Chy11G192060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G192060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 7390315 .. 7391094 (+)
RNA-Seq Expression	Chy11G192060
Synteny	Chy11G192060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCCATCCTCCTCTTCACTTCCTCCTGTTCGTGGTTGTCAAATGAAAACCATTCCAACTCAACACCTCTATGAGCGTTTCTGTCGTCTTGGTGACCTTGATAACTGTGTTTCGCCCTCTGTTTCTAGTGTTCCTTTTGGTCTAGCTTCCTCCAAACCTATGCATGCCCCTAATGAACTTCCTATGGTCTCTCTACAACTTCGAGGTCCACTGGGTCAGAATCTCCCCATTCCTCCATATTAGGTACCTAAACCTTCATCTTCTTTTCTGTCCCTGGTTCAAGGGTTTCTATTGAAATTGTTCTAGTCGACTTTGATTCCAATTCCTTTGATGAAGATGATTCTGTTGTTTTATCTAAGTTATTCAGTCATTTTTGCCAGACTGGAACCTGTGACCGCCCTTCTTCCTCTGTTTATGTTCCCAGTTCTTTCGTTACTCCCTCGTCTCCCTCTATCAATGTGGCTGTGTCCAAATCCCTCTACCATCCCCCATGTTGACAATGTTGTTGACTTGAACACTGTACCTCCCTTATCGAATCCTTCTCCATCACAAGACCCTCCCATTTCTGACAATCTGGGTCCTCGTTCTCCTGAGGTGCCTGTGGATATCCTTGTTAATCCTTATTTTGCTGATTCCCCATTGAGTTCTTCTGTTGATCCTCCTGCTTTTACCAAGCCTCCTCCAATTTCTTCCGAATCTCTCTTGTTGGAACTACAGAGTCCTCTCTTGGTCTTAAACTTTCGCGTCATCTCCCCGTTAAAGGTTAGCATGTGA

mRNA sequence

ATGGCTTCCCCATCCTCCTCTTCACTTCCTCCTGTTCGTGGTTGTCAAATGAAAACCATTCCAACTCAACACCTCTATGAGCGTTTCTGTCGTCTTGGTGACCTTGATAACTGTGTTTCGCCCTCTGTTTCTAGTGTTCCTTTTGGTCTAGCTTCCTCCAAACCTATGCATGCCCCTAATGAACTTCCTATGGTCTCTCTACAACTTCGAGGTCCACTGGTCATTTTTGCCAGACTGGAACCTGTGACCGCCCTTCTTCCTCTGTTTATGTTCCCAGTTCTTTCGTTACTCCCTCGTCTCCCTCTATCAATGTGGCTGTGTCCAAATCCCTCTACCATCCCCCATGTTGACAATGTTGTTGACTTGAACACTGTACCTCCCTTATCGAATCCTTCTCCATCACAAGACCCTCCCATTTCTGACAATCTGGGTCCTCGTTCTCCTGAGGTGCCTGTGGATATCCTTGTTAATCCTTATTTTGCTGATTCCCCATTGAGTTCTTCTGTTGATCCTCCTGCTTTTACCAAGCCTCCTCCAATTTCTTCCGAATCTCTCTTGTTGGAACTACAGAGTCCTCTCTTGGTCTTAAACTTTCGCGTCATCTCCCCGTTAAAGGTTAGCATGTGA

Coding sequence (CDS)

ATGGCTTCCCCATCCTCCTCTTCACTTCCTCCTGTTCGTGGTTGTCAAATGAAAACCATTCCAACTCAACACCTCTATGAGCGTTTCTGTCGTCTTGGTGACCTTGATAACTGTGTTTCGCCCTCTGTTTCTAGTGTTCCTTTTGGTCTAGCTTCCTCCAAACCTATGCATGCCCCTAATGAACTTCCTATGGTCTCTCTACAACTTCGAGGTCCACTGGTCATTTTTGCCAGACTGGAACCTGTGACCGCCCTTCTTCCTCTGTTTATGTTCCCAGTTCTTTCGTTACTCCCTCGTCTCCCTCTATCAATGTGGCTGTGTCCAAATCCCTCTACCATCCCCCATGTTGACAATGTTGTTGACTTGAACACTGTACCTCCCTTATCGAATCCTTCTCCATCACAAGACCCTCCCATTTCTGACAATCTGGGTCCTCGTTCTCCTGAGGTGCCTGTGGATATCCTTGTTAATCCTTATTTTGCTGATTCCCCATTGAGTTCTTCTGTTGATCCTCCTGCTTTTACCAAGCCTCCTCCAATTTCTTCCGAATCTCTCTTGTTGGAACTACAGAGTCCTCTCTTGGTCTTAAACTTTCGCGTCATCTCCCCGTTAAAGGTTAGCATGTGA

Protein sequence

MASPSSSSLPPVRGCQMKTIPTQHLYERFCRLGDLDNCVSPSVSSVPFGLASSKPMHAPNELPMVSLQLRGPLVIFARLEPVTALLPLFMFPVLSLLPRLPLSMWLCPNPSTIPHVDNVVDLNTVPPLSNPSPSQDPPISDNLGPRSPEVPVDILVNPYFADSPLSSSVDPPAFTKPPPISSESLLLELQSPLLVLNFRVISPLKVSM*

Homology

The following BLAST results are available for this feature:

BLAST of Chy11G192060 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G192060 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G192060 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G192060 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G192060.1	Chy11G192060.1	mRNA