Chy11G188640 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G188640
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 2606974 .. 2607681 (-)
RNA-Seq Expression	Chy11G188640
Synteny	Chy11G188640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGATTTTTTCTCTCTTTTGTCCAACCAGTCTTCGTCATTCTCTCTGGCTTCCTCTTCCTTCGTCTTCACGCACGAGCTCTCTCCGACTTCCTCTTCTACTCCAGCACAGCATGCATGGGCAAGAAAGTTCCTCGAGAGAGACTTAGAGATGGGTGGTGGGAGAGTTGGGCGAGACTGAGAGAGTGAGACCAACTGAAGATGGGCGAGAGTGACACCAAGCGAGAGAGACTGTGAGAGGAGTGACACCAACATGCAAAGACTAAGAGAGATTGAGCGAGACGGAGACAAAGGAGACTGCTTCTTCCGCATGCACGTGAGTGTATTTTGGAAATTATTAGTTTGATGTCAGCAAAAATGGGTTATTTTCTCTCCAATTTTTGGATCATCCACAAATTCGACTCTTTTTTCCGTTCCACTTCTAATTGCTCACTTTTTTTCATTTAAAAATCATTTCAAGATCCAACAATTAGCAAAAACGTTATCATGGAAATATTTCCATTAGAAATGTCGAAGTCTCAACTTCATGAAAATATGATATTGGTGGAAAATTTTAAAAGTTTCAATTAGTTAATGTTACTTAGTTTTAGCAAATATAGATTTAGATTGTAGTTCAATAACAACTTTTAATTATCATTTCTTCATCTAATTTAACGGAATTTTGATTTTCAATTTTTCCCTTTTGATGGTTATAGACTCATAGAACAT

mRNA sequence

TTATGATTTTTTCTCTCTTTTGTCCAACCAGTCTTCGTCATTCTCTCTGGCTTCCTCTTCCTTCGTCTTCACGCACGAGCTCTCTCCGACTTCCTCTTCTACTCCAGCACAGCATGCATGGGCAAGAAAGTTCCTCGAGAGAGACTTAGAGATGGGTGGTGGGAGAGTTGGGCGAGACTGAGAGAGTGAGACCAACTGAAGATGGGCGAGAGTGACACCAAGCGAGAGAGACTGTGAGAGGAGTGACACCAACATGCAAAGACTAAGAGAGATTGAGCGAGACGGAGACAAAGGAGACTGCTTCTTCCGCATGCACGTGAGTGTATTTTGGAAATTATTAAACAT

Coding sequence (CDS)

TTATGATTTTTTCTCTCTTTTGTCCAACCAGTCTTCGTCATTCTCTCTGGCTTCCTCTTCCTTCGTCTTCACGCACGAGCTCTCTCCGACTTCCTCTTCTACTCCAGCACAGCATGCATGGGCAAGAAAGTTCCTCGAGAGAGACTTAGAGATGGGTGGTGGGAGAGTTGGGCGAGACTGAGAGAGTGAGACCAACTGAAGATGGGCGAGAGTGACACCAAGCGAGAGAGACTGTGAGAGGAGTGACACCAACATGCAAAGACTAAGAGAGATTGAGCGAGACGGAGACAAAGGAGACTGCTTCTTCCGCATGCACGTGAGTGTATTTTGGAAATTATTAAACAT

Protein sequence

L*FFLSFVQPVFVILSGFLFLRLHARALSDFLFYSSTACMGKKVPRERLRDGWWESWARLRE*DQLKMGESDTKRERL*EE*HQHAKTKRD*ARRRQRRLLLPHARECILEIIKH

Homology

The following BLAST results are available for this feature:

BLAST of Chy11G188640 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G188640 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G188640 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G188640 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G188640.1	Chy11G188640.1	mRNA