Chy11G188170 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCTCCACCTCCCCCGCCTTCGACCAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCTCCCACCCAACCTTTCTCCGTAACCTCAAGAAGCACGGTTTTGGTTGCATCGAGTGGCTCGCCGCCGTCGTCCATGAAGTTCGTCGTGTTTGA ATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCTCCACCTCCCCCGCCTTCGACCAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCTCCCACCCAACCTTTCTCCGTAACCTCAAGAAGCACGGTTTTGGTTGCATCGAGTGGCTCGCCGCCGTCGTCCATGAAGTTCGTCGTGTTTGA ATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCTCCACCTCCCCCGCCTTCGACCAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCTCCCACCCAACCTTTCTCCGTAACCTCAAGAAGCACGGTTTTGGTTGCATCGAGTGGCTCGCCGCCGTCGTCCATGAAGTTCGTCGTGTTTGA MTPLQSYTSLKDLLPDSPSPPPSSTSPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRNLKKHGFGCIEWLAAVVHEVRRV* Homology
BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.0e-40 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A5N6QNT5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005290 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.3e-11 Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.6e-11 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.6e-11 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Chy11G188170 vs. ExPASy TrEMBL
Match: A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.6e-11 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Chy11G188170 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 132 bits (333), Expect = 7.55e-38 Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Chy11G188170 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica]) HSP 1 Score: 75.9 bits (185), Expect = 6.77e-15 Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Chy11G188170 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium]) HSP 1 Score: 75.9 bits (185), Expect = 6.77e-15 Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Chy11G188170 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 75.9 bits (185), Expect = 6.77e-15 Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Chy11G188170 vs. NCBI nr
Match: XP_011458695.1 (PREDICTED: uncharacterized protein LOC105349779 [Fragaria vesca subsp. vesca]) HSP 1 Score: 75.5 bits (184), Expect = 7.16e-15 Identity = 42/82 (51.22%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Chy11G188170 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.6e-05 Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|