Chy10G185280 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G185280
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ubiquitin-conjugating enzyme E2 C
Location	chrH10: 17654952 .. 17656752 (-)
RNA-Seq Expression	Chy10G185280
Synteny	Chy10G185280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTCAGACCCAATCCGACACCCGAAAACTCGTCCATGTCGCAGCATCATCATCTAATCAGTTCTTCATTAAAGCAGCCTGCCGCTTCTTCCAATCCTATCGATTCCAACGCTGTTGCGCAGAGGTGATTCTTCTTTTTCATCATTCTTTTGGTTTATTCATTGTTTCGTTCCCGGGATTTGTGGAGAATGTAAATAATGGACAAGAAAGGATTGAAAACGACAGCAAGAATTCAGGGACGTACGATTTGTTGTTACTTTCTAGTTTTTTTTTTTACACTATTCTGTTATGTTAATTATTGCTTGCTTTTCCATGTTTTGATTTGATTATCAAATCTGTAGCAGGCTTCAGATTTACGGATTCTTATTAATTGCGGATTATAGTTATGGGGTTTTGACATTTTTTTCTTTATTTGGCTGCAGGCTGCAAAAGGAGTTGATGTCACTGATGGTATGTTTCTTTCTGCTTTTACATTTCTTCTTGAATTTTTGGTATTATAGGGTCGTCTTGAGTACATCCATGTCATTTAAGTTGGTTGAAACATTGAGATTTGAGAATAAGCAATTTTGGATTTCTCCCTGCAGAGTGGGGACTGATTTAATTTGGTGGTCAATATGACCAGATTTCGAAAATATGTAATTTTACTGCTCTTCCCTTTTGTTGTGGCATCATGGTCCCATCCACAATCCCTGATTTCTTTTTAGAGTAAGTGTAGTTTGTCCCCCTCGTTGGTTCTTCGAACTTTCACATTCTGTTTTGGCAGATACCATGTTCTTGATATCATGTATTCAAGATCATTAGGCAAATAATGGCATCTTGGATTTTCAACTTTGCATTTCTTTGTATTTGATAATGCTGAATATTTGTTTCTTCTTGTTATGCCATAATATTGTGTTATCTTTACTAGGTTTGTTGTCTTCTAGAAAGATCATTCCTGGTTGTTGAATGGGGTTTTGCAGCCATGAGATGGTTATAAATTGCCTGTCTTCTGGATAGTTCATTAACCATATTTGTTTGGTGATGCTCTCTACTACGCAGATGAGTGGAGGTGATCTAGGTGTATCGGCTTTTCCAGATGGTGAGAGCATTTTCACATGGATAGGCACCATTGAGGGTGGGAAAGGAACTTCATACGAGGGTTTGTCCTACAAACTCTCCTTACATTTTCCGATGGAGTACCCTTTCAAGCCACCTCTTGTTAAGTTCGAGACGATGTGCTTCCATCCAAATGTTGATCAATATGGCAACATTTGTCTTGATATTCTTCAGGTTTCAGTTAAATATACAGTGGTGTTTTTGCTTCCCTATGTTTTGGATGGTTATTGTACAATCCATATTCTTTGTTGTTGTTTAGTATTGAAGTTTGTTAGGGTGAATAACACACCATAGACAGTTTAGTTGGTTTTTCGAACCTCATCCTTATATTTGATGTAATTTCCTCTTTTTTGATAGGACAAGTGGTCTTCCGCTTATGATTGCAGAACCATCCTTTTGTCTATTCAAAGCCTATTAGGAGGTTTGCTCGTTCCTGCCAACAAATTTGTCAATTTTCTATTTTTGATCCTCTCACTCTGATGAAGTGTTGTGTTTCCTTGCAGAGCCCAACCCAGAGAGTCCTCTCAACAGTTATGCTGCTGCTCTGTGGAATAACAAGGAAGGTTGGACTCAAGTCCCTCCCTTGTGTCCCATCATTTGTTTTAATGGCGATTCTTTTCTGATCATTTATTTTCTTGTTGTCCAGATTACAGGAAGATGGTCCACAAACAGTATTTTTCTGGTGCAGTCTTAGACGGCTGA

mRNA sequence

ATGGAAGTCAGACCCAATCCGACACCCGAAAACTCGTCCATGTCGCAGCATCATCATCTAATCAGTTCTTCATTAAAGCAGCCTGCCGCTTCTTCCAATCCTATCGATTCCAACGCTGTTGCGCAGAGGCTGCAAAAGGAGTTGATGTCACTGATGATGAGTGGAGGTGATCTAGGTGTATCGGCTTTTCCAGATGGTGAGAGCATTTTCACATGGATAGGCACCATTGAGGGTGGGAAAGGAACTTCATACGAGGGTTTGTCCTACAAACTCTCCTTACATTTTCCGATGGAGTACCCTTTCAAGCCACCTCTTGTTAAGTTCGAGACGATGTGCTTCCATCCAAATGTTGATCAATATGGCAACATTTGTCTTGATATTCTTCAGGACAAGTGGTCTTCCGCTTATGATTGCAGAACCATCCTTTTGTCTATTCAAAGCCTATTAGGAGAGCCCAACCCAGAGAGTCCTCTCAACAGTTATGCTGCTGCTCTGTGGAATAACAAGGAAGATTACAGGAAGATGGTCCACAAACAGTATTTTTCTGGTGCAGTCTTAGACGGCTGA

Coding sequence (CDS)

ATGGAAGTCAGACCCAATCCGACACCCGAAAACTCGTCCATGTCGCAGCATCATCATCTAATCAGTTCTTCATTAAAGCAGCCTGCCGCTTCTTCCAATCCTATCGATTCCAACGCTGTTGCGCAGAGGCTGCAAAAGGAGTTGATGTCACTGATGATGAGTGGAGGTGATCTAGGTGTATCGGCTTTTCCAGATGGTGAGAGCATTTTCACATGGATAGGCACCATTGAGGGTGGGAAAGGAACTTCATACGAGGGTTTGTCCTACAAACTCTCCTTACATTTTCCGATGGAGTACCCTTTCAAGCCACCTCTTGTTAAGTTCGAGACGATGTGCTTCCATCCAAATGTTGATCAATATGGCAACATTTGTCTTGATATTCTTCAGGACAAGTGGTCTTCCGCTTATGATTGCAGAACCATCCTTTTGTCTATTCAAAGCCTATTAGGAGAGCCCAACCCAGAGAGTCCTCTCAACAGTTATGCTGCTGCTCTGTGGAATAACAAGGAAGATTACAGGAAGATGGTCCACAAACAGTATTTTTCTGGTGCAGTCTTAGACGGCTGA

Protein sequence

MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQYFSGAVLDG*

Homology

[Close]

BLAST of Chy10G185280 vs. ExPASy Swiss-Prot
Match: Q8L7T3 (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-57
Identity = 109/159 (68.55%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 22  SSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKG 81
           S+  KQPAA +  +DS +V +RLQ ELM LMM GG  G+SAFP+ ++IF W GTI G K 
Sbjct: 18  SNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGP-GISAFPEEDNIFCWKGTITGSKD 77

Query: 82  TSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTI 141
           T +EG  Y+LSL F  +YPFKPP VKFET CFHPNVD YGNICLDILQDKWSSAYD RTI
Sbjct: 78  TVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTI 137

Query: 142 LLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 181
           LLSIQSLLGEPN  SPLN+ AA LW+N+E+YRKMV K Y
Sbjct: 138 LLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 175

[Close]

BLAST of Chy10G185280 vs. ExPASy Swiss-Prot
Match: Q9LJZ5 (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 26  KQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYE 85
           KQ A  +  +DS++V +RLQ ELM LMM G D G+SAFP+ ++IF W GTI G K T +E
Sbjct: 23  KQSAPPTKTVDSHSVLKRLQSELMGLMM-GADPGISAFPEEDNIFCWKGTITGSKDTVFE 82

Query: 86  GLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSI 145
           G  Y+LSL F  +YPFK P VKFET CFHPNVD YGNICLDILQDKWSSAYD RTILLSI
Sbjct: 83  GTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSI 142

Query: 146 QSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 181
           QSLLGEPN  SPLN+ AA LW+N+E+YRKMV K Y
Sbjct: 143 QSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLY 176

[Close]

BLAST of Chy10G185280 vs. ExPASy Swiss-Prot
Match: Q54XS6 (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 GN=ube2c PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.2e-53
Identity = 93/143 (65.03%), Postives = 121/143 (84.62%), Query Frame = 0


Query: 38  NAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPM 97
           ++V++RLQ ELM+LMM G   G+SAFPDG++IF WIGTI+G K T YE + +K+SL FP 
Sbjct: 5   HSVSKRLQSELMNLMM-GPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPT 64

Query: 98  EYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESP 157
           +YP+KPP VKFET CFHPNVD  GNICLDIL+DKWS  Y+ R++L+SIQSLLGEPN ESP
Sbjct: 65  DYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESP 124

Query: 158 LNSYAAALWNNKEDYRKMVHKQY 181
           LNSYAA+LW+N+++Y+K++ K+Y
Sbjct: 125 LNSYAASLWSNQDEYKKVLDKRY 146

[Close]

BLAST of Chy10G185280 vs. ExPASy Swiss-Prot
Match: P56616 (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis OX=8355 GN=ube2c PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-51
Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 39  AVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPME 98
           +V +RLQ+ELM+LMMS GD G+SAFP+ +++F WIGTI+G  GT YE L YKLSL FP  
Sbjct: 30  SVGKRLQQELMTLMMS-GDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSG 89

Query: 99  YPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 158
           YP+  P VKF T CFHPNVD +GNICLDIL+DKWS+ YD RTILLS+QSLLGEPN ESPL
Sbjct: 90  YPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPL 149

Query: 159 NSYAAALWNNKEDYRKMVHKQY 181
           N YAA LW N+  Y+K +H+QY
Sbjct: 150 NPYAAELWQNQTAYKKHLHEQY 170

[Close]

BLAST of Chy10G185280 vs. ExPASy Swiss-Prot
Match: Q95044 (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima OX=6584 GN=UBE2C PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-49
Identity = 86/155 (55.48%), Postives = 126/155 (81.29%), Query Frame = 0


Query: 26  KQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYE 85
           ++P   +   + ++V++RLQ+EL +L+MS GD G++AFPDG+++F W+ T++G K T YE
Sbjct: 17  ERPRDMTTSKERHSVSKRLQQELRTLLMS-GDPGITAFPDGDNLFKWVATLDGPKDTVYE 76

Query: 86  GLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSI 145
            L YKL+L FP +YP+KPP+VKF T C+HPNVDQ GNICLDIL++ W+++YD RTILLS+
Sbjct: 77  SLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSL 136

Query: 146 QSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 181
           QSLLGEPN  SPLN+ AA +W+N+ +Y+K++H++Y
Sbjct: 137 QSLLGEPNNASPLNAQAADMWSNQTEYKKVLHEKY 170

[Close]

BLAST of Chy10G185280 vs. ExPASy TrEMBL
Match: A0A0A0KV09 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623460 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 4.9e-105
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 189
           FSGAVLDG
Sbjct: 181 FSGAVLDG 188

[Close]

BLAST of Chy10G185280 vs. ExPASy TrEMBL
Match: A0A5D3CDL5 (Putative ubiquitin-conjugating enzyme E2 C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002790 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.1e-104
Identity = 185/188 (98.40%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPTPENSS+SQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTPENSSVSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFPDGESIFTWIGTI+GGKGT+YEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPDGESIFTWIGTIQGGKGTTYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 189
           FSGAVLDG
Sbjct: 181 FSGAVLDG 188

[Close]

BLAST of Chy10G185280 vs. ExPASy TrEMBL
Match: A0A1S3BH18 (probable ubiquitin-conjugating enzyme E2 C OS=Cucumis melo OX=3656 GN=LOC103489475 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.1e-104
Identity = 185/188 (98.40%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPTPENSS+SQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTPENSSVSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFPDGESIFTWIGTI+GGKGT+YEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPDGESIFTWIGTIQGGKGTTYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 189
           FSGAVLDG
Sbjct: 181 FSGAVLDG 188

[Close]

BLAST of Chy10G185280 vs. ExPASy TrEMBL
Match: A0A6J1CBM1 (probable ubiquitin-conjugating enzyme E2 C OS=Momordica charantia OX=3673 GN=LOC111010030 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.5e-96
Identity = 174/188 (92.55%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPT +NSS+ Q HHL +S LKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTADNSSIPQ-HHLTTSPLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFP+GESIFTWIGTIEGGKGT+YEGLSYKLSL+FPM+YPFKPPLVKFET+CFHPNVDQY
Sbjct: 61  SAFPEGESIFTWIGTIEGGKGTAYEGLSYKLSLNFPMDYPFKPPLVKFETLCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNN EDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNTEDYRKMVHKQY 180

Query: 181 FSGAVLDG 189
           FSGAVLDG
Sbjct: 181 FSGAVLDG 187

[Close]

BLAST of Chy10G185280 vs. ExPASy TrEMBL
Match: A0A6J1HTY4 (probable ubiquitin-conjugating enzyme E2 C isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466553 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.9e-95
Identity = 174/188 (92.55%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPT +NSS+SQ  HL SSSLKQP+ASSNPIDSNAVAQRLQKELMSLMMSG DLGV
Sbjct: 1   MEVRPNPTGDNSSISQ-QHLTSSSLKQPSASSNPIDSNAVAQRLQKELMSLMMSGDDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFP+GESIFTWIGTIEGGKGT+YEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPEGESIFTWIGTIEGGKGTAYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGE NPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGESNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 189
           F GAV +G
Sbjct: 181 FLGAVTEG 187

[Close]

BLAST of Chy10G185280 vs. NCBI nr
Match: XP_004142430.1 (probable ubiquitin-conjugating enzyme E2 C isoform X1 [Cucumis sativus] >KGN52282.1 hypothetical protein Csa_008141 [Cucumis sativus])

HSP 1 Score: 389 bits (998), Expect = 2.02e-136
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 188
           FSGAVLDG
Sbjct: 181 FSGAVLDG 188

[Close]

BLAST of Chy10G185280 vs. NCBI nr
Match: XP_008446898.1 (PREDICTED: probable ubiquitin-conjugating enzyme E2 C [Cucumis melo] >KAA0034731.1 putative ubiquitin-conjugating enzyme E2 C [Cucumis melo var. makuwa] >TYK09284.1 putative ubiquitin-conjugating enzyme E2 C [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (988), Expect = 6.76e-135
Identity = 185/188 (98.40%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPTPENSS+SQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTPENSSVSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFPDGESIFTWIGTI+GGKGT+YEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPDGESIFTWIGTIQGGKGTTYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 188
           FSGAVLDG
Sbjct: 181 FSGAVLDG 188

[Close]

BLAST of Chy10G185280 vs. NCBI nr
Match: XP_038893450.1 (probable ubiquitin-conjugating enzyme E2 C isoform X1 [Benincasa hispida])

HSP 1 Score: 372 bits (954), Expect = 9.99e-130
Identity = 182/188 (96.81%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPT +NSSM QH HLISS LKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTSDNSSMLQH-HLISSPLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFPDGESIFTWIGTIEGGKGT+YEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPDGESIFTWIGTIEGGKGTTYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 188
           FSGAVLDG
Sbjct: 181 FSGAVLDG 187

[Close]

BLAST of Chy10G185280 vs. NCBI nr
Match: KAG6573830.1 (Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012897.1 Ubiquitin-conjugating enzyme E2 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360 bits (923), Expect = 5.33e-125
Identity = 176/188 (93.62%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPT +NSS+SQ  HL SSSLKQP+ASSNPIDSNAVAQRLQKELMSLMMSG DLGV
Sbjct: 1   MEVRPNPTGDNSSISQQ-HLTSSSLKQPSASSNPIDSNAVAQRLQKELMSLMMSGDDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFP+GESIFTWIGTIEGGKGT+YEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY
Sbjct: 61  SAFPEGESIFTWIGTIEGGKGTAYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGE NPESPLNSYAAALWNNKEDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGESNPESPLNSYAAALWNNKEDYRKMVHKQY 180

Query: 181 FSGAVLDG 188
           FSGAV+DG
Sbjct: 181 FSGAVMDG 187

[Close]

BLAST of Chy10G185280 vs. NCBI nr
Match: XP_022138984.1 (probable ubiquitin-conjugating enzyme E2 C [Momordica charantia])

HSP 1 Score: 358 bits (920), Expect = 1.53e-124
Identity = 174/188 (92.55%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   MEVRPNPTPENSSMSQHHHLISSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60
           MEVRPNPT +NSS+ QH HL +S LKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV
Sbjct: 1   MEVRPNPTADNSSIPQH-HLTTSPLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGV 60

Query: 61  SAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQY 120
           SAFP+GESIFTWIGTIEGGKGT+YEGLSYKLSL+FPM+YPFKPPLVKFET+CFHPNVDQY
Sbjct: 61  SAFPEGESIFTWIGTIEGGKGTAYEGLSYKLSLNFPMDYPFKPPLVKFETLCFHPNVDQY 120

Query: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 180
           GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNN EDYRKMVHKQY
Sbjct: 121 GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNTEDYRKMVHKQY 180

Query: 181 FSGAVLDG 188
           FSGAVLDG
Sbjct: 181 FSGAVLDG 187

[Close]

BLAST of Chy10G185280 vs. TAIR 10
Match: AT1G50490.1 (ubiquitin-conjugating enzyme 20 )

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58
Identity = 109/159 (68.55%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 22  SSSLKQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKG 81
           S+  KQPAA +  +DS +V +RLQ ELM LMM GG  G+SAFP+ ++IF W GTI G K 
Sbjct: 18  SNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGP-GISAFPEEDNIFCWKGTITGSKD 77

Query: 82  TSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTI 141
           T +EG  Y+LSL F  +YPFKPP VKFET CFHPNVD YGNICLDILQDKWSSAYD RTI
Sbjct: 78  TVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTI 137

Query: 142 LLSIQSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 181
           LLSIQSLLGEPN  SPLN+ AA LW+N+E+YRKMV K Y
Sbjct: 138 LLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 175

[Close]

BLAST of Chy10G185280 vs. TAIR 10
Match: AT3G20060.1 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 214.2 bits (544), Expect = 9.3e-56
Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 26  KQPAASSNPIDSNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYE 85
           KQ A  +  +DS++V +RLQ ELM LMM G D G+SAFP+ ++IF W GTI G K T +E
Sbjct: 23  KQSAPPTKTVDSHSVLKRLQSELMGLMM-GADPGISAFPEEDNIFCWKGTITGSKDTVFE 82

Query: 86  GLSYKLSLHFPMEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSI 145
           G  Y+LSL F  +YPFK P VKFET CFHPNVD YGNICLDILQDKWSSAYD RTILLSI
Sbjct: 83  GTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSI 142

Query: 146 QSLLGEPNPESPLNSYAAALWNNKEDYRKMVHKQY 181
           QSLLGEPN  SPLN+ AA LW+N+E+YRKMV K Y
Sbjct: 143 QSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLY 176

[Close]

BLAST of Chy10G185280 vs. TAIR 10
Match: AT3G20060.2 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 195.3 bits (495), Expect = 4.5e-50
Identity = 94/132 (71.21%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 49  MSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKF 108
           M LMM G D G+SAFP+ ++IF W GTI G K T +EG  Y+LSL F  +YPFK P VKF
Sbjct: 1   MGLMM-GADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKF 60

Query: 109 ETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNN 168
           ET CFHPNVD YGNICLDILQDKWSSAYD RTILLSIQSLLGEPN  SPLN+ AA LW+N
Sbjct: 61  ETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSN 120

Query: 169 KEDYRKMVHKQY 181
           +E+YRKMV K Y
Sbjct: 121 QEEYRKMVEKLY 131

[Close]

BLAST of Chy10G185280 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-28
Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 58  LGVSAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFPMEYPFKPPLVKFETMCFHPNV 117
           +G+S  P   +I  W   I G + T ++G ++KL+LHF  +YP KPP+V+F +  FHPN+
Sbjct: 22  VGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNI 81

Query: 118 DQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWN-NKEDYRKMV 177
              G+ICLDILQ++WS  YD   +L SIQSLL +PNP+SP N+ AA L++ NK +Y + V
Sbjct: 82  YADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKV 141

[Close]

BLAST of Chy10G185280 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 37  SNAVAQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTSYEGLSYKLSLHFP 96
           S    +RL ++   L       G+S  P   +I  W   I G   T ++G ++KLSL F 
Sbjct: 2   STPARKRLMRDFKRLQQD-PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 61

Query: 97  MEYPFKPPLVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPES 156
            +YP KPP V+F +  FHPN+   G+ICLDILQ++WS  YD   IL SIQSLL +PNP S
Sbjct: 62  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 121

Query: 157 PLNSYAAALWN-NKEDYRKMV 177
           P NS AA +++ +K +Y + V
Sbjct: 122 PANSEAARMYSESKREYNRRV 141

The following BLAST results are available for this feature:

BLAST of Chy10G185280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7T3	1.7e-57	68.55	Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2...	[more]
Q9LJZ5	1.3e-54	67.74	Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1...	[more]
Q54XS6	7.2e-53	65.03	Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 ...	[more]
P56616	1.0e-51	66.90	Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis OX=8355 GN=ube2c PE=1 SV=1	[more]
Q95044	1.7e-49	55.48	Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima OX=6584 GN=UBE2C PE=1 S...	[more]

BLAST of Chy10G185280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV09	4.9e-105	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623460 PE...	[more]
A0A5D3CDL5	7.1e-104	98.40	Putative ubiquitin-conjugating enzyme E2 C OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BH18	7.1e-104	98.40	probable ubiquitin-conjugating enzyme E2 C OS=Cucumis melo OX=3656 GN=LOC1034894...	[more]
A0A6J1CBM1	5.5e-96	92.55	probable ubiquitin-conjugating enzyme E2 C OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1HTY4	7.9e-95	92.55	probable ubiquitin-conjugating enzyme E2 C isoform X2 OS=Cucurbita maxima OX=366...	[more]

BLAST of Chy10G185280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142430.1	2.02e-136	100.00	probable ubiquitin-conjugating enzyme E2 C isoform X1 [Cucumis sativus] >KGN5228...	[more]
XP_008446898.1	6.76e-135	98.40	PREDICTED: probable ubiquitin-conjugating enzyme E2 C [Cucumis melo] >KAA0034731...	[more]
XP_038893450.1	9.99e-130	96.81	probable ubiquitin-conjugating enzyme E2 C isoform X1 [Benincasa hispida]	[more]
KAG6573830.1	5.33e-125	93.62	Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022138984.1	1.53e-124	92.55	probable ubiquitin-conjugating enzyme E2 C [Momordica charantia]	[more]

BLAST of Chy10G185280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50490.1	1.2e-58	68.55	ubiquitin-conjugating enzyme 20	[more]
AT3G20060.1	9.3e-56	67.74	ubiquitin-conjugating enzyme19	[more]
AT3G20060.2	4.5e-50	71.21	ubiquitin-conjugating enzyme19	[more]
AT5G62540.1	3.7e-28	47.50	ubiquitin-conjugating enzyme 3	[more]
AT1G14400.1	1.2e-26	43.26	ubiquitin carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 42..185 e-value: 3.9E-54 score: 195.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR24068:SF320	UBIQUITIN-CONJUGATING ENZYME E2 C-RELATED	coord: 22..183
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 22..183
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 33..182 e-value: 1.5E-53 score: 182.6
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 36..184
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 43..178 e-value: 7.0E-43 score: 145.6
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 39..185 score: 44.233414
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 42..176 e-value: 3.99564E-60 score: 182.017
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 113..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G185280.1	Chy10G185280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity