAAAAAATGGTTGGACAAATATGATATAATTGCAGAAGTTTTAGTAAATATTCCATTAGAAATAACAACAGAAGATGCAGAATATCTTGCAAAGTTATGGAAGTTAGTGGAATATCAA

Coding sequence (CDS)

GAACAATTTAAAGTTGAAGGTCACGAGGCTTCAGTGTTGCTTCAAATTCATCATTCTTACAATAATTGGAGGGATAGTTCAAAGAAAAAATGGTTGGACAAATATGATATAATTGCAGAAGTTTTAGTAAATATTCCATTAGAAATAACAACAGAAGATGCAGAATATCTTGCAAAGTTATGGAAGTTAGTGGAATATCAA

Protein sequence

EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKLWKLVEYQ

Homology

[Close]

BLAST of Chy11G192150 vs. ExPASy TrEMBL
Match: A0A6P6FWK4 (myosin-J heavy chain-like isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107412577 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 30/67 (44.78%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKL 60
           E+FKVE     VL QIH SYNN+R   K    D    I E   NIP  +  +D EYL  L
Sbjct: 348 ERFKVEDQMKFVLGQIHRSYNNYRHYLKHWCYDTCKTIEEARANIPPNVNKDDWEYLVNL 407

Query: 61  WKLVEYQ 68
           W    YQ
Sbjct: 408 WSTPSYQ 414

[Close]

BLAST of Chy11G192150 vs. ExPASy TrEMBL
Match: A0A6P3ZDQ9 (myosin-J heavy chain-like isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107412577 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 30/67 (44.78%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKL 60
           E+FKVE     VL QIH SYNN+R   K    D    I E   NIP  +  +D EYL  L
Sbjct: 348 ERFKVEDQMKFVLGQIHRSYNNYRHYLKHWCYDTCKTIEEARANIPPNVNKDDWEYLVNL 407

Query: 61  WKLVEYQ 68
           W    YQ
Sbjct: 408 WSTPSYQ 414

[Close]

BLAST of Chy11G192150 vs. ExPASy TrEMBL
Match: A0A6P6FXG3 (myosin-J heavy chain-like isoform X3 OS=Ziziphus jujuba OX=326968 GN=LOC107412577 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 30/67 (44.78%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKL 60
           E+FKVE     VL QIH SYNN+R   K    D    I E   NIP  +  +D EYL  L
Sbjct: 315 ERFKVEDQMKFVLGQIHRSYNNYRHYLKHWCYDTCKTIEEARANIPPNVNKDDWEYLVNL 374

Query: 61  WKLVEYQ 68
           W    YQ
Sbjct: 375 WSTPSYQ 381

[Close]

BLAST of Chy11G192150 vs. NCBI nr
Match: XP_038875771.1 (uncharacterized protein LOC120068141 [Benincasa hispida])

HSP 1 Score: 80.9 bits (198), Expect = 7.34e-18
Identity = 39/53 (73.58%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 2   QFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDA 54
           +FKVEGHEASVLLQIH SYN+WR S KK WL KYDII + L NI  EIT EDA
Sbjct: 52  RFKVEGHEASVLLQIHRSYNSWRYSLKKNWLLKYDIITKALANILPEITREDA 104

[Close]

BLAST of Chy11G192150 vs. NCBI nr
Match: XP_024926361.1 (myosin-J heavy chain-like isoform X3 [Ziziphus jujuba])

HSP 1 Score: 56.6 bits (135), Expect = 3.14e-07
Identity = 30/67 (44.78%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKL 60
           E+FKVE     VL QIH SYNN+R   K    D    I E   NIP  +  +D EYL  L
Sbjct: 315 ERFKVEDQMKFVLGQIHRSYNNYRHYLKHWCYDTCKTIEEARANIPPNVNKDDWEYLVNL 374

Query: 61  WKLVEYQ 67
           W    YQ
Sbjct: 375 WSTPSYQ 381

[Close]

BLAST of Chy11G192150 vs. NCBI nr
Match: XP_015875860.1 (myosin-J heavy chain-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 56.6 bits (135), Expect = 3.14e-07
Identity = 30/67 (44.78%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKL 60
           E+FKVE     VL QIH SYNN+R   K    D    I E   NIP  +  +D EYL  L
Sbjct: 348 ERFKVEDQMKFVLGQIHRSYNNYRHYLKHWCYDTCKTIEEARANIPPNVNKDDWEYLVNL 407

Query: 61  WKLVEYQ 67
           W    YQ
Sbjct: 408 WSTPSYQ 414

[Close]

BLAST of Chy11G192150 vs. NCBI nr
Match: XP_024926358.1 (myosin-J heavy chain-like isoform X1 [Ziziphus jujuba] >XP_024926359.1 myosin-J heavy chain-like isoform X1 [Ziziphus jujuba] >XP_024926360.1 myosin-J heavy chain-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 56.6 bits (135), Expect = 3.14e-07
Identity = 30/67 (44.78%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKYDIIAEVLVNIPLEITTEDAEYLAKL 60
           E+FKVE     VL QIH SYNN+R   K    D    I E   NIP  +  +D EYL  L
Sbjct: 348 ERFKVEDQMKFVLGQIHRSYNNYRHYLKHWCYDTCKTIEEARANIPPNVNKDDWEYLVNL 407

Query: 61  WKLVEYQ 67
           W    YQ
Sbjct: 408 WSTPSYQ 414

[Close]

BLAST of Chy11G192150 vs. NCBI nr
Match: KAF3956246.1 (hypothetical protein CMV_018610 [Castanea mollissima])

HSP 1 Score: 55.8 bits (133), Expect = 5.83e-07
Identity = 29/67 (43.28%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 1   EQFKVEGHEASVLLQIHHSYNNWRDSSKKKWLDKY-DIIAEVLVNIPLEITTEDAEYLAK 60
           E FKVEG E  V  Q+  SY+N+RDS KKKW   Y + I E   N+P  +  +D   L  
Sbjct: 306 EYFKVEGREQEVWRQMGSSYSNYRDSLKKKWFKPYGEAIEEARGNVPPGLEKDDWNCLVD 365

Query: 61  LWKLVEY 66
           LW   +Y
Sbjct: 366 LWSQKDY 372

The following BLAST results are available for this feature:

BLAST of Chy11G192150 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G192150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P6FWK4	1.0e-04	44.78	myosin-J heavy chain-like isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC10741257...	[more]
A0A6P3ZDQ9	1.0e-04	44.78	myosin-J heavy chain-like isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC10741257...	[more]
A0A6P6FXG3	1.0e-04	44.78	myosin-J heavy chain-like isoform X3 OS=Ziziphus jujuba OX=326968 GN=LOC10741257...	[more]

BLAST of Chy11G192150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875771.1	7.34e-18	73.58	uncharacterized protein LOC120068141 [Benincasa hispida]	[more]
XP_024926361.1	3.14e-07	44.78	myosin-J heavy chain-like isoform X3 [Ziziphus jujuba]	[more]
XP_015875860.1	3.14e-07	44.78	myosin-J heavy chain-like isoform X2 [Ziziphus jujuba]	[more]
XP_024926358.1	3.14e-07	44.78	myosin-J heavy chain-like isoform X1 [Ziziphus jujuba] >XP_024926359.1 myosin-J ...	[more]
KAF3956246.1	5.83e-07	43.28	hypothetical protein CMV_018610 [Castanea mollissima]	[more]

BLAST of Chy11G192150 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G192150.1	Chy11G192150.1	mRNA