Chy11G191590 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G191590
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein LAX PANICLE 2-like
Location	chrH11: 6622743 .. 6627985 (+)
RNA-Seq Expression	Chy11G191590
Synteny	Chy11G191590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTAAGATCCACAGAGAAGAAACAACTACAAAAACAAGAAAAAGAAGATGAAAAAAGATCGAGACTCTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATAAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAACAGGGCCTAATAATAAAAGTAATTATTACTATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTCTCTTCACCCAACAGGTCAAACTTATGAACTCTTTTCTTCTCCTTCTTTTTCCTTGATCTATCATCTTCAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAACAGCTTTGATTTTCTTTCCCCAATGAAACAAATTTTTTTATAAAAAAAATTAATTGTAGAGTTTTTTTTTTGTTACAACATAAATAAATAACCAATGAATATTTATATTGTTATAGAACAGTTGATTAAACTTCTTTTTTTTTTTTTTTTTAATTTCGAAATCGATAGAACGTATTTTGATGTATTATGAAGTTTTTTTAGGTAAATATAAGATTATTGTAATTATTAATATAATTTGAATTTGAAATGTGGTAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGTAAGTGACAACATTCAAAACACACTATCAAATCATACAAACTTTTCAAATTTTCCAGTTTTTTGTGTACTGATTGTTGTTTTTATTTTTAAAACCTTTCTTAAATATTATAGAATATATATATCAAAGATGCAAGCGTAATTATCTACATAAGTTGACAATTTAAATGTTGATTGAAATGGTTTTGAGTGGGTAAAGTACTCTTGTTTAAAAAGACATATTTTCAGAAATTTAAAATTAAATAATGATTTCTTTTCATAAAAAACAAATAAACATTACAACCAATTCATTAAAACTCAAAACTAATTAATTTTTATATCCATTTAAACTCTCTTGAACTTACCTAATGAAATCAGTCTAGACTACTTTTTCTTTTTTTTGAGATTTAATTTATAGTTCATCTTCACATGATTATATTTAAGATTACCTCAAAATCACCACAATACCATTATTTTTCTCTTAAAAGTCCTCCAAAATAGTAAAATATATTGTCACGTAATTCTTTTTTTAAAAGAAGTATATGAAAAAATAGTGAAAATGAAAAGTTGAACAGTTCACTCAGATATTACATTATAGCAAAGTTGTTACTATTAATATAGCTGATAGCAATTTTCTCTGCTTTACATTACTGATCAAAAGAACTAGAGTTGGAGGGTATATAGTTTTTTTTTTAAATGTGATTTTTTATTAAAAGAAATAATAAAGTTTGACCTGAGGAGTAAAACTAGAGTTGATGGGATTACAAATAATAATAATAATATATTTGGTGTATGTATTTGGTCTGAAATCAAATGATGAGAGGATGCAGTGAGAAAAGGAAAGCTGAGTTATGGATTTTGGTGAAAAACTGTTTAGGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGCTGGGTCTCTCCAATCAAGCTGAGGTAACAAGACGCAAAACTATCTCACTATTTCCTTCAAATAAACTTAAAGAAAAAGAAAAGATTATTACTGTCACATATTTCCTAAATTGTCCAATTATAATTATCACGTTCAATTTGTCTAGTATGTACTTTATGAGATTGGGAGAGATAAATGAAAGATTGGTGGATCTTGAAATTCATTCAAAACTTTATTCTTAAATCATACATTATTATATCTTTTATATTCATGATGCTCTCTAATTTTCTTTTTATTGAAATGCCTACTCTAGCCTTTCTTTTATTTTATGGAAATGTCTTTTATGAAAAAATGATGATGAACAATGTGAAAAAGGTAATACACATTAAATTTTGATTGACATGTCAATACTTTTATTAATATTTACACATTTTTGTTGATTCAATATTTGTAAACCAATATTTTTATCATATGGTAGAAAAATCTACAAAAAAAATAATCATCAAAATGTGATTGATACAAAATATATTATAAATAATAAGGTAAGTTTATTGATTTAAAAATATTAAATATTTATTTATTAATTTAAATTTATTTTTATAATTTTGTTTAAAATATCCTTCAAAATCTATATTTGTGTGAAAATCAAAATTACACCTTGATATTTTTTAAACCTTTTGAGTGCAACTTAGATCAGATGTAACATTTTCAATTACAAATGAATAGTTCTTTAAAAAAAAAATCTAAAATAAAATTTTGTAATTAGATTGTACACAGAGAGTGAGCTGTGATACATCACAGTATTTATCATATGTAAAATGTTTTCATATATTAAAAAAAATCATCTAGTACTCTTGTTCAAAAGTAAACATGCATGGCTTAAAAGTGATTAATTAATTCCGTGTCTATTACTAGTTTTTTTTAATATTCATTCTCTCTCTAATAATTACAAAGTCAGAAGTAGTTTTGAAAAAATAAATTAAGAGATGAAGCATGCATGAGATGTCTCACTCAAATGTCTTAGTGAGTGAGAGTGAGTGTGTTGGGATATGATGCATGCAAAATATTGGAAATGAATCAATAAAGAAGAGATAGAGAGAGGGTAATGATGAATTGAGGGGTTCTTTTACTTAGTTATTTATTTTATTTTCTTACTAATTTTTAAAGTTCTCTTGGTTTTGTGAAGGTTGAATTATGGTGCATGGGAGAGAGACTGTTGCATACTCAATCACTAAAGCAAGTGAGAGATGGAATTTGGCTGCCTAAGTTGGTGGAATTTGTTAATTCAAACTCATCATTATCAAATTCTTCAATATTATTTCATCCACAAAATCAAACTCCTTTTTCTTCTTCTAATACTTATCTTATGTCTTTGCATTATGGAAGAGCAAGATTCTTCTAACTAAATATATATTTATGTATGTATATATACACAATGACACCTCTTCCCTTTGTATCTCTCTCTCTATTTATCATATATATATATACTTAAGCTTGAACTTGAAATTCGTTTGAACTCAAATATAGATCTTTTGGTTATTTACTTATGTTTATGATTTCAACGCATCAATATAAATATAAAGAGTGCACCATTTTATTTTTCGAAAGACAAGTCGACAGGTAATATTATCATTAATTTGTGATTATAAATTAATAATAGTTAGGAAAATTTGCATCTTTTATCCCCATGAGGTTTAAATTATACTCTTTCCCTCAGAAAAATGAACTACCATAACACCTTACTCTAGTCCGAATTGGAAGGGTAGAAAGAAAAATAATGTCATAAATGTGTCAAAATTTGCAATTTTGACGAAAAAATCAATGTTTCCGGATTTCACTTTTTTGTGACACCTTTTTATTGTTTTGTTGTAAATACATGAAATATAATTAAATAAGGAGGTTTTTAAGAAAATATAACAAAACGATAAACGCTCACATGTCCACAATAAAAAATATCAAAACTTTCTCAGTCAGCAAGAGATTAATTGGTCACATGCGCAGATGTAATTTTTCTTCTAAACGCTTACGATTATATGCGATCGTGTAGTAAATGATACATGAACGTGTAGGTAGTATTTATAAGAGATCAAGCATCTCAAAATCAAATTGGATTAATCAAATTACCACAAAATTTGAATAATTTACATTGACATAAATCTTGCGCAAATTCACCATGATTAATTAATTGTTCATTGCCTTCCCTATCTTATATTACCATATCATTATATGATCTTGAATAGAAAATATGACCCTTGCTCAATTTTCCTTTTTGACCTCCACAATTTTATTTTTTCCATCATAAATTTATTCTTTCATGTATGTAGCACAAGCTAACCTTATTCACCTTTGTGTACAAATATTCATTATGTGTTTATAAATAAAATCATCACGGATATTATTTTCTCTTTTGATTGAGGTTTTAGTTTCTTTATGGTATCAGAGCATATTGTTGTGCTCATAGAAAAAAACTTGCCTCAAAAAATTGAAAATTCTTTTTCGTGGCCATGAAAGAAAAAGCTCACAATTCAATATTTCCATCAGTCAAACTAGTCTTATTTCAATCAAACTCAACACTGAAATTTATCTCTTATGGAAATCCCAAGTGCTACCATTAATTAAGAGTATGAACACCATCTCACAGAAGAAAAGAAATATGATGATGAAGCTACTAACAAGGAAGAAAACTCCAAAGATTATTCTAGTCGTGCAGTTTGGATCACAAATGATGGGCTTCTTATCTCTTGGTTGTTGGGGATAATCTCATAAGATGTTTTCAACATGATAGAAGGATCAGAGACGACATTTCAGGTTTGGAAATCATTAGAAAATCAAATGCTTACAATGACAAAAGAAAGTGAAATCCATGTAAGTGAAACTCTTCTCACATTGAAGAAGGGATCCTCAACTCTTGATAAAAATTTTAAAAAATTTAAATACCTCTATGATAAACTAGCTACTATGAGAAACCACTTGATAATGTTACTAAAGTATTTCATCTTGCTAGAGGCTTAGGATCTTGATACCAAGGTTTTCGCATAGCAATATTATCAAAACCACCATATCCCTCTTATAACCAATTTGTTGTGGCTCTTAAAGCACACCACAAAATGTTGTCTAATGAACTTGAAGAAGAAAATTTTGGACAAATATATCATGCCCAAGCTTTTTACAGCCAAAGAGATTGCAGTAGAGAACATGGGAGACAATTCTCTTCTCGTGGAAGAGGTTTTCCTCAAAGCAGATTTCAAGAAAATACAAGCTTCAAGCAAGCATCAAAATCAACCTTGAGTCCACGCAAGGAAGTAAAATCAGATGGACAACAAACTCCTATTTCACAAGATCATAATCAGGTAGTATGTCAAATTTGTGACAAAGCTAACCATGTGGCTATTGATTCTTGGAATAGGTACAATCACTCTTATCAGTCTAATGATATACCAAAGGCTTTTGCTGTTATGAATTTGATGGAGGAACCCAACTCCACCATCTATGCAGATTCAGAAGCCTTGGCACATATCATAACCAATACTGGTAATTTGAGTAACTTGCAAACCTATTTAGGTAAAGATAAAGTATATATATTGGAAATGGTAAAAGTCTTCAAATTACACACATTG

mRNA sequence

ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTAAGATCCACAGAGAAGAAACAACTACAAAAACAAGAAAAAGAAGATGAAAAAAGATCGAGACTCTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATAAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAACAGGGCCTAATAATAAAAGTAATTATTACTATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGCTGGGTCTCTCCAATCAAGCTGAGATTATTACTGTCACATATTTCCTAAATTCTTCAAGCAAGCATCAAAATCAACCTTGAGTCCACGCAAGGAAGTAAAATCAGATGGACAACAAACTCCTATTTCACAAGATCATAATCAGGTAGTATGTCAAATTTGTGACAAAGCTAACCATGTGGCTATTGATTCTTGGAATAGGTACAATCACTCTTATCAGTCTAATGATATACCAAAGGCTTTTGCTGTTATGAATTTGATGGAGGAACCCAACTCCACCATCTATGCAGATTCAGAAGCCTTGGCACATATCATAACCAATACTGGTAATTTGAGTAACTTGCAAACCTATTTAGGTAAAGATAAAGTATATATATTGGAAATGGTAAAAGTCTTCAAATTACACACATTG

Coding sequence (CDS)

ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTAAGATCCACAGAGAAGAAACAACTACAAAAACAAGAAAAAGAAGATGAAAAAAGATCGAGACTCTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATAAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAACAGGGCCTAATAATAAAAGTAATTATTACTATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGCTGGGTCTCTCCAATCAAGCTGAGATTATTACTGTCACATATTTCCTAAATTCTTCAAGCAAGCATCAAAATCAACCTTGAGTCCACGCAAGGAAGTAAAATCAGATGGACAACAAACTCCTATTTCACAAGATCATAATCAGGTAGTATGTCAAATTTGTGACAAAGCTAACCATGTGGCTATTGATTCTTGGAATAGGTACAATCACTCTTATCAGTCTAATGATATACCAAAGGCTTTTGCTGTTATGAATTTGATGGAGGAACCCAACTCCACCATCTATGCAGATTCAGAAGCCTTGGCACATATCATAACCAATACTGGTAATTTGAGTAACTTGCAAACCTATTTAGGTAAAGATAAAGTATATATATTGGAAATGGTAAAAGTCTTCAAATTACACACATTG

Protein sequence

MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITVTYFLNSSSKHQNQP*VHARK*NQMDNKLLFHKIIIR*YVKFVTKLTMWLLILGIGTITLISLMIYQRLLLL*I*WRNPTPPSMQIQKPWHIS*PILVI*VTCKPI*VKIKYIYWKW*KSSNYTHX

Homology

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BLAST of Chy11G191590 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.1e-08
Identity = 26/61 (42.62%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 97  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE 156
           S +  +AG+WF L ++P +     LPQIP+ Y+R+KD ++TV ++ KYL+ KLGL +++E
Sbjct: 279 SAVAAAAGVWFVLQAAPLQGREPFLPQIPRSYLRIKDGRVTVRLLTKYLVNKLGLEDESE 338

Query: 157 I 158
           +
Sbjct: 339 V 339

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BLAST of Chy11G191590 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 105 LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI-IT---- 164
           +WFSL++S N++G A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ E+ IT    
Sbjct: 310 VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMGE 369

Query: 165 -----------VTYFLNSSSKHQ 172
                      V  +L ++SKHQ
Sbjct: 370 PVIPTLQLHSLVDLWLETTSKHQ 392

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BLAST of Chy11G191590 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 5.3e-07
Identity = 24/53 (45.28%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 105 LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
           +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ EI
Sbjct: 311 VWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEI 363

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BLAST of Chy11G191590 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.5e-04
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 101 NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
           N+  +WFSL  S  +     LP I    IRVKD  MTV  +KKYL+ KLGL ++ ++
Sbjct: 361 NNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQV 417

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BLAST of Chy11G191590 vs. ExPASy TrEMBL
Match: A0A0A0LR47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423670 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-50
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDL 60
           MGSSSTQEWLELSLGL ST K+QLQKQEKEDEKRSRLYQEKLV+CGTTSH+ESEYVNLDL
Sbjct: 1   MGSSSTQEWLELSLGLGSTGKEQLQKQEKEDEKRSRLYQEKLVICGTTSHEESEYVNLDL 60

Query: 61  RLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNR 116
           RLQ GPNNKSNY  MGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNR
Sbjct: 61  RLQIGPNNKSNYCNMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNR 115

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BLAST of Chy11G191590 vs. ExPASy TrEMBL
Match: A0A6J1F0B3 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-29
Identity = 91/168 (54.17%), Postives = 104/168 (61.90%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDL 60
           MGS  ++EWLELSLGLR T+KKQ + +++EDE                  +E E  +L L
Sbjct: 1   MGSPGSKEWLELSLGLRGTKKKQEEAKKEEDE--------------MNLGEEGEGSSLSL 60

Query: 61  RLQTGPNNKSNYYYMGIRDFMLQHQSKK-----------KHFHSDYSSIITNSAGLWFSL 120
           RLQ GP  K     MGI  FM    ++K            HFH   S    N AGLWFSL
Sbjct: 61  RLQIGP--KCFDTNMGIMGFMSTQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFSL 120

Query: 121 LSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
            SSPNRKGGA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAE+
Sbjct: 121 RSSPNRKGGAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEV 152

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BLAST of Chy11G191590 vs. ExPASy TrEMBL
Match: A0A7J7C0I8 (General transcription factor IIH subunit 3 isoform X2 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW22G01329 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-12
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 97  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE 156
           SII  ++G WF+L SS NR+ G  LPQIPK YIRVKDE +++LMVKKYL+TKLGLSNQAE
Sbjct: 371 SIIYPASGFWFALRSSTNRE-GLRLPQIPKAYIRVKDESVSILMVKKYLVTKLGLSNQAE 430

Query: 157 I 158
           I
Sbjct: 431 I 430

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BLAST of Chy11G191590 vs. ExPASy TrEMBL
Match: A0A6P5MK19 (uncharacterized protein LOC110274740 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC110274740 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-12
Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 101 NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV 160
           N  GLWF+L SS NR+ G ALPQIPK YIR++DE MTV MVKKYL+ KLGLSN+AEI T+
Sbjct: 172 NKCGLWFTLRSSTNRR-GEALPQIPKAYIRIRDENMTVFMVKKYLVRKLGLSNEAEIQTL 230

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BLAST of Chy11G191590 vs. ExPASy TrEMBL
Match: A0A2I4DPI0 (uncharacterized protein LOC108982202 OS=Juglans regia OX=51240 GN=LOC108982202 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.3e-12
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 103 AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
           +GLWFSL SS NR  G ALPQIPK YIRVKDE +TV MVKKYL+TKLGLSN+AEI
Sbjct: 171 SGLWFSLRSSTNR-DGEALPQIPKAYIRVKDENVTVFMVKKYLVTKLGLSNEAEI 224

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BLAST of Chy11G191590 vs. NCBI nr
Match: KAE8652308.1 (hypothetical protein Csa_022227 [Cucumis sativus])

HSP 1 Score: 285 bits (729), Expect = 2.01e-92
Identity = 150/165 (90.91%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDL 60
           MGSSSTQEWLELSLGL ST K+QLQKQEKEDEKRSRLYQEKLV+CGTTSH+ESEYVNLDL
Sbjct: 1   MGSSSTQEWLELSLGLGSTGKEQLQKQEKEDEKRSRLYQEKLVICGTTSHEESEYVNLDL 60

Query: 61  RLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAA 120
           RLQ GPNNKSNY  MGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAA
Sbjct: 61  RLQIGPNNKSNYCNMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAA 120

Query: 121 LPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITVTYFLN 165
           LPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE+      LN
Sbjct: 121 LPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAELDYFKSILN 165

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BLAST of Chy11G191590 vs. NCBI nr
Match: KAG6571319.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138 bits (348), Expect = 5.15e-36
Identity = 91/171 (53.22%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDL 60
           MGS  ++EWLELSLGLR T+KKQ + +++EDE                  +E E  +L L
Sbjct: 1   MGSPGSKEWLELSLGLRGTKKKQEEAKKEEDE--------------MNLDEEGEGSSLSL 60

Query: 61  RLQTGPNNKSNYYY---MGIRDFMLQHQSKK-----------KHFHSDYSSIITNSAGLW 120
           RLQ GP      Y+   MGI  FM    ++K            HFH   S    N AGLW
Sbjct: 61  RLQIGPK-----YFDTNMGIMGFMSTQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLW 120

Query: 121 FSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 157
           FSL SSPNRKGGA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAE+
Sbjct: 121 FSLRSSPNRKGGAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEV 152

[Close]

BLAST of Chy11G191590 vs. NCBI nr
Match: XP_022931988.1 (protein LAX PANICLE 2-like [Cucurbita moschata])

HSP 1 Score: 138 bits (347), Expect = 7.25e-36
Identity = 91/168 (54.17%), Postives = 104/168 (61.90%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDL 60
           MGS  ++EWLELSLGLR T+KKQ + +++EDE                  +E E  +L L
Sbjct: 1   MGSPGSKEWLELSLGLRGTKKKQEEAKKEEDE--------------MNLGEEGEGSSLSL 60

Query: 61  RLQTGPNNKSNYYYMGIRDFMLQHQSKK-----------KHFHSDYSSIITNSAGLWFSL 120
           RLQ GP  K     MGI  FM    ++K            HFH   S    N AGLWFSL
Sbjct: 61  RLQIGP--KCFDTNMGIMGFMSTQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFSL 120

Query: 121 LSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 157
            SSPNRKGGA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAE+
Sbjct: 121 RSSPNRKGGAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEV 152

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BLAST of Chy11G191590 vs. NCBI nr
Match: XP_017971271.1 (PREDICTED: uncharacterized protein LOC18612903 isoform X3 [Theobroma cacao])

HSP 1 Score: 85.5 bits (210), Expect = 1.59e-15
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 94  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSN 153
           DY +     +GLWF+L S  NR+ G ALPQIPK YIRVKDE +T+ MVKKYL+TKLGLSN
Sbjct: 160 DYLAGTRPHSGLWFTLQSYTNRRNGEALPQIPKAYIRVKDENVTIFMVKKYLVTKLGLSN 219

Query: 154 QAEI 157
           +AE+
Sbjct: 220 EAEV 223

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BLAST of Chy11G191590 vs. NCBI nr
Match: XP_020965814.1 (uncharacterized protein LOC110266143 isoform X2 [Arachis ipaensis])

HSP 1 Score: 85.5 bits (210), Expect = 1.98e-15
Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 94  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSN 153
           D  S   N  GLWF+L SS NR+G  ALPQIPK YIR++DE MTV MVKKYL+TKLGLSN
Sbjct: 144 DGDSHDYNKCGLWFTLRSSTNRRG-EALPQIPKAYIRIRDENMTVFMVKKYLVTKLGLSN 203

Query: 154 QAEIITV 160
           +AEI T+
Sbjct: 204 EAEIQTL 209

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BLAST of Chy11G191590 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 )

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 105 LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI-IT---- 164
           +WFSL++S N++G A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ E+ IT    
Sbjct: 310 VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMGE 369

Query: 165 -----------VTYFLNSSSKHQ 172
                      V  +L ++SKHQ
Sbjct: 370 PVIPTLQLHSLVDLWLETTSKHQ 392

[Close]

BLAST of Chy11G191590 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 26/58 (44.83%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 103 AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV 161
           +G+WF L +S N+     LPQIPK Y+R+KD KMTV ++ KYL+ KL L ++++ + +
Sbjct: 274 SGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEI 331

[Close]

BLAST of Chy11G191590 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 24/53 (45.28%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 105 LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
           +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ EI
Sbjct: 311 VWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEI 363

[Close]

BLAST of Chy11G191590 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 24/53 (45.28%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 105 LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
           +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ EI
Sbjct: 197 VWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEI 249

[Close]

BLAST of Chy11G191590 vs. TAIR 10
Match: AT1G28080.1 (RING finger protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06
Identity = 23/55 (41.82%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 103 AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI 158
           +GLWF L +S  ++    LPQ+ K Y+R+KD ++TV ++ KYL+ KL L +++E+
Sbjct: 235 SGLWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEV 289

The following BLAST results are available for this feature:

BLAST of Chy11G191590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G3XKQ9	8.1e-08	42.62	Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1	[more]
Q94AY3	3.1e-07	38.55	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 ...	[more]
Q9M9Y4	5.3e-07	45.28	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 ...	[more]
Q9LS86	5.5e-04	43.86	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of Chy11G191590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR47	2.4e-50	93.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423670 PE=4 SV=1	[more]
A0A6J1F0B3	1.8e-29	54.17	protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV...	[more]
A0A7J7C0I8	2.5e-12	70.49	General transcription factor IIH subunit 3 isoform X2 OS=Tripterygium wilfordii ...	[more]
A0A6P5MK19	2.5e-12	70.00	uncharacterized protein LOC110274740 isoform X2 OS=Arachis duranensis OX=130453 ...	[more]
A0A2I4DPI0	3.3e-12	78.18	uncharacterized protein LOC108982202 OS=Juglans regia OX=51240 GN=LOC108982202 P...	[more]

BLAST of Chy11G191590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652308.1	2.01e-92	90.91	hypothetical protein Csa_022227 [Cucumis sativus]	[more]
KAG6571319.1	5.15e-36	53.22	Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022931988.1	7.25e-36	54.17	protein LAX PANICLE 2-like [Cucurbita moschata]	[more]
XP_017971271.1	1.59e-15	64.06	PREDICTED: uncharacterized protein LOC18612903 isoform X3 [Theobroma cacao]	[more]
XP_020965814.1	1.98e-15	67.16	uncharacterized protein LOC110266143 isoform X2 [Arachis ipaensis]	[more]

BLAST of Chy11G191590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30580.1	2.2e-08	38.55	DREB2A-interacting protein 2	[more]
AT5G13250.1	2.9e-08	44.83	RING finger protein	[more]
AT1G06770.1	3.8e-08	45.28	DREB2A-interacting protein 1	[more]
AT1G06770.2	3.8e-08	45.28	DREB2A-interacting protein 1	[more]
AT1G28080.1	3.5e-06	41.82	RING finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	PANTHER	PTHR47290:SF6	SUBFAMILY NOT NAMED	coord: 95..158
IPR044171	Protein LAX PANICLE 2-like	PANTHER	PTHR47290	RING FINGER PROTEIN	coord: 95..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G191590.1	Chy11G191590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0000439	transcription factor TFIIH core complex
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding