Chy11G190960 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G190960
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	E3 ubiquitin-protein ligase RNF126-like
Location	chrH11: 5637843 .. 5638511 (+)
RNA-Seq Expression	Chy11G190960
Synteny	Chy11G190960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCCCAACCGCTTTCTCCTTCCGATGCTCTATTCGCTCCAACGCCAACGGCAGTGCTGCCACCGACGGTCAACCCTTGCAATTCGTTGAACTCCGATTGGGGCATTTCAGCCAACTGGTTCTTTCACCTTCTCACCAAATCCTTCAACAAACTTCCCCCATTCTAATTTCTGATACTCTGATCCCTTTCCCACTGCGGGAGCTTGAAGATCCACCATTCGTCTCCCACTCCTTCCTCTGTCGCTTTCTCTCTTCCTACAACATCTCCGACGCCGTCTGTGACGCCATCTTCCTCAAGATCTCTTCATTTGCCCTTCAATTGGTTGCCGGTAACCTCAATTCCAACTTCCACATCATAGCCGCTTTGGATTTTGTGTACACGCACTGGGTGGACCTGGACCCAGCAGAAGATGCAGCGGCGGTGAGGCAAGGGGCGCCGAGGTCGGCGATTGAGAGGTTGATGAAGGAGAAATATGATGGGAATGGAGGGGAAGAGATGGAAGATGAGTGTAGTGTTTGTTATGAAGACCTCCATGGGAAAACAGAGAAGGAAAAGGAAGTGAGCAGGATCCCATGCGGGCACATGTTTCATAAGTCATGTATTCTCAAATGGCTTAAATTCAGCAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGCATAG

mRNA sequence

ATGTCTTTCCCAACCGCTTTCTCCTTCCGATGCTCTATTCGCTCCAACGCCAACGGCAGTGCTGCCACCGACGGTCAACCCTTGCAATTCGTTGAACTCCGATTGGGGCATTTCAGCCAACTGGTTCTTTCACCTTCTCACCAAATCCTTCAACAAACTTCCCCCATTCTAATTTCTGATACTCTGATCCCTTTCCCACTGCGGGAGCTTGAAGATCCACCATTCGTCTCCCACTCCTTCCTCTGTCGCTTTCTCTCTTCCTACAACATCTCCGACGCCGTCTGTGACGCCATCTTCCTCAAGATCTCTTCATTTGCCCTTCAATTGGTTGCCGGTAACCTCAATTCCAACTTCCACATCATAGCCGCTTTGGATTTTGTGTACACGCACTGGGTGGACCTGGACCCAGCAGAAGATGCAGCGGCGGTGAGGCAAGGGGCGCCGAGGTCGGCGATTGAGAGGTTGATGAAGGAGAAATATGATGGGAATGGAGGGGAAGAGATGGAAGATGAGTGTAGTGTTTGTTATGAAGACCTCCATGGGAAAACAGAGAAGGAAAAGGAAGTGAGCAGGATCCCATGCGGGCACATGTTTCATAAGTCATGTATTCTCAAATGGCTTAAATTCAGCAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGCATAG

Coding sequence (CDS)

ATGTCTTTCCCAACCGCTTTCTCCTTCCGATGCTCTATTCGCTCCAACGCCAACGGCAGTGCTGCCACCGACGGTCAACCCTTGCAATTCGTTGAACTCCGATTGGGGCATTTCAGCCAACTGGTTCTTTCACCTTCTCACCAAATCCTTCAACAAACTTCCCCCATTCTAATTTCTGATACTCTGATCCCTTTCCCACTGCGGGAGCTTGAAGATCCACCATTCGTCTCCCACTCCTTCCTCTGTCGCTTTCTCTCTTCCTACAACATCTCCGACGCCGTCTGTGACGCCATCTTCCTCAAGATCTCTTCATTTGCCCTTCAATTGGTTGCCGGTAACCTCAATTCCAACTTCCACATCATAGCCGCTTTGGATTTTGTGTACACGCACTGGGTGGACCTGGACCCAGCAGAAGATGCAGCGGCGGTGAGGCAAGGGGCGCCGAGGTCGGCGATTGAGAGGTTGATGAAGGAGAAATATGATGGGAATGGAGGGGAAGAGATGGAAGATGAGTGTAGTGTTTGTTATGAAGACCTCCATGGGAAAACAGAGAAGGAAAAGGAAGTGAGCAGGATCCCATGCGGGCACATGTTTCATAAGTCATGTATTCTCAAATGGCTTAAATTCAGCAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGCATAG

Protein sequence

MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISDTLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELEA*

Homology

[Close]

BLAST of Chy11G190960 vs. ExPASy Swiss-Prot
Match: Q9Y7K6 (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.9e-10
Identity = 27/73 (36.99%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 152 IERLMKEKYDG----NGGEEMEDECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKWL 211
           ++R +KE +D     +  + M+  C +CY+D++     EK+ +++PCGH+F K+C+ KWL
Sbjct: 83  VKRAVKEAWDSFEPLSNDQLMDLTCPICYDDMN--ENDEKQATKMPCGHIFGKNCLQKWL 142

Query: 212 KFSNSCPLCRREL 221
           +   +CPLCR+E+
Sbjct: 143 ENHCTCPLCRKEV 153

[Close]

BLAST of Chy11G190960 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 147 APRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKW 206
           A +SAIE L       +      ++C+VC +D     E+  E  ++PC H++HK C+L W
Sbjct: 199 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDF----EEGTEAKQMPCKHLYHKDCLLPW 258

Query: 207 LKFSNSCPLCRREL 221
           L+  NSCP+CR EL
Sbjct: 259 LELHNSCPVCRHEL 268

[Close]

BLAST of Chy11G190960 vs. ExPASy Swiss-Prot
Match: Q9VE61 (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN=CG7694 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-09
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 143 VRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSC 202
           V + + R+ +E  + E    + G ++  ECSVC E      E+ ++   +PC H FH+ C
Sbjct: 43  VPEASKRAILELPVHEIVKSDEGGDL--ECSVCKE----PAEEGQKYRILPCKHEFHEEC 102

Query: 203 ILKWLKFSNSCPLCRRELE 222
           IL WLK +NSCPLCR ELE
Sbjct: 103 ILLWLKKTNSCPLCRYELE 115

[Close]

BLAST of Chy11G190960 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-09
Identity = 36/99 (36.36%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 122 AALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHG 181
           A L  +  H  + DP+ +       A + A+E L   K       E    CSVC +DL  
Sbjct: 158 AGLSLLLQHLAESDPSRNGT---PPAKKEAVEALPTVKI------EEVVSCSVCLDDL-- 217

Query: 182 KTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRREL 221
             E   +  ++PC H FH SCIL WL+  +SCP+CR EL
Sbjct: 218 --EVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFEL 243

[Close]

BLAST of Chy11G190960 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.5e-09
Identity = 35/96 (36.46%), Postives = 46/96 (47.92%), Query Frame = 0


Query: 125 DFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGKTE 184
           D     W    P   A AV +  PR+ I              + E +C VC  +     E
Sbjct: 52  DLGLVDWEHHLPPPAAKAVVESLPRTVIR-----------SSKAELKCPVCLLEF----E 111

Query: 185 KEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRREL 221
           +E+ V  +PC H+FH +CIL WL  +NSCPLCR EL
Sbjct: 112 EEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 132

[Close]

BLAST of Chy11G190960 vs. ExPASy TrEMBL
Match: A0A0A0LRB0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 212/222 (95.50%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           MS PT FSFRCSIR NANGSAAT+GQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
           TLI FPLRELEDPPF+SHS LCRFLSSYNISDAVCDAIFLKISSFA QLVAGNLNSNFHI
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHI 120

Query: 121 IAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLH 180
           IAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLH
Sbjct: 121 IAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLH 180

Query: 181 GKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELEA 223
           GKTEKEKEVSRIPCGHMFHKSCILKWLK SNSCPLCR ELEA
Sbjct: 181 GKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELEA 222

[Close]

BLAST of Chy11G190960 vs. ExPASy TrEMBL
Match: A0A0A0L3Z2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 172/230 (74.78%), Postives = 187/230 (81.30%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           MS P  FSF+CSIR N   S ATDGQPLQFV+LRL HF QLV +PS QILQQTSP LISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVA---GNLNSN 120
           TLIPF L ELEDPPF+S+ FL RFLSSY+IS AVCDAIF  ISSFA Q++     N+N N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEME--DECSVC 180
           FHIIA +D VYTHWVDLDPAEDA AVR+GA  S IER+MKEKYDGNGGEE E  D+CSVC
Sbjct: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180

Query: 181 YEDLHGK----TEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 222
           YE L+GK     EKEKEVSRIPCGHM+HKSCILKWLK SNSCPLCRRELE
Sbjct: 181 YEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELE 230

[Close]

BLAST of Chy11G190960 vs. ExPASy TrEMBL
Match: A0A6J1KYV1 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499496 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.3e-59
Identity = 122/224 (54.46%), Postives = 157/224 (70.09%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           ++F    SF+CSI+S  NG+ A+  QP+Q +ELRLGH + L+   S QILQQT    I D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASGQQPIQLLELRLGHSTHLISRSSRQILQQTPSTPIGD 62

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
            L PF LR+L+ PPF+S+ ++ +FLSS++I  A CD I+ +ISSFALQL AGN++ NFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNMDLNFHI 122

Query: 121 IAALDFVYTHWVDLDP---AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180
           +  +D     WVDLDP    E + A   GAP SAIERL ++K+DG   EE E +CSVC E
Sbjct: 123 VVEVDVNEMIWVDLDPFLVEEYSPAEMNGAPASAIERLQRQKFDGLREEEEEGDCSVCCE 182

Query: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 222
            L G    E+EVSRIPCGH++HK CILKWL+ SNSCPLCR +LE
Sbjct: 183 ALKG----EEEVSRIPCGHVYHKFCILKWLQMSNSCPLCRTKLE 222

[Close]

BLAST of Chy11G190960 vs. ExPASy TrEMBL
Match: A0A6J1G7Z5 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC111451666 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 8.2e-59
Identity = 120/224 (53.57%), Postives = 159/224 (70.98%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           ++F    SF+CSI+S  NG+ A+D QP+Q +ELRLG+ + L+   S QILQQT    + D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGD 62

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
            L PF LR+L+ PPF+S+ ++ +FLSS++I  A CD I+ +ISSFALQL AGN++ NFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHI 122

Query: 121 IAALDFVYTHWVDLDP---AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180
           +  +D +   WVDLDP    E + A   GAP SAIERL ++++DG   EE E +CSVC E
Sbjct: 123 VVEVDVIEMIWVDLDPFLVEEYSPAEMNGAPASAIERLQRQEFDGLREEEEEGDCSVCCE 182

Query: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 222
            L G    E+EVSRIPCGH++HK CILKWL+ SNSCPLCR +LE
Sbjct: 183 ALKG----EEEVSRIPCGHVYHKCCILKWLQMSNSCPLCRTKLE 222

[Close]

BLAST of Chy11G190960 vs. ExPASy TrEMBL
Match: A0A6J1G809 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC111451600 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.4e-58
Identity = 123/224 (54.91%), Postives = 158/224 (70.54%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           ++F  + SF+CS R+N+ G+ A+  QP+QFVELRLGH S L+   S QILQQT    + D
Sbjct: 3   LTFGDSLSFQCSFRTNSTGTLASHEQPMQFVELRLGHSSHLISRSSRQILQQTPSTPMGD 62

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
            L PF LR+L  PPF+S S + RFLSS++I  AVC+ IF++ISSFAL L AGN++ NFHI
Sbjct: 63  ALFPFILRDLLHPPFLSKSHVLRFLSSFSIPIAVCNIIFVEISSFALHLAAGNVDLNFHI 122

Query: 121 IAALDFVYTHWVDLDP---AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180
           +  +D +   WVDLDP    E +     GAP SAIERL ++++DG   EE E ECSVC E
Sbjct: 123 VVDVDAIEMIWVDLDPFLIEEYSPPAMNGAPASAIERLQRQEFDGL-REEEEGECSVCCE 182

Query: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 222
            L G    E+EVSRIPCGH++HK CIL+WL+ SNSCPLCR +LE
Sbjct: 183 ALKG----EEEVSRIPCGHVYHKCCILRWLQMSNSCPLCRTKLE 221

[Close]

BLAST of Chy11G190960 vs. NCBI nr
Match: XP_011650219.1 (RING-H2 finger protein ATL16 [Cucumis sativus] >KGN63362.1 hypothetical protein Csa_022479 [Cucumis sativus])

HSP 1 Score: 432 bits (1111), Expect = 1.61e-152
Identity = 212/222 (95.50%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           MS PT FSFRCSIR NANGSAAT+GQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
           TLI FPLRELEDPPF+SHS LCRFLSSYNISDAVCDAIFLKISSFA QLVAGNLNSNFHI
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHI 120

Query: 121 IAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLH 180
           IAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLH
Sbjct: 121 IAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLH 180

Query: 181 GKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELEA 222
           GKTEKEKEVSRIPCGHMFHKSCILKWLK SNSCPLCR ELEA
Sbjct: 181 GKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELEA 222

[Close]

BLAST of Chy11G190960 vs. NCBI nr
Match: XP_031740500.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucumis sativus])

HSP 1 Score: 336 bits (862), Expect = 1.93e-114
Identity = 172/230 (74.78%), Postives = 187/230 (81.30%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           MS P  FSF+CSIR N   S ATDGQPLQFV+LRL HF QLV +PS QILQQTSP LISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAG---NLNSN 120
           TLIPF L ELEDPPF+S+ FL RFLSSY+IS AVCDAIF  ISSFA Q++     N+N N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEME--DECSVC 180
           FHIIA +D VYTHWVDLDPAEDA AVR+GA  S IER+MKEKYDGNGGEE E  D+CSVC
Sbjct: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180

Query: 181 YEDLHGK----TEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 221
           YE L+GK     EKEKEVSRIPCGHM+HKSCILKWLK SNSCPLCRRELE
Sbjct: 181 YEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELE 230

[Close]

BLAST of Chy11G190960 vs. NCBI nr
Match: KAE8649756.1 (hypothetical protein Csa_012785 [Cucumis sativus])

HSP 1 Score: 256 bits (654), Expect = 2.03e-83
Identity = 134/184 (72.83%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           MS P  FSF+CSIR N   S ATDGQPLQFV+LRL HF QLV +PS QILQQTSP LISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAG---NLNSN 120
           TLIPF L ELEDPPF+S+ FL RFLSSY+IS AVCDAIF  ISSFA Q++     N+N N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEME--DECSVC 179
           FHIIA +D VYTHWVDLDPAEDA AVR+GA  S IER+MKEKYDGNGGEE E  D+CSVC
Sbjct: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180

[Close]

BLAST of Chy11G190960 vs. NCBI nr
Match: XP_023533113.1 (RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244 bits (623), Expect = 3.25e-78
Identity = 126/224 (56.25%), Postives = 157/224 (70.09%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           ++F  + SF+CS R+N  G+ A+  QP+QFVELRLGH S L+   S QILQQT    + D
Sbjct: 3   LTFGDSLSFQCSFRTNTTGNLASHEQPMQFVELRLGHSSHLISRSSRQILQQTPSTPMGD 62

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
            L PF LR+L DPPF+S S + RFLSS+ I  AVC+ IF +ISSFAL L AGN++ NFHI
Sbjct: 63  ALFPFILRDLLDPPFLSKSHVLRFLSSFTIPIAVCNIIFAEISSFALHLAAGNVDLNFHI 122

Query: 121 IAALDFVYTHWVDLDP---AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180
           +  +D +   WVDLDP    E + A   GAP SAIERL ++K+DG   EE E +CSVC E
Sbjct: 123 VVDVDAIEMIWVDLDPFLIEEYSPAAMNGAPASAIERLQRQKFDGLREEEKEGDCSVCCE 182

Query: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 221
            L G    E+EVSRIPCGH++HK CILKWL+ SNSCPLCR +LE
Sbjct: 183 ALKG----EEEVSRIPCGHVYHKCCILKWLEMSNSCPLCRTQLE 222

[Close]

BLAST of Chy11G190960 vs. NCBI nr
Match: KAG6605221.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237 bits (605), Expect = 1.75e-75
Identity = 120/224 (53.57%), Postives = 159/224 (70.98%), Query Frame = 0


Query: 1   MSFPTAFSFRCSIRSNANGSAATDGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60
           ++F    SF+CSI+S  NG+ A+D QP+Q +ELRLG+ + L+   S QILQQT    + D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGD 62

Query: 61  TLIPFPLRELEDPPFVSHSFLCRFLSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHI 120
            L PF LR+L+ PPF+S+ ++ +FLSS++I  A CD I+ +ISSFALQL AGN++ NFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHI 122

Query: 121 IAALDFVYTHWVDLDP---AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180
           +  +D +   WVDLDP    E + A   GAP SAIERL ++++DG   EE E +CSVC E
Sbjct: 123 VVEVDVIEMIWVDLDPFLVEEYSPAEMNGAPASAIERLQRQEFDGLRDEEEEGDCSVCCE 182

Query: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRRELE 221
            L G    E+EVSRIPCGH++HK CILKWL+ SNSCPLCR +LE
Sbjct: 183 ALKG----EEEVSRIPCGHVYHKCCILKWLQMSNSCPLCRTKLE 222

[Close]

BLAST of Chy11G190960 vs. TAIR 10
Match: AT4G05350.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10
Identity = 44/137 (32.12%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 85  LSSYNISDAVCDAIFLKISSFALQLVAGNLNSNFHIIAALDFVYTHWVDLDPAEDAAAVR 144
           L  Y     +CD +  KIS+ A+ L  G  ++ F +  A    Y     +  + D  ++R
Sbjct: 80  LVGYPFESYLCDDLAPKISTAAIDLGFG--HNGFTLTMAATVTYRTVSVM--SNDEKSLR 139

Query: 145 QGAPRSAIERLMKEKYDGNGGEEMEDE-CSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCI 204
                  + R+  E++      +ME E CS+C E L     K ++V+R+ C H+FH  C+
Sbjct: 140 M----VLLGRMKAEEFK---SLKMETEPCSICLESL-VSGPKPRDVTRMTCSHVFHNGCL 199

Query: 205 LKWLKFSNSCPLCRREL 221
           L+WLK  N+CPLCR E+
Sbjct: 200 LEWLKRKNTCPLCRTEI 204

[Close]

BLAST of Chy11G190960 vs. TAIR 10
Match: AT4G12190.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 167 EMEDE-CSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRREL 221
           +ME E CS+C E L     K ++++R+ C H+FH  C+L+WLK  N+CPLCR EL
Sbjct: 16  KMETEPCSICLESL-VSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69

[Close]

BLAST of Chy11G190960 vs. TAIR 10
Match: AT4G12140.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 43/150 (28.67%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 74  PFVSHSFLCRFLSSYNISDA--VCDAIFLKISSFALQLVAGNLNSNFHIIAALDFVYTH- 133
           P  SH  +   L     SD   +CD +  KIS+ A+   AG +N+   +   +   Y + 
Sbjct: 63  PSCSHHHIQSLLHDQLHSDDNWLCDHLVPKISTAAIN--AGFMNNGVELTVGVTVTYQYV 122

Query: 134 WVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGKTEKEKEVS 193
            V+   ++++  VR G+ ++  E L     +        D CS+C + L   +  +   +
Sbjct: 123 HVEETSSKESRMVRLGSMKA--EELKSFNME-------TDSCSICLQSL--VSSSKTGPT 182

Query: 194 RIPCGHMFHKSCILKWLKFSNSCPLCRREL 221
           R+ C H+FH SC+++WLK  N+CP+CR  L
Sbjct: 183 RMSCSHVFHSSCLVEWLKRKNTCPMCRTVL 199

[Close]

BLAST of Chy11G190960 vs. TAIR 10
Match: AT5G67120.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 127 VYTHWVDLDPAEDAAAVRQGAPRSAI-ERLMKEKYDGNGGEEMEDECSVCYEDLHGKTEK 186
           ++T+   L   ++    R G     I E L++ KY+    +E +  C +C +    K + 
Sbjct: 182 IFTYEELLSITDETGDERTGLSEEVIDENLIRRKYEKRSDDETK-RCVICQQ----KLKD 241

Query: 187 EKEVSRIPCGHMFHKSCILKWLKFSNSCPLCRREL 221
            +EVS++ CGH FH  CI  WL  +N CPLC RE+
Sbjct: 242 NEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNREV 271

[Close]

BLAST of Chy11G190960 vs. TAIR 10
Match: AT5G37230.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 149 RSAIERLMKEKYD--GNGGEEMEDECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKW 208
           R   +RL++E+     N G+E E  CS+C ED   ++  +  +    C H+FH+SCI KW
Sbjct: 128 RDMFQRLLEEQTMELTNLGDEEETTCSICMEDF-SESHDDNIILLPDCFHLFHQSCIFKW 187

Query: 209 LKFSNSCPLCRR 219
           LK   SCPLCRR
Sbjct: 188 LKRQRSCPLCRR 198

The following BLAST results are available for this feature:

BLAST of Chy11G190960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y7K6	8.9e-10	36.99	Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai...	[more]
P0CH30	2.6e-09	39.19	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9VE61	5.8e-09	41.77	E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN...	[more]
Q6AVN2	5.8e-09	36.36	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q6AXU4	7.5e-09	36.46	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]

BLAST of Chy11G190960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRB0	2.3e-117	95.50	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 P...	[more]
A0A0A0L3Z2	1.3e-88	74.78	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 P...	[more]
A0A6J1KYV1	6.3e-59	54.46	E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1G7Z5	8.2e-59	53.57	E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1G809	2.4e-58	54.91	probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Chy11G190960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650219.1	1.61e-152	95.50	RING-H2 finger protein ATL16 [Cucumis sativus] >KGN63362.1 hypothetical protein ...	[more]
XP_031740500.1	1.93e-114	74.78	E3 ubiquitin-protein ligase At1g63170-like [Cucumis sativus]	[more]
KAE8649756.1	2.03e-83	72.83	hypothetical protein Csa_012785 [Cucumis sativus]	[more]
XP_023533113.1	3.25e-78	56.25	RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605221.1	1.75e-75	53.57	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Chy11G190960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05350.1	1.8e-10	32.12	RING/U-box superfamily protein	[more]
AT4G12190.1	5.4e-10	49.09	RING/U-box superfamily protein	[more]
AT4G12140.1	5.4e-10	28.67	RING/U-box superfamily protein	[more]
AT5G67120.1	5.4e-10	33.68	RING/U-box superfamily protein	[more]
AT5G37230.1	5.4e-10	43.06	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 172..216 e-value: 1.7E-8 score: 44.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 170..217 e-value: 1.2E-13 score: 51.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 172..217 score: 13.271187
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 147..222 e-value: 1.2E-20 score: 74.4
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 78..221
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 78..221
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 166..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G190960.1	Chy11G190960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity