Chy11G191010 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G191010
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transposon Tf2-12 polyprotein
Location	chrH11: 5716350 .. 5718978 (-)
RNA-Seq Expression	Chy11G191010
Synteny	Chy11G191010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTCGAGCCAAACTTCGAAGGCTTAGCCACACAGGTAACATTCTTGATTACATGAAAGAATTTACCACCCTTATGCTTGAAATTAGTGATCTACCCGAAAAGGAAGACTTATTCCAATTCAGAGACGGACTGAAGGATTGGGCTAAAGTTGAGCTAGACCGTCGTAACATCCAAACTCTCGACGATGCTATAGCAACAGCCGAGATGCTCGTTGATTATTCAGCCCAATCAAAGGGGAAAAAGCCTGGTTCGAACAAACAGGAAGGCAATCACAACAAGCATAAGGACTCCGAACAAAAAGAAAGGGGAAAGAAGGCATTCCACAACAAACATGGCAAGTATAACAATACCCAACGAGGTGAGTCATCGAAACCCTCTACTCCATGCTTTGTTTGTAATGGCCCTCATTGGACGAGAGACTGTCCAAATAGAAAAGCAATGAATGCCCTTATTGCTAAATTGCTTGAGCCAAAGCAAGGGGATATTACACCACAAATCGGACCCTTGCAACATATTGGAGCTCAAAACAAGGCTAATGAAACAAACAAAGGAGTCCTACTCCATGGTAATGTAAAGGTAAATGGGAGAGAGGCTGTTGCCATATTCGACACAGGTGCAAGCCACAACTTTATGAATGTGCATGAGGCTAAGAGACTAGGCCTCAATTTTGCGAACGAGAAAGGGACTGTGAAGGAAGTAAACTCGAAGCCAAGGCCATTGAAGGAGTAGCAAGAGGCGTGACAGTCAAGATCGAAGACTGGCAAGGTAAGCTTGACTTCACTGTGCTACCCATGGATGATTTTGATATTGTACTTGGCCTAGGATTCTTCGATCGGGTAATTGCCATTGTTGACTCTTCTGGATGCACTCTCACTATAGTAGATGGTAAAATAACGACCATCCCACTAAAGAAAGGGAAGCCAGTAACCATGCTGTCAGCCATACAAAACAAGAAAGGAGTCACTAAAACTGAATGTCATGCAGTTACCCCAAAAGAGATGCAATCAGAGGAGACAGGTTCTAAAACTATAGTCCCAGAAGTACACGAAGTCCTTGAGGAAAATAAGGACGTTATGACTACTGGGTTGCCAAGAAAAGGGGACCGAGAGATCGAGGCAAAACCAGGCAACTCCAATGCAGTCGATGATGCCGTAAGCCAGAAAACAGAACTTGCTGCTATAGCAACAAGCATGCCTAGAAGTGACTTCCTTGACAAAATCAAGGAAGGAATTAAGAATGATGCAACAACTAGGAACTTATTGAAGATGGCCAAGAAGGGAAAGACCAGACGCTTTTGGGAGAGTAATGGTACCTCTTGGCGATCGAAAACCGATTATTCGTGCCACGATGGGGATCCTTGAGGAAGGATATCTTAAAGGAGTGTCATGATTTTTTATGGGCCGAACATCCAGGTATGAACTGAACTTTTGCCCTAATTCATGACAAGTATTATTGGCCGAAAATGCAAGATGACATTGAAGCGTATGTCAAGACTTGTCTAGTATGCCAACAAGATAAAGGGGAACAACAACTTCCAGCGGGGTTACTTGAACCACTACCCATCGCGGAAAGACCTTGGGATAGTGTTACAATGGACTTTATTGTAGCATTACCTAAGTCAAAGGGGCTTGGAAGCATAATGGTAGTTGTGGACAGATTCAGCAAATATGCAACATTTATTCCATGTCCACTAGATGTGAAAGTTGACGAAGTTGCCAAGTTGTTCTTAAAAAATGTGGTAAAGTTATGGGGAATATCTAAAAACATCATCAATGATCGAGACCCCCGTTTCACAGGCAAGTTTTGGCGAGAACTCTTTAAACTCATGGGAACATATTTGAACTTCTCTACTAATTTCCATCCCCAGAGTGACGGCCAAACAGAGCGGATAAATGCCTTGTTGGAGCATTACTTAAGGCATTACGTCAGTGCTAACCAGAAGGATTGGGCAACCCTCATTGACATAGCCCAATTCTCTTATAATCTTCAAAGGAGTGAAGCTACAGGAAAGAGCCCCTTTGAGATAGTCATGAATCCACAACCCAACACTCCTAATGCCTTAATTACTCCATACAAAGGACCCAATCCTACAGCGTATAAGTTCGCGAAAGAGTGGCACGAAGAATGCGACATATCAAGGGCATGCTTGGCAAAGGCCGCCACAAAGATGAAAAAGTGGGCGGATCGGAAAAGGAGGCCCAAAGAGTACCAAGTAGGAGAAAAAGTAATGGTAAAGCTACTACCTAACCAGTTTAAATCCCTATGTAAGGTACATAAGGGCTTAATCCGAAGATACGAAGGCCCCTTCTCTGTCATTGAGAGAGTGGGGAAAGCAGCCTACAGACTGAAGATCCATAATGTCTTCCATGTGAGCATGTTAAAGCCCTTTTATGAAGACAAAGAGGATCCAAGCATAAGTGAGTCCTCTCGTGCACCCACCGGCATGATCTCAGAATTCAACATGAAAATCAAAGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGGAGTTCCCAGTTATAACGAATACTTGATCGCTTGGGAAGGACTACCGGAGAGCGAAGCTAGTTGGGAGAAGGAAGACACCATATGGCAATTTCAAGATGAAATCAGAAGATTTAAA

mRNA sequence

ATGGAGTCTCGAGCCAAACTTCGAAGGCTTAGCCACACAGGTAACATTCTTGATTACATGAAAGAATTTACCACCCTTATGCTTGAAATTAGTGATCTACCCGAAAAGGAAGACTTATTCCAATTCAGAGACGGACTGAAGGATTGGGCTAAAGCCGCCACAAAGATGAAAAAGTGGGCGGATCGGAAAAGGAGGCCCAAAGAGTACCAAGTAGGAGAAAAAGTAATGGTAAAGCTACTACCTAACCAGTTTAAATCCCTATGTAAGGTACATAAGGGCTTAATCCGAAGATACGAAGGCCCCTTCTCTGTCATTGAGAGAGTGGGGAAAGCAGCCTACAGACTGAAGATCCATAATGTCTTCCATGTGAGCATGTTAAAGCCCTTTTATGAAGACAAAGAGGATCCAAGCATAAGTGAGTCCTCTCGTGCACCCACCGGCATGATCTCAGAATTCAACATGAAAATCAAAGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGGAGTTCCCAGTTATAACGAATACTTGATCGCTTGGGAAGGACTACCGGAGAGCGAAGCTAGTTGGGAGAAGGAAGACACCATATGGCAATTTCAAGATGAAATCAGAAGATTTAAA

Coding sequence (CDS)

ATGGAGTCTCGAGCCAAACTTCGAAGGCTTAGCCACACAGGTAACATTCTTGATTACATGAAAGAATTTACCACCCTTATGCTTGAAATTAGTGATCTACCCGAAAAGGAAGACTTATTCCAATTCAGAGACGGACTGAAGGATTGGGCTAAAGCCGCCACAAAGATGAAAAAGTGGGCGGATCGGAAAAGGAGGCCCAAAGAGTACCAAGTAGGAGAAAAAGTAATGGTAAAGCTACTACCTAACCAGTTTAAATCCCTATGTAAGGTACATAAGGGCTTAATCCGAAGATACGAAGGCCCCTTCTCTGTCATTGAGAGAGTGGGGAAAGCAGCCTACAGACTGAAGATCCATAATGTCTTCCATGTGAGCATGTTAAAGCCCTTTTATGAAGACAAAGAGGATCCAAGCATAAGTGAGTCCTCTCGTGCACCCACCGGCATGATCTCAGAATTCAACATGAAAATCAAAGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGGAGTTCCCAGTTATAACGAATACTTGATCGCTTGGGAAGGACTACCGGAGAGCGAAGCTAGTTGGGAGAAGGAAGACACCATATGGCAATTTCAAGATGAAATCAGAAGATTTAAA

Protein sequence

MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAYRLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

Homology

[Close]

BLAST of Chy11G191010 vs. ExPASy TrEMBL
Match: A0A5D3BX70 (Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00030 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67
Identity = 126/163 (77.30%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 51  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGK 110
           KAA +MKKWAD+KRRPKEY++GEKV+VKLLPNQFKSL KVHKGL+RRY+GPFS+IERVGK
Sbjct: 42  KAAQRMKKWADKKRRPKEYEIGEKVLVKLLPNQFKSLRKVHKGLVRRYKGPFSIIERVGK 101

Query: 111 AAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERK 170
           AAY      +LKIHNVFHVSMLKPF+ED+EDP+ SE+SRAPTG+++EF+ KIKEIL ERK
Sbjct: 102 AAYKVELPQKLKIHNVFHVSMLKPFHEDQEDPNRSETSRAPTGVVTEFDRKIKEILAERK 161

Query: 171 IRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 208
           IRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Sbjct: 162 IRRRGVPSHSEYLILWEGLPESEASWEREDVLWQFQTEIEKFK 204

[Close]

BLAST of Chy11G191010 vs. ExPASy TrEMBL
Match: A0A5A7UCY6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2143G00490 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67
Identity = 127/163 (77.91%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 51  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGK 110
           KAA +MKKWAD+KRRPKEY++G+KV+VKLLPNQFKSL KVHKGL+RRYEGPFS+IERVGK
Sbjct: 231 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 290

Query: 111 AAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERK 170
           AAY      RLKIHNVFHVSMLKPF+ED+EDP+ S++SRAPTG+I+EF+ KIKEIL ERK
Sbjct: 291 AAYKVELPPRLKIHNVFHVSMLKPFHEDREDPNRSKTSRAPTGVITEFDRKIKEILAERK 350

Query: 171 IRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 208
           IRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Sbjct: 351 IRRRGVPSHSEYLILWEGLPESEASWEREDMLWQFQAEIEKFK 393

[Close]

BLAST of Chy11G191010 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 126/163 (77.30%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 51   KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGK 110
            KAA +MKKWAD+KRRPKEY++G+KV+VKLLPNQFKSL KVHKGL+RRYEGPFS+IERVGK
Sbjct: 1382 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 1441

Query: 111  AAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERK 170
            AAY      RLKIHNVFH+SMLKPF+ED+EDP+ S++SRAPTG+I+EF+ KIKEIL ERK
Sbjct: 1442 AAYKVELPPRLKIHNVFHISMLKPFHEDREDPNRSKTSRAPTGVITEFDRKIKEILAERK 1501

Query: 171  IRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 208
            IRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Sbjct: 1502 IRRRGVPSHSEYLILWEGLPESEASWEREDMLWQFQAEIEKFK 1544

[Close]

BLAST of Chy11G191010 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-14
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1   MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK 52
           +ESR KLRRL HTG+IL+Y+KEFTTLMLEI DLPEKE LFQF+DGLKDWAK
Sbjct: 249 IESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAK 299

HSP 2 Score: 265.0 bits (676), Expect = 2.6e-67
Identity = 127/163 (77.91%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 51  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGK 110
           KAA +MKKWAD+KRRPKEY++GEKV+VKLLP+QFKSL KVHKGL+RRYEGPFS+IERVGK
Sbjct: 42  KAARRMKKWADKKRRPKEYEIGEKVLVKLLPSQFKSLRKVHKGLVRRYEGPFSIIERVGK 101

Query: 111 AAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERK 170
           AAY      RLKIHNVFHVSMLKP +ED+EDP  SE+SRAPTG+++EF+ KIKEIL ERK
Sbjct: 102 AAYKVELPQRLKIHNVFHVSMLKPSHEDQEDPKRSETSRAPTGVVTEFDRKIKEILAERK 161

Query: 171 IRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 208
           IRRRGVPSY+EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Sbjct: 162 IRRRGVPSYSEYLILWEGLPESEASWEREDVLWQFQTEIEKFK 204

[Close]

BLAST of Chy11G191010 vs. ExPASy TrEMBL
Match: A0A5A7UJ25 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002340 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.5e-67
Identity = 127/163 (77.91%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 51   KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGK 110
            KAA +MKKWAD+KRRPKEY++G+KV+VKLLPNQFKSL KVHKGL+RRYEGPFS+IERVGK
Sbjct: 1373 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 1432

Query: 111  AAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERK 170
            AAY      RLKIHNVFHVSMLKPF+ED+EDP+ S++SRAPTG+I EF+ KIKEIL ERK
Sbjct: 1433 AAYKVELPPRLKIHNVFHVSMLKPFHEDQEDPNRSKTSRAPTGVIIEFDRKIKEILAERK 1492

Query: 171  IRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 208
            IRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Sbjct: 1493 IRRRGVPSHSEYLILWEGLPESEASWEREDMLWQFQAEIEKFK 1535

[Close]

BLAST of Chy11G191010 vs. NCBI nr
Match: KAE8649329.1 (hypothetical protein Csa_015359 [Cucumis sativus])

HSP 1 Score: 372 bits (954), Expect = 5.04e-129
Identity = 191/212 (90.09%), Postives = 196/212 (92.45%), Query Frame = 0


Query: 1   MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWA 60
           MESRAKLRRL HTGNILDY+KEFTTLMLEISDLP KE LFQFRDGLKDWAKAATKMKKWA
Sbjct: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAKAATKMKKWA 60

Query: 61  DRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAYRL----- 120
           DRKRR KEYQVGEKVMVKLLPNQFKSL KVHKGLIRRYEGPFS+I+RVGKAAYRL     
Sbjct: 61  DRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLELLPR 120

Query: 121 -KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYN 180
            KIHNVFHVSMLK FYEDKEDPSISESSRAPT MISEFN KIKEILVERKIRRR VPSYN
Sbjct: 121 LKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVPSYN 180

Query: 181 EYLIAWEGLPESEASWEKEDTIWQFQDEIRRF 206
           EYLIAWEGL E+EASWEKEDT+WQFQDEIRRF
Sbjct: 181 EYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 212

[Close]

BLAST of Chy11G191010 vs. NCBI nr
Match: KAE8653146.1 (hypothetical protein Csa_019871, partial [Cucumis sativus])

HSP 1 Score: 372 bits (955), Expect = 2.00e-125
Identity = 190/220 (86.36%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 1   MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK-------AA 60
           MESRAKLR L HTGNILDY+KEFTT+MLEISDLPEKE LFQFRDGLKDWAK       AA
Sbjct: 234 MESRAKLRSLRHTGNILDYVKEFTTIMLEISDLPEKEALFQFRDGLKDWAKVELDRRNAA 293

Query: 61  TKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY 120
           TKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKGLIRRYEGPFS+IE+VGKAAY
Sbjct: 294 TKMKKWADRKRRAREYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAY 353

Query: 121 RL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRR 180
           RL      KIHNVFHVSMLKPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRR
Sbjct: 354 RLELPPRLKIHNVFHVSMLKPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRR 413

Query: 181 RGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 207
           RGVPSYNEYLIAWEGLPESEASWEKEDT+WQFQDEIRRF+
Sbjct: 414 RGVPSYNEYLIAWEGLPESEASWEKEDTLWQFQDEIRRFQ 453

[Close]

BLAST of Chy11G191010 vs. NCBI nr
Match: KGN50791.2 (hypothetical protein Csa_018527 [Cucumis sativus])

HSP 1 Score: 358 bits (920), Expect = 1.36e-118
Identity = 191/261 (73.18%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 1   MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDW----------- 60
           MESRAKLRRL HTGNILDY+KEFTT+MLEISDLPEKE LFQFRDGLKDW           
Sbjct: 288 MESRAKLRRLRHTGNILDYVKEFTTIMLEISDLPEKEALFQFRDGLKDWVKSPFEIVMNQ 347

Query: 61  -------------------------------------AKAATKMKKWADRKRRPKEYQVG 120
                                                AKAATKMKKWADRKRR +EYQVG
Sbjct: 348 QPNTPSALIIPYEGPNPTAYKFAKEWHEECDISRACLAKAATKMKKWADRKRRAREYQVG 407

Query: 121 EKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSML 180
           EKVMVKLLPNQFKSL KVHKGLIRRYEGPFS+IE+VGKAAYRL      KIHNVFHVSML
Sbjct: 408 EKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAYRLELPPRLKIHNVFHVSML 467

Query: 181 KPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPES 207
           KPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRRRGVPSYNEYLIAWEGLPES
Sbjct: 468 KPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRRRGVPSYNEYLIAWEGLPES 527

[Close]

BLAST of Chy11G191010 vs. NCBI nr
Match: KAE8647079.1 (hypothetical protein Csa_023021 [Cucumis sativus])

HSP 1 Score: 315 bits (808), Expect = 1.09e-97
Identity = 164/193 (84.97%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 1   MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK-------AA 60
           MESRAKLRRL HTGNILDY+KEFTT+MLEISDLPEKE LFQFRDGLKDWAK       AA
Sbjct: 711 MESRAKLRRLRHTGNILDYVKEFTTIMLEISDLPEKEALFQFRDGLKDWAKVELDRRNAA 770

Query: 61  TKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY 120
           TKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKGLIRRYEGPFS+IE+VGKAAY
Sbjct: 771 TKMKKWADRKRRAREYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAY 830

Query: 121 RL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRR 180
           RL      KIHNVFHVSMLKPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRR
Sbjct: 831 RLELPPRLKIHNVFHVSMLKPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRR 890

[Close]

BLAST of Chy11G191010 vs. NCBI nr
Match: KAE8653039.1 (hypothetical protein Csa_019702 [Cucumis sativus])

HSP 1 Score: 300 bits (768), Expect = 1.60e-96
Identity = 166/214 (77.57%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 1   MESRAKLRRLSHTG-NILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKW 60
           MESRAKLRRL HTG N   Y  +F     E  D+         R  L   AKAATKMKKW
Sbjct: 250 MESRAKLRRLRHTGPNPTAY--KFAKEWHEECDIS--------RACL---AKAATKMKKW 309

Query: 61  ADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAYRL---- 120
           ADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKGLIRRYEGPFS+IE+VGKAAYRL    
Sbjct: 310 ADRKRRAREYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAYRLELPP 369

Query: 121 --KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSY 180
             KIHNVFHVSMLKPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRRRGVPSY
Sbjct: 370 RLKIHNVFHVSMLKPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRRRGVPSY 429

Query: 181 NEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK 207
           NEYLIAWEGLPESEASWEKEDT+WQFQDEIRRF+
Sbjct: 430 NEYLIAWEGLPESEASWEKEDTLWQFQDEIRRFQ 450

The following BLAST results are available for this feature:

BLAST of Chy11G191010 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G191010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BX70	1.5e-67	77.30	Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7UCY6	1.5e-67	77.91	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7VEX8	2.0e-67	77.30	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=...	[more]
A0A5A7VEX8	2.0e-14	82.35	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=...	[more]
A0A5A7UJ25	4.5e-67	77.91	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002340 P...	[more]

BLAST of Chy11G191010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649329.1	5.04e-129	90.09	hypothetical protein Csa_015359 [Cucumis sativus]	[more]
KAE8653146.1	2.00e-125	86.36	hypothetical protein Csa_019871, partial [Cucumis sativus]	[more]
KGN50791.2	1.36e-118	73.18	hypothetical protein Csa_018527 [Cucumis sativus]	[more]
KAE8647079.1	1.09e-97	84.97	hypothetical protein Csa_023021 [Cucumis sativus]	[more]
KAE8653039.1	1.60e-96	77.57	hypothetical protein Csa_019702 [Cucumis sativus]	[more]

BLAST of Chy11G191010 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 160..207 e-value: 1.1E-8 score: 34.8
None	No IPR available	GENE3D	2.40.50.40		coord: 150..207 e-value: 6.4E-9 score: 37.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 154..207 score: 12.123101
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 116..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G191010.1	Chy11G191010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0007165	signal transduction
cellular_component	GO:0016020	membrane
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003953	NAD+ nucleosidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity