
Chy10G185220 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAAAGGTTTTCAATTTTTGCTTTTATTTTTATTTTTGTGTTTCTTCATGTCACAAATTTGACTTTTGCACAAGATGCATCTCCTCCACCACCATCCAACGCAACTGAATCTCCACCTCCCCCGCCACCATCCAACGCCACAGACACTCCGCCTCCCCCGCCGCCATCCAACGCCACTGACACTCCGCCTCCCCCGCCGCCATCCAACTCCACTGACGCTCCGCCTCCACCGCCACCATCCAATGCCACTGACGCTCCGCCTCCACCGCCACCATCCAACGCCACTGACACTCCACCTCCACCGCCGCCATCCAACGCCACTAATACTCCGCCTCCACCGCCGCCATCCAACGCCACTGACACTCCGCCTCCACCACCGCCATCCAACGCAACTGATAGTCCACCACCGCCGCCATCCAACACAACCGGCACTCCCCCACCCCCATCCCCATCCAATACAACCAACTCCCCACCACCACCACCTAATTCCACCGTTAACTTACCACCTGCACCGCCGCCTAACTTGGGTTCATCTCCACCACCGTCGCCAACGCCGAATGAAGCATTGAAGGAAAAGGGTGGTGGAGGTTCAAAAGGATTGAGCGGGGGACAAAAGGCAGGGATTGCATTTGGAGTGATCATAGGAGTAGGTTTGTTGGGATTTGTAGGATTAATTTGTATCAAACGTCGTAGTAATGCAAGAAGAAGCAGTTATGGATATGCTGCAAGAGACTCAATCCTTTAA ATGGCTAAAAGGTTTTCAATTTTTGCTTTTATTTTTATTTTTGTGTTTCTTCATGTCACAAATTTGACTTTTGCACAAGATGCATCTCCTCCACCACCATCCAACGCAACTGAATCTCCACCTCCCCCGCCACCATCCAACGCCACAGACACTCCGCCTCCCCCGCCGCCATCCAACGCCACTGACACTCCGCCTCCCCCGCCGCCATCCAACTCCACTGACGCTCCGCCTCCACCGCCACCATCCAATGCCACTGACGCTCCGCCTCCACCGCCACCATCCAACGCCACTGACACTCCACCTCCACCGCCGCCATCCAACGCCACTAATACTCCGCCTCCACCGCCGCCATCCAACGCCACTGACACTCCGCCTCCACCACCGCCATCCAACGCAACTGATAGTCCACCACCGCCGCCATCCAACACAACCGGCACTCCCCCACCCCCATCCCCATCCAATACAACCAACTCCCCACCACCACCACCTAATTCCACCGTTAACTTACCACCTGCACCGCCGCCTAACTTGGGTTCATCTCCACCACCGTCGCCAACGCCGAATGAAGCATTGAAGGAAAAGGGTGGTGGAGGTTCAAAAGGATTGAGCGGGGGACAAAAGGCAGGGATTGCATTTGGAGTGATCATAGGAGTAGGTTTGTTGGGATTTGTAGGATTAATTTGTATCAAACGTCGTAGTAATGCAAGAAGAAGCAGTTATGGATATGCTGCAAGAGACTCAATCCTTTAA ATGGCTAAAAGGTTTTCAATTTTTGCTTTTATTTTTATTTTTGTGTTTCTTCATGTCACAAATTTGACTTTTGCACAAGATGCATCTCCTCCACCACCATCCAACGCAACTGAATCTCCACCTCCCCCGCCACCATCCAACGCCACAGACACTCCGCCTCCCCCGCCGCCATCCAACGCCACTGACACTCCGCCTCCCCCGCCGCCATCCAACTCCACTGACGCTCCGCCTCCACCGCCACCATCCAATGCCACTGACGCTCCGCCTCCACCGCCACCATCCAACGCCACTGACACTCCACCTCCACCGCCGCCATCCAACGCCACTAATACTCCGCCTCCACCGCCGCCATCCAACGCCACTGACACTCCGCCTCCACCACCGCCATCCAACGCAACTGATAGTCCACCACCGCCGCCATCCAACACAACCGGCACTCCCCCACCCCCATCCCCATCCAATACAACCAACTCCCCACCACCACCACCTAATTCCACCGTTAACTTACCACCTGCACCGCCGCCTAACTTGGGTTCATCTCCACCACCGTCGCCAACGCCGAATGAAGCATTGAAGGAAAAGGGTGGTGGAGGTTCAAAAGGATTGAGCGGGGGACAAAAGGCAGGGATTGCATTTGGAGTGATCATAGGAGTAGGTTTGTTGGGATTTGTAGGATTAATTTGTATCAAACGTCGTAGTAATGCAAGAAGAAGCAGTTATGGATATGCTGCAAGAGACTCAATCCTTTAA MAKRFSIFAFIFIFVFLHVTNLTFAQDASPPPPSNATESPPPPPPSNATDTPPPPPPSNATDTPPPPPPSNSTDAPPPPPPSNATDAPPPPPPSNATDTPPPPPPSNATNTPPPPPPSNATDTPPPPPPSNATDSPPPPPSNTTGTPPPPSPSNTTNSPPPPPNSTVNLPPAPPPNLGSSPPPSPTPNEALKEKGGGGSKGLSGGQKAGIAFGVIIGVGLLGFVGLICIKRRSNARRSSYGYAARDSIL* Homology
BLAST of Chy10G185220 vs. ExPASy Swiss-Prot
Match: Q9FLQ7 (Formin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=FH20 PE=2 SV=3) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09 Identity = 84/171 (49.12%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of Chy10G185220 vs. ExPASy Swiss-Prot
Match: Q84ZL0 (Formin-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=FH5 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06 Identity = 88/197 (44.67%), Postives = 101/197 (51.27%), Query Frame = 0
BLAST of Chy10G185220 vs. ExPASy TrEMBL
Match: A0A5D3CD81 (Neural Wiskott-Aldrich syndrome protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002750 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.5e-88 Identity = 219/265 (82.64%), Postives = 227/265 (85.66%), Query Frame = 0
BLAST of Chy10G185220 vs. ExPASy TrEMBL
Match: A0A6J1CDD2 (formin-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111010181 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.5e-64 Identity = 169/223 (75.78%), Postives = 184/223 (82.51%), Query Frame = 0
BLAST of Chy10G185220 vs. ExPASy TrEMBL
Match: A0A1R2B404 (Uncharacterized protein OS=Stentor coeruleus OX=5963 GN=SteCoe_30247 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.8e-20 Identity = 92/161 (57.14%), Postives = 110/161 (68.32%), Query Frame = 0
BLAST of Chy10G185220 vs. ExPASy TrEMBL
Match: A0A3Q3MJC6 (SEA domain-containing protein OS=Mastacembelus armatus OX=205130 PE=4 SV=2) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18 Identity = 95/161 (59.01%), Postives = 103/161 (63.98%), Query Frame = 0
BLAST of Chy10G185220 vs. ExPASy TrEMBL
Match: A0A7N9AXL6 (Uncharacterized protein OS=Mastacembelus armatus OX=205130 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18 Identity = 95/161 (59.01%), Postives = 103/161 (63.98%), Query Frame = 0
BLAST of Chy10G185220 vs. NCBI nr
Match: KAA0034727.1 (neural Wiskott-Aldrich syndrome protein-like [Cucumis melo var. makuwa] >TYK09280.1 neural Wiskott-Aldrich syndrome protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 334 bits (857), Expect = 8.76e-113 Identity = 219/265 (82.64%), Postives = 227/265 (85.66%), Query Frame = 0
BLAST of Chy10G185220 vs. NCBI nr
Match: XP_038891654.1 (proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]) HSP 1 Score: 301 bits (770), Expect = 7.18e-100 Identity = 192/251 (76.49%), Postives = 210/251 (83.67%), Query Frame = 0
BLAST of Chy10G185220 vs. NCBI nr
Match: XP_022139212.1 (formin-like protein 20 [Momordica charantia]) HSP 1 Score: 254 bits (648), Expect = 4.56e-80 Identity = 169/223 (75.78%), Postives = 184/223 (82.51%), Query Frame = 0
BLAST of Chy10G185220 vs. NCBI nr
Match: OMJ71518.1 (hypothetical protein SteCoe_30247 [Stentor coeruleus]) HSP 1 Score: 108 bits (269), Expect = 1.46e-22 Identity = 88/156 (56.41%), Postives = 105/156 (67.31%), Query Frame = 0
BLAST of Chy10G185220 vs. NCBI nr
Match: XP_042825738.1 (LOW QUALITY PROTEIN: basic proline-rich protein-like, partial [Panthera tigris]) HSP 1 Score: 104 bits (259), Expect = 2.04e-21 Identity = 86/167 (51.50%), Postives = 120/167 (71.86%), Query Frame = 0
BLAST of Chy10G185220 vs. TAIR 10
Match: AT5G07740.1 (actin binding ) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10 Identity = 84/171 (49.12%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of Chy10G185220 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04 Identity = 85/177 (48.02%), Postives = 97/177 (54.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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