Chy11G186280 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCAAATCCAATTCGCAAGAGTAAGTCTCTCTCTCTCTCTTTCAAAATTATTTTCACTATTTTATATTTGTTTGCTTTATTTTTAGATTTAGTGATTGAATTTGGTGTTTTATATATATATATACATATATATATAGCTCATCATTATTTTTTCTGAATTATGATCAATTTGGATTAATATATATTTCAGGAAGCAGCACTTTATGTAATGAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGTAATTACTATTAATTAGATACAAATATAAAAATTATTTTTGGTATTACCCAATATATATAATTTGAGGTGTGAATAAATTGGGTGGAAAATAATGGGTGCAGGGCTTACAACCAGTGGAATGTAAAGCAATTATGGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAGATTGATGAGTCGTTACCACCTTTTTATCAACTTAGAGACATTGTCTCTGCCCCTTTCTAG ATGCATCAAATCCAATTCGCAAGAGAAGCAGCACTTTATGTAATGAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGGCTTACAACCAGTGGAATGTAAAGCAATTATGGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAGATTGATGAGTCGTTACCACCTTTTTATCAACTTAGAGACATTGTCTCTGCCCCTTTCTAG ATGCATCAAATCCAATTCGCAAGAGAAGCAGCACTTTATGTAATGAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGGCTTACAACCAGTGGAATGTAAAGCAATTATGGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAGATTGATGAGTCGTTACCACCTTTTTATCAACTTAGAGACATTGTCTCTGCCCCTTTCTAG MHQIQFAREAALYVMNTTTIEEAMKIFTEGLQPVECKAIMEDKDSIMKNWYHDEEIDESLPPFYQLRDIVSAPF* Homology
BLAST of Chy11G186280 vs. ExPASy TrEMBL
Match: A0A0A0LQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of Chy11G186280 vs. ExPASy TrEMBL
Match: A0A1S3CDH2 (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.7e-27 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Chy11G186280 vs. ExPASy TrEMBL
Match: A0A6J1G887 (uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC111451648 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.3e-20 Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of Chy11G186280 vs. ExPASy TrEMBL
Match: A0A6J1DBC1 (uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018915 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.4e-16 Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of Chy11G186280 vs. ExPASy TrEMBL
Match: A0A2G9GJS3 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21929 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.5e-09 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Chy11G186280 vs. NCBI nr
Match: XP_011649401.1 (uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_006615 [Cucumis sativus]) HSP 1 Score: 149 bits (376), Expect = 5.46e-45 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of Chy11G186280 vs. NCBI nr
Match: XP_008460897.1 (PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]) HSP 1 Score: 131 bits (330), Expect = 5.69e-38 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Chy11G186280 vs. NCBI nr
Match: XP_038902606.1 (uncharacterized protein LOC120089256 [Benincasa hispida]) HSP 1 Score: 119 bits (297), Expect = 5.78e-33 Identity = 62/74 (83.78%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of Chy11G186280 vs. NCBI nr
Match: XP_023512402.1 (uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo] >KAG7011119.1 hypothetical protein SDJN02_27917, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118 bits (296), Expect = 8.45e-33 Identity = 55/74 (74.32%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Chy11G186280 vs. NCBI nr
Match: KAG6571348.1 (hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117 bits (292), Expect = 4.61e-32 Identity = 54/74 (72.97%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Chy11G186280 vs. TAIR 10
Match: AT4G33467.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04 Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Chy11G186280 vs. TAIR 10
Match: AT4G33467.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 2.5e-04 Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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