Chy11G188170 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G188170
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	zinc-regulated protein 8-like
Location	chrH11: 2240858 .. 2241118 (-)
RNA-Seq Expression	Chy11G188170
Synteny	Chy11G188170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCTCCACCTCCCCCGCCTTCGACCAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCTCCCACCCAACCTTTCTCCGTAACCTCAAGAAGCACGGTTTTGGTTGCATCGAGTGGCTCGCCGCCGTCGTCCATGAAGTTCGTCGTGTTTGA

mRNA sequence

ATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCTCCACCTCCCCCGCCTTCGACCAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCTCCCACCCAACCTTTCTCCGTAACCTCAAGAAGCACGGTTTTGGTTGCATCGAGTGGCTCGCCGCCGTCGTCCATGAAGTTCGTCGTGTTTGA

Coding sequence (CDS)

ATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCTCCACCTCCCCCGCCTTCGACCAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCTCCCACCCAACCTTTCTCCGTAACCTCAAGAAGCACGGTTTTGGTTGCATCGAGTGGCTCGCCGCCGTCGTCCATGAAGTTCGTCGTGTTTGA

Protein sequence

MTPLQSYTSLKDLLPDSPSPPPSSTSPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRNLKKHGFGCIEWLAAVVHEVRRV*

Homology

[Close]

BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.0e-40
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1   MTPLQSYTSLKDLLPDSPSPPPSSTSPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPT 60
           MTPLQSYTSLKDLLPDSPSPPPS+TSPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPT
Sbjct: 36  MTPLQSYTSLKDLLPDSPSPPPSATSPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPT 95

Query: 61  FLRNLKKHGFGCIEWLAAVVHEVRRV 87
           FLR LKKHGFGCIEWLAAVVHEVRRV
Sbjct: 96  FLRILKKHGFGCIEWLAAVVHEVRRV 121

[Close]

BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A5N6QNT5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005290 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.3e-11
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 6   SYTSLKDLLP-DSPS-PPPSSTSPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLR 65
           +YTSL+DLLP  SPS   P+  S  +D++PIKNPLVKHAALAYLQPM TP  T +  F  
Sbjct: 67  TYTSLRDLLPASSPSVMSPTHNSSWYDEIPIKNPLVKHAALAYLQPMSTPAETGNKGFFG 126

Query: 66  NLKK------HGFGCIEWLAAVVHEVR 85
            L++        FGC  WL  VV  ++
Sbjct: 127 RLRQKCSCGHRWFGCFGWLGDVVSRIK 153

[Close]

BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.6e-11
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 6   SYTSLKDLLPDSPSPPPSST-SPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRN 65
           +YTSLKDLLP SP    S T + ++ ++PIKNPLVKHAALAYLQPM TPP       LR 
Sbjct: 47  TYTSLKDLLPASPPTIMSPTHNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRM 106

Query: 66  LKK-------HGFGCIEWLAAVV 81
           L++       +G GC  WL  VV
Sbjct: 107 LREKCVCGGANGLGCFAWLGDVV 129

[Close]

BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.6e-11
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 6   SYTSLKDLLPDSPSPPPSST-SPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRN 65
           +YTSLKDLLP SP    S T + ++ ++PIKNPLVKHAALAYLQPM TPP       LR 
Sbjct: 47  TYTSLKDLLPASPPTIMSPTHNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRM 106

Query: 66  LKK-------HGFGCIEWLAAVV 81
           L++       +G GC  WL  VV
Sbjct: 107 LREKCVCGGANGLGCFAWLGDVV 129

[Close]

BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.6e-11
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 6   SYTSLKDLLPDSPSPPPSST-SPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRN 65
           +YTSLKDLLP SP    S T + ++ ++PIKNPLVKHAALAYLQPM TPP       LR 
Sbjct: 47  TYTSLKDLLPASPPTIMSPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRM 106

Query: 66  LKK-------HGFGCIEWLAAVV 81
           L++       +G GC  WL  VV
Sbjct: 107 LREKCLCEGTNGVGCFSWLGDVV 129

[Close]

BLAST of Chy11G188170 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132 bits (333), Expect = 7.55e-38
Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1   MTPLQSYTSLKDLLPDSPSPPPSST----SPAFDQLPIKNPLVKHAALAYLQPMLTPPTT 60
           MTPLQSYTSLKDLLPD+PSPPPS+      PA+D+LPIKNPLVKHAALAYLQPMLTPP  
Sbjct: 27  MTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAYLQPMLTPPAA 86

Query: 61  SHPTFLRNLKKHGFGCIEWLAAVVHEV 83
              +F+R LKKHGFGCIEWL AV+ E+
Sbjct: 87  GDRSFMRRLKKHGFGCIEWLVAVIGEL 113

[Close]

BLAST of Chy11G188170 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica])

HSP 1 Score: 75.9 bits (185), Expect = 6.77e-15
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 7   YTSLKDLLPDSPSPPPSSTSP----AFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFL 66
           YTSLKDLLP S   PP+  SP    ++ ++PIKNPLVKHAALAYLQPM TPP       L
Sbjct: 48  YTSLKDLLPAS---PPTIMSPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLL 107

Query: 67  RNLKK-------HGFGCIEWLAAVV 80
           R L++       +G GC  WL  VV
Sbjct: 108 RMLREKCLCEGTNGVGCFSWLGDVV 129

[Close]

BLAST of Chy11G188170 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium])

HSP 1 Score: 75.9 bits (185), Expect = 6.77e-15
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 7   YTSLKDLLPDSPSPPPSSTSP----AFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFL 66
           YTSLKDLLP S   PP+  SP    ++ ++PIKNPLVKHAALAYLQPM TPP       L
Sbjct: 48  YTSLKDLLPAS---PPTIMSPTHNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLL 107

Query: 67  RNLKK-------HGFGCIEWLAAVV 80
           R L++       +G GC  WL  VV
Sbjct: 108 RMLREKCVCGGANGLGCFAWLGDVV 129

[Close]

BLAST of Chy11G188170 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 75.9 bits (185), Expect = 6.77e-15
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 7   YTSLKDLLPDSPSPPPSSTSP----AFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFL 66
           YTSLKDLLP S   PP+  SP    ++ ++PIKNPLVKHAALAYLQPM TPP       L
Sbjct: 48  YTSLKDLLPAS---PPTIMSPTHNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLL 107

Query: 67  RNLKK-------HGFGCIEWLAAVV 80
           R L++       +G GC  WL  VV
Sbjct: 108 RMLREKCVCGGANGLGCFAWLGDVV 129

[Close]

BLAST of Chy11G188170 vs. NCBI nr
Match: XP_011458695.1 (PREDICTED: uncharacterized protein LOC105349779 [Fragaria vesca subsp. vesca])

HSP 1 Score: 75.5 bits (184), Expect = 7.16e-15
Identity = 42/82 (51.22%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 7   YTSLKDLLPDSPSPPPSSTSP----AFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFL 66
           YTSL+DLLP S   PP+  SP    ++ ++PIKNPLVKHAALAYLQPM TPP       L
Sbjct: 40  YTSLRDLLPSS---PPTIASPTHNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGGKGIL 99

Query: 67  RNLK-----KHGFGCIEWLAAV 79
           R ++       G GC++WL  V
Sbjct: 100 RTIRDKCGCSDGIGCVDWLRDV 118

[Close]

BLAST of Chy11G188170 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 2.6e-05
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 3   PLQSYTSLKDLLPDSPSPPPS-------STSPAFDQLPIKNPLVKHAALAYLQPMLTPPT 62
           PL  YTSLKD+LP S +   S       +++ +   + I+N LVK AA +YLQP  TP  
Sbjct: 37  PLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVKQAACSYLQPS-TPTP 96

Query: 63  TSHPTFLRNL 66
           +S+P+FLR +
Sbjct: 97  SSNPSFLRRV 105

The following BLAST results are available for this feature:

BLAST of Chy11G188170 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G188170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPR9	2.0e-40	97.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1	[more]
A0A5N6QNT5	4.3e-11	50.57	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005290 PE=4 SV=1	[more]
A0A314Z2H1	5.6e-11	53.01	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200...	[more]
A0A6P5S7A4	5.6e-11	53.01	uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE...	[more]
A0A251MZ17	5.6e-11	53.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1	[more]

BLAST of Chy11G188170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571006.1	7.55e-38	74.71	hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_007199228.2	6.77e-15	52.94	uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical pr...	[more]
XP_021810412.1	6.77e-15	52.94	uncharacterized protein LOC110753763 [Prunus avium]	[more]
PQQ14465.1	6.77e-15	52.94	uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]	[more]
XP_011458695.1	7.16e-15	51.22	PREDICTED: uncharacterized protein LOC105349779 [Fragaria vesca subsp. vesca]	[more]

BLAST of Chy11G188170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52520.1	2.6e-05	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 2..83
None	No IPR available	PANTHER	PTHR34569:SF12	SUBFAMILY NOT NAMED	coord: 2..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G188170.1	Chy11G188170.1	mRNA