Chy11G187940 (gene) Cucumber (hystrix) v1

Overview
NameChy11G187940
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionhomeobox protein 6
LocationchrH11: 2009741 .. 2011239 (-)
RNA-Seq ExpressionChy11G187940
SyntenyChy11G187940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACAGCGGATGACTTGTTCTTTCAAGGACATATGCTCCCTCTACGTCTCTCATTCAGCTCTGAAAATTCCCAGAATAATAATGGAAATTTGTGGAGTAGATCGGAGTCTATGGATCGTAATAATATGTTGAGGTTTAGAAATGAAAGCACTAGTAGCAGTAGCAGTAGAAGCCATTATTCAAGGTACGTAACTTTAACCTTTCATCAAACTCATCAAATTATTTATATTAATACACACTTTATGGCCAAGTTGTGAAAATTGCCTTAAATTAAGGTGGTAAATTGCAATTACCTCAAACTTTCATGAAGAGAAAAAAAGAGTACTCGAGCTTGTTCGTCGCTAAAATTGGATACTCACATAATTGTTGAAATTGAACTAGTTGCGTACGTTTCAAAAGTTTAATTTTTAGAATTGAAAGTTTAAGGAAATAAAAATGGGTAGTAAGTAATTAGAATTTGGTTATGTTAGAGTTTAATTTGTTAAACTTTCTAAATAATCAATATGCATGTCTTTTAGAAAACAAAAACTTTCACAAATAGTTTTATACTATTTACTAAAATTTCAACCAATTAATTAGATAAATTTTAATTATGTATTAGAGGTTAAATTCTAACTTTTTATAATAGGATCGTTTTAAAGATAAAGTTTTCATTGTTAATGTTACTTTTTATAGATTTTTATCATGCATTCATTAATGGGTCATTTCTTCAAATTCTCGCTTTTATCTCTAAGTGTTCAATCGTAAATTTATTGTTTTTTTTTCAAAAAAGTTAGTTTTTTTCCTTATTTGTAGTTCACGAAGATAGGCTACATCTAGCTACGATTGATGTAGAAAAACTTATAGATATTCCAAATCTCGAGACTTGAAATTTTTTATATCATAGAAAAACAATATCAAATGAAAGAATAATACAAATGGATGTTATATGAAGAAATAACAAGTAACAAAAAATTGTAGCAATTTTTGTTTAGAAAAAATATTGATGTGAACTTGTTTATGTTGCAGGTCATCAAGCCTAAGTAACAATTCCATTTCCATTCCAACAAACTCAAAGCCAAGGCCTTCAAACAACAACGTTTTCCACTCTCACCCAAGTCCAACCCCCCAAATCAGATCCTTCTCAACATCCAGCCACCGGAGCCGGAGTTCCTCTCGATGGGAGTTTTTCCGACTCGGACTTCTTCGAACGCCAGGAATGGAGCTTCACGATCTCAAAACTCGCACCACTACCACAACGACGACAACGGCACATAAAACAACCGCATCAATTCTGGGTGTGGTGAGCTGCAAAAGATCAGTTGAGACAGTACCAACGACGACAGGATCGAAGAATAGAATAAGGAGGGAAAATGTTTTGAAAAACAATAAAAAGAATAACGATAATAATAAAGTTGAAATTAGGGAAAAGGAAAAGGAAAGAAGAGTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGGAGAAGAACAATGA

mRNA sequence

ATGTTGACAGCGGATGACTTGTTCTTTCAAGGACATATGCTCCCTCTACGTCTCTCATTCAGCTCTGAAAATTCCCAGAATAATAATGGAAATTTGTGGAGTAGATCGGAGTCTATGGATCGTAATAATATGTTGAGGTTTAGAAATGAAAGCACTAGTAGCAGTAGCAGTAGAAGCCATTATTCAAGGTCATCAAGCCTAAGTAACAATTCCATTTCCATTCCAACAAACTCAAAGCCAAGGCCTTCAAACAACAACGTTTTCCACTCTCACCCAAGTCCAACCCCCCAAATCAGATCCTTCTCAACATCCAGCCACCGGAGCCGGAGTTCCTCTCGATGGGAGTTTTTCCGACTCGGACTTCTTCGAACGCCAGGAATGGAGCTTCACGATCTCAAAACTCGCACCACTACCACAACGACGACAACGGCACATAAAACAACCGCATCAATTCTGGGTGTGGTGAGCTGCAAAAGATCAGTTGAGACAGTACCAACGACGACAGGATCGAAGAATAGAATAAGGAGGGAAAATGTTTTGAAAAACAATAAAAAGAATAACGATAATAATAAAGTTGAAATTAGGGAAAAGGAAAAGGAAAGAAGAGTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGGAGAAGAACAATGA

Coding sequence (CDS)

ATGTTGACAGCGGATGACTTGTTCTTTCAAGGACATATGCTCCCTCTACGTCTCTCATTCAGCTCTGAAAATTCCCAGAATAATAATGGAAATTTGTGGAGTAGATCGGAGTCTATGGATCGTAATAATATGTTGAGGTTTAGAAATGAAAGCACTAGTAGCAGTAGCAGTAGAAGCCATTATTCAAGGTCATCAAGCCTAAGTAACAATTCCATTTCCATTCCAACAAACTCAAAGCCAAGGCCTTCAAACAACAACGTTTTCCACTCTCACCCAAGTCCAACCCCCCAAATCAGATCCTTCTCAACATCCAGCCACCGGAGCCGGAGTTCCTCTCGATGGGAGTTTTTCCGACTCGGACTTCTTCGAACGCCAGGAATGGAGCTTCACGATCTCAAAACTCGCACCACTACCACAACGACGACAACGGCACATAAAACAACCGCATCAATTCTGGGTGTGGTGAGCTGCAAAAGATCAGTTGAGACAGTACCAACGACGACAGGATCGAAGAATAGAATAAGGAGGGAAAATGTTTTGAAAAACAATAAAAAGAATAACGATAATAATAAAGTTGAAATTAGGGAAAAGGAAAAGGAAAGAAGAGTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGGAGAAGAACAATGA

Protein sequence

MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNESTSSSSSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTTTAHKTTASILGVVSCKRSVETVPTTTGSKNRIRRENVLKNNKKNNDNNKVEIREKEKERRVSHRRTFEWLKQLSHATFGEEQ*
Homology
BLAST of Chy11G187940 vs. ExPASy TrEMBL
Match: A0A0A0LPT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277620 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 220/231 (95.24%), Postives = 222/231 (96.10%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNESTSSSSSRSH 60
           MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLW RSESMD NNMLRFRNESTSSSSSRSH
Sbjct: 80  MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWCRSESMDGNNMLRFRNESTSSSSSRSH 139

Query: 61  YSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLG 120
           YSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLG
Sbjct: 140 YSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLG 199

Query: 121 LLRTPGMELHDLKTRTTTTTTT-----TAHKTTASILGVVSCKRSVETVPTTTGSKNRIR 180
           LLRTPGMELHDLKTRTTTTTTT     TAHKTTASILGVVSCKRSVETVPTTTGSKNRIR
Sbjct: 200 LLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVETVPTTTGSKNRIR 259

Query: 181 RENVLKNNKKNNDNNKVEIR--EKEKERRVSHRRTFEWLKQLSHATFGEEQ 225
           RENVL+NNKKNND+NKVEIR  EKEKERRVSHRRTFEWLKQLSHATFGEEQ
Sbjct: 260 RENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 310

BLAST of Chy11G187940 vs. ExPASy TrEMBL
Match: A0A1S3C7L1 (homeobox protein 6 OS=Cucumis melo OX=3656 GN=LOC103497383 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.3e-98
Identity = 213/232 (91.81%), Postives = 216/232 (93.10%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNESTSSSSSRSH 60
           MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRN STSSSSSRSH
Sbjct: 76  MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNGSTSSSSSRSH 135

Query: 61  YSRSSSLSNNSISIP-TNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRL 120
           YSRSSSLSNNSISIP TN+KPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRL
Sbjct: 136 YSRSSSLSNNSISIPTTNTKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRL 195

Query: 121 GLLRTPGMELHDLKTRTTTTTTT--TAHKTTASILGVVSCKRSVETVPTTTG-SKNRIRR 180
           GLLRTPGMELHDLKTRTTTTTTT  T HKTTASILGVVSCKRSV+TVPTTTG S NRIRR
Sbjct: 196 GLLRTPGMELHDLKTRTTTTTTTTMTTHKTTASILGVVSCKRSVDTVPTTTGSSNNRIRR 255

Query: 181 ENVLKNNKKNNDNNKVEIR----EKEKERRVSHRRTFEWLKQLSHATFGEEQ 225
           ENVL    K N+NNKVEIR    EKEKERRVSHRRTFEWLKQLSHATFGEEQ
Sbjct: 256 ENVL----KKNNNNKVEIREKEKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 303

BLAST of Chy11G187940 vs. ExPASy TrEMBL
Match: A0A6J1G7B7 (uncharacterized protein LOC111451408 OS=Cucurbita moschata OX=3662 GN=LOC111451408 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 4.0e-61
Identity = 161/243 (66.26%), Postives = 185/243 (76.13%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNN--NGNLWSRSESMDRNNMLRFRNESTSSS--S 60
           M  ADD+FFQGH+LPLRLS SS+N+ N+  +  L +RSESMD +NMLRFRN S+SSS  S
Sbjct: 60  MCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFRNGSSSSSSNS 119

Query: 61  SRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSH--RSRSSSRW 120
           SRSHYSR SS+SNNSISIPTNSKPR + NNVFHSHPSPTPQIRSFST     RSRSSSRW
Sbjct: 120 SRSHYSRCSSISNNSISIPTNSKPR-TQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW 179

Query: 121 EFFRLGLLRTPGMELHDLKTRTTTTTT--TTAHKTTASILGVVSCKRSVETVPT------ 180
           +FFR+GLLRTPGMELHDLKTRTT +    T   KTTAS LGVVSCK+SVET+P       
Sbjct: 180 DFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKN 239

Query: 181 ---TTGSKNRIRRENVLKNNKKNNDNNKVEIREKEKER--RVSHRRTFEWLKQLSHATFG 225
                G K   + + +    K+ NDN  VEIREKEKE+  R+SHRRTFEWLKQLSHATF 
Sbjct: 240 WSGNIGKKRNEKGKGIGIREKELNDN--VEIREKEKEKATRLSHRRTFEWLKQLSHATFA 298

BLAST of Chy11G187940 vs. ExPASy TrEMBL
Match: A0A6J1JCH9 (probable membrane-associated kinase regulator 1 OS=Cucurbita maxima OX=3661 GN=LOC111483795 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.2e-61
Identity = 156/233 (66.95%), Postives = 175/233 (75.11%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNN---NGNLWSRSESMDRNNMLRFRNESTSSSSS 60
           M  AD++FFQGH+LPL  SFSSENS NN     N  +RSES D   MLRFRN STSSSSS
Sbjct: 71  MCAADEVFFQGHILPLCHSFSSENSHNNPFFPRNSSTRSESSD---MLRFRNGSTSSSSS 130

Query: 61  RSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFF 120
           RSHYSRSSS+SNNSISIPTNSKPRP +NNVFHSHPSPTPQIRS STS  RSRSSSRW+FF
Sbjct: 131 RSHYSRSSSISNNSISIPTNSKPRP-HNNVFHSHPSPTPQIRSHSTSGRRSRSSSRWDFF 190

Query: 121 RLGLLRTPGMELHDLKTRTTTTT----TTTAHKTTASILGVVSCKRSVETVPTTTGSKNR 180
           RLGLLRTPGMELHDLKTRT +++    T  AH T  S LGVVSCK+SV+TV         
Sbjct: 191 RLGLLRTPGMELHDLKTRTNSSSAAAATPAAHTTAGSFLGVVSCKKSVDTVAAA------ 250

Query: 181 IRRENVLKNNKKNNDNNKVEIREKEKER--RVSHRRTFEWLKQLSHATFGEEQ 225
                     KK ++N K + +EKEKER  RVSHRRTFEW+KQLSHA+ G+EQ
Sbjct: 251 --------GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285

BLAST of Chy11G187940 vs. ExPASy TrEMBL
Match: A0A6J1F3H1 (probable membrane-associated kinase regulator 1 OS=Cucurbita moschata OX=3662 GN=LOC111439472 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.9e-61
Identity = 158/233 (67.81%), Postives = 172/233 (73.82%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNN---NGNLWSRSESMDRNNMLRFRNESTSSSSS 60
           M  AD++FFQGH+LPLR SFSSENS NN     N  +RSES D   MLRFRN STSSSSS
Sbjct: 71  MCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSD---MLRFRNGSTSSSSS 130

Query: 61  RSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFF 120
           RSHYSRSSSLSNNSISIPTNSKPRP +NNVFHSHPSPTPQIRS STS  RSRSSSRW+FF
Sbjct: 131 RSHYSRSSSLSNNSISIPTNSKPRP-HNNVFHSHPSPTPQIRSHSTSGRRSRSSSRWDFF 190

Query: 121 RLGLLRTPGMELHDLKTRT------TTTTTTTAHKTTASILGVVSCKRSVETVPTTTGSK 180
           RLGLLRTPGMELHDLKTRT      T   T  AH T  S LGVVSCK+SV+TV    G K
Sbjct: 191 RLGLLRTPGMELHDLKTRTNSSSSATAAATPAAHTTAGSFLGVVSCKKSVDTV-AAAGKK 250

Query: 181 NRIRRENVLKNNKKNNDNNKVEIREKEKERRVSHRRTFEWLKQLSHATFGEEQ 225
            R       +N K+N         EKE+  RVSHRRTFEW+KQLSHA+ G+EQ
Sbjct: 251 KR------SENGKEN---------EKERGTRVSHRRTFEWVKQLSHASSGDEQ 283

BLAST of Chy11G187940 vs. NCBI nr
Match: XP_011649316.1 (homeobox protein 6 [Cucumis sativus] >KGN61971.1 hypothetical protein Csa_006045 [Cucumis sativus])

HSP 1 Score: 393 bits (1010), Expect = 9.79e-136
Identity = 220/231 (95.24%), Postives = 222/231 (96.10%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNESTSSSSSRSH 60
           MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLW RSESMD NNMLRFRNESTSSSSSRSH
Sbjct: 80  MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWCRSESMDGNNMLRFRNESTSSSSSRSH 139

Query: 61  YSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLG 120
           YSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLG
Sbjct: 140 YSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRLG 199

Query: 121 LLRTPGMELHDLKTRTTTTTTTT-----AHKTTASILGVVSCKRSVETVPTTTGSKNRIR 180
           LLRTPGMELHDLKTRTTTTTTTT     AHKTTASILGVVSCKRSVETVPTTTGSKNRIR
Sbjct: 200 LLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVETVPTTTGSKNRIR 259

Query: 181 RENVLKNNKKNNDNNKVEIREKEKE--RRVSHRRTFEWLKQLSHATFGEEQ 224
           RENVL+NNKKNND+NKVEIREKEKE  RRVSHRRTFEWLKQLSHATFGEEQ
Sbjct: 260 RENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 310

BLAST of Chy11G187940 vs. NCBI nr
Match: XP_008457772.1 (PREDICTED: homeobox protein 6 [Cucumis melo])

HSP 1 Score: 368 bits (944), Expect = 8.47e-126
Identity = 213/232 (91.81%), Postives = 216/232 (93.10%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNESTSSSSSRSH 60
           MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRN STSSSSSRSH
Sbjct: 76  MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMDRNNMLRFRNGSTSSSSSRSH 135

Query: 61  YSRSSSLSNNSISIPT-NSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRL 120
           YSRSSSLSNNSISIPT N+KPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRL
Sbjct: 136 YSRSSSLSNNSISIPTTNTKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFFRL 195

Query: 121 GLLRTPGMELHDLKTRTTTTTTTT--AHKTTASILGVVSCKRSVETVPTTTGSKN-RIRR 180
           GLLRTPGMELHDLKTRTTTTTTTT   HKTTASILGVVSCKRSV+TVPTTTGS N RIRR
Sbjct: 196 GLLRTPGMELHDLKTRTTTTTTTTMTTHKTTASILGVVSCKRSVDTVPTTTGSSNNRIRR 255

Query: 181 ENVLKNNKKNNDNNKVEIREKEKE----RRVSHRRTFEWLKQLSHATFGEEQ 224
           ENVLK N    +NNKVEIREKEKE    RRVSHRRTFEWLKQLSHATFGEEQ
Sbjct: 256 ENVLKKN----NNNKVEIREKEKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 303

BLAST of Chy11G187940 vs. NCBI nr
Match: XP_038902148.1 (uncharacterized protein LOC120088781 [Benincasa hispida])

HSP 1 Score: 300 bits (767), Expect = 5.55e-99
Identity = 187/239 (78.24%), Postives = 193/239 (80.75%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNN------GNLWSRSESMDRNNMLRFRNESTSS 60
           M  AD+LFFQG MLPLRLSFSSENS NNN      GNLW RSESMD N MLRF N S+SS
Sbjct: 69  MFAADELFFQGQMLPLRLSFSSENSNNNNIHHLFGGNLWQRSESMDHN-MLRFGNGSSSS 128

Query: 61  SSSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRW 120
           SSSRSHYSRSSS+SNNS+SIPTNSK RP  N VFHSHPSPTPQIRSFS SSHRSRSSSRW
Sbjct: 129 SSSRSHYSRSSSVSNNSVSIPTNSKARPQKN-VFHSHPSPTPQIRSFSNSSHRSRSSSRW 188

Query: 121 EFFRLGLLRTPGMELHDLKTRTTTTTT-TTAHKTTASILGVVSCKRSVETVPTTTGSKNR 180
           EFFRLGLLRTPGMELHDLKTRTTT    TT HKTT SILGVVSCKRSV+TV TT  +KNR
Sbjct: 189 EFFRLGLLRTPGMELHDLKTRTTTAAAATTTHKTTTSILGVVSCKRSVDTVATTV-AKNR 248

Query: 181 IRRENVLKNNKKNNDNNKVEIREKEKE--------RRVSHRRTFEWLKQLSHATFGEEQ 224
            R ENV KNNKK      VEIREKEKE        RRVSHRRTFEWLKQLSHATFGEEQ
Sbjct: 249 -RNENVKKNNKK------VEIREKEKEKEKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 297

BLAST of Chy11G187940 vs. NCBI nr
Match: KAG6571253.1 (hypothetical protein SDJN03_30168, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249 bits (637), Expect = 1.79e-79
Identity = 155/230 (67.39%), Postives = 174/230 (75.65%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNN---GNLWSRSESMDRNNMLRFRNESTSSSSS 60
           M  AD++FFQGH+LPLR SFSSENS NN     N  +RSES D   MLRFRN STSSSSS
Sbjct: 71  MCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSD---MLRFRNGSTSSSSS 130

Query: 61  RSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFF 120
           RSHYSRSSS+SNNSISIPTNSKPR S+NNVFHSHPSPTPQIRS STS  RSRSSSRW+FF
Sbjct: 131 RSHYSRSSSISNNSISIPTNSKPR-SHNNVFHSHPSPTPQIRSHSTSGRRSRSSSRWDFF 190

Query: 121 RLGLLRTPGMELHDLKTRTTTTT---TTTAHKTTASILGVVSCKRSVETVPTTTGSKNRI 180
           RLGLLRTPGMELHDLKTRT + +   T  AH T  S LGVVSCK+SV+TV          
Sbjct: 191 RLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTV---------- 250

Query: 181 RRENVLKNNKKNNDNNKVEIREKEKERRVSHRRTFEWLKQLSHATFGEEQ 224
                    KK ++N K + +EKE+E RVSHRRTFEW+KQLSHA+ G+EQ
Sbjct: 251 ----AAAGKKKRSENGKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 282

BLAST of Chy11G187940 vs. NCBI nr
Match: KAG7020165.1 (hypothetical protein SDJN02_16847 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248 bits (633), Expect = 7.69e-79
Identity = 157/232 (67.67%), Postives = 175/232 (75.43%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNN---GNLWSRSESMDRNNMLRFRNESTSSSSS 60
           M  AD++FFQGH+LPLR SFSSENS NN     N  +RSES D   MLRFRN STSSSSS
Sbjct: 71  MCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSD---MLRFRNGSTSSSSS 130

Query: 61  RSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRSSSRWEFF 120
           RSHYSRSSS+SNNSISIPTNSKPR S+NNVFHSHPSPTPQIRS STS  RSRSSSRW+FF
Sbjct: 131 RSHYSRSSSISNNSISIPTNSKPR-SHNNVFHSHPSPTPQIRSHSTSGRRSRSSSRWDFF 190

Query: 121 RLGLLRTPGMELHDLKTRTTTTT---TTTAHKTTASILGVVSCKRSVETVPTTTGSKNRI 180
           RLGLLRTPGMELHDLKTRT + +   T  AH T  S LGVVSCK+SV+TV          
Sbjct: 191 RLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTV---------- 250

Query: 181 RRENVLKNNKKNNDNNKVEIREKEKER--RVSHRRTFEWLKQLSHATFGEEQ 224
                    KK ++N K + +EKEKER  RVSHRRTFEW+KQLSHA+ G+EQ
Sbjct: 251 ----AAAGKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 284

BLAST of Chy11G187940 vs. TAIR 10
Match: AT5G67350.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 70/243 (28.81%), Postives = 108/243 (44.44%), Query Frame = 0

Query: 1   MLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWSRSESMD--RNNMLRFRNESTSSSSSR 60
           M TAD+LFF+G +LPLR S S +   N    L +RSES++  R  ++R            
Sbjct: 83  MSTADELFFKGRILPLRHSVSLDAGLNEPTRLITRSESVEFRRTGIIR------------ 142

Query: 61  SHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHR------SRSSS 120
                              S  +  NN + +S PSP PQIR  S+ + R       +SSS
Sbjct: 143 -------------------SDRKIKNNFIDYSQPSPQPQIRRSSSMTARVNSIRNPKSSS 202

Query: 121 RWEFFRLGLLRTPGMELH------DLKTRTTTTTTTTAHKTTASILG------------- 180
            W+F RLGL+RTP +EL        L     ++ ++T+  + +  +G             
Sbjct: 203 IWDFLRLGLVRTPEIELRTTAGNAKLSVSRNSSCSSTSTSSNSKKIGSGESRSRNRRRSF 262

Query: 181 -VVSCKRSVETVPTTTGSKNRIRRENVLKNNKKNNDNNKVEIREKEKERRVSHRRTFEWL 216
               CK SV T   T  +  +I+  +     K+     K    +KE++  ++ +RTFEWL
Sbjct: 263 MFSDCKCSVST--ETKMAPVKIKVSSGETEEKQRMMEKKT--AKKEEKSAMARKRTFEWL 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LPT61.2e-10595.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277620 PE=4 SV=1[more]
A0A1S3C7L15.3e-9891.81homeobox protein 6 OS=Cucumis melo OX=3656 GN=LOC103497383 PE=4 SV=1[more]
A0A6J1G7B74.0e-6166.26uncharacterized protein LOC111451408 OS=Cucurbita moschata OX=3662 GN=LOC1114514... [more]
A0A6J1JCH95.2e-6166.95probable membrane-associated kinase regulator 1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1F3H18.9e-6167.81probable membrane-associated kinase regulator 1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_011649316.19.79e-13695.24homeobox protein 6 [Cucumis sativus] >KGN61971.1 hypothetical protein Csa_006045... [more]
XP_008457772.18.47e-12691.81PREDICTED: homeobox protein 6 [Cucumis melo][more]
XP_038902148.15.55e-9978.24uncharacterized protein LOC120088781 [Benincasa hispida][more]
KAG6571253.11.79e-7967.39hypothetical protein SDJN03_30168, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020165.17.69e-7967.67hypothetical protein SDJN02_16847 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
AT5G67350.11.4e-0528.81unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..106
NoneNo IPR availablePANTHERPTHR33922OS01G0888066 PROTEIN-RELATEDcoord: 1..219
NoneNo IPR availablePANTHERPTHR33922:SF2OS01G0888066 PROTEINcoord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G187940.1Chy11G187940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding