Chy10G184820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G184820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 4-like
Location	chrH10: 17389844 .. 17391218 (-)
RNA-Seq Expression	Chy10G184820
Synteny	Chy10G184820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTCGTCGGATTCGCGACTGGGATTCGTCAGATCTGGGGTTTGCGGCTGGAGTTCACGACAGGGGTTCGCTGCAGGTGAGCTTCTTCACGGCTGGGGTTCGCGCACAAGGGTTTCACGGCTGGAGTTCAGCTTCTTCACAGCTGGGGTTCACGCACAAGGGTTTCGCGGCTGGAGTTCAGCTTCTTCACGGCTGGGGTTCGCGCGCAAGGGGTTTGTGGCTGGAGTTCCTACAGGGCTTCACTGTTGGGGTTCGCGCGCAAGGAGTTCGCGGTTGGTGAGCGTCTTCACGGCTGTGGTTCGTGGCCAGGATTCGTCTTCACAGCTGGGGTTCGCCGTAGGGTTGCGTCTTCACGGCTAGGTTGCAACAGTGAAGACACGACGCGTTAAACTGAGACGAAGATGAAGATTCAGAGATGAATAGTAGACTGAGGTTCACGGCTGTGATGGGAGACGAGAACGGAGACAGATTGTAAGATCTGTTGTTCAGATCTGTGGACGAATCGTGAATGATTTGTGATTCTGAGCAAAGATCTATTGGCAGGGATGAAGGATTTCATCGTCAATGATCTTCACGACAGAGATCTCGGCGGCGTCGGCGACGGCGGTGAGTACAGTAGATCTAGGTTTTCTGCTCTGATACCATGTGGGGGGATATTCTAATATTTTATTGGTGAATATTCTATATCTTACATGAGTATCAATTTGTACATAAATAGAGAAATTACACAAAGTAAATAAGGAAGGTAATATAATTAGCCTAAACTATAGAATTTACATTAATATAGATAATAATAAAATCACTTCTAATTCAAACGTTAAAAACCAATTAGGTATTTTAAAGGGATACGTCGGGCTAAGCGGCGCCATAATCACACAGCTCTTCCACGCATTCTACGGCGGCGACACCAAATCCTTCATTCTCCTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTCTTACGAACAATTCGTATCATGAAAGTCATCCGACAGCCAAATGAGCTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTGTTCTCGCCGGATTCCTCATGCTAATGATCATTGCACAAAGCAAAACAGAGTTCACTCAGAACCAATATGGTGGCAGCACTGCCGCCATCGTCGTCCTTCTCCTCCTCCCACTTGCCATCATCATTATCGAAGAATACAATCTCTGGAAACTTAAAACCAAATCTGATCCAAACCCATCTGTTCAAATCATAACAGAGCAACTCCCAAAAACAGAGCATCCAAAACAAGAACAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCACAACGAGGCGAGGATTTCACAATTCTCCAAGCTGTCTTCAGTGTCGACATGCTGA

mRNA sequence

ATGAGGTTCGTCGGATTCGCGACTGGGATTCGTCAGATCTGGGGTTTGCGGCTGGAGTTCACGACAGGGGTTCGCTGCAGCTGGGGTTCACGCACAAGGGTTTCGCGGCTGGAGTTCAGCTTCTTCACGGCTGGGGTTCGCGCGCAAGGGGTTTGTGGCTGGAGTTCCTACAGGGCTTCACTGTTGGGGTTCGCGCGCAAGGAGTTCGCGGTTGGTGAGCGTCTTCACGGCTGTGGTTCGTGGCCAGGATTCGTCTTCACAGCTGGGGTTCGCCGTAGGGTTGCGTCTTCACGGCTAGGTATTTTAAAGGGATACGTCGGGCTAAGCGGCGCCATAATCACACAGCTCTTCCACGCATTCTACGGCGGCGACACCAAATCCTTCATTCTCCTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTCTTACGAACAATTCGTATCATGAAAGTCATCCGACAGCCAAATGAGCTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTGTTCTCGCCGGATTCCTCATGCTAATGATCATTGCACAAAGCAAAACAGAGTTCACTCAGAACCAATATGGTGGCAGCACTGCCGCCATCGTCGTCCTTCTCCTCCTCCCACTTGCCATCATCATTATCGAAGAATACAATCTCTGGAAACTTAAAACCAAATCTGATCCAAACCCATCTGTTCAAATCATAACAGAGCAACTCCCAAAAACAGAGCATCCAAAACAAGAACAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCACAACGAGGCGAGGATTTCACAATTCTCCAAGCTGTCTTCAGTGTCGACATGCTGA

Coding sequence (CDS)

ATGAGGTTCGTCGGATTCGCGACTGGGATTCGTCAGATCTGGGGTTTGCGGCTGGAGTTCACGACAGGGGTTCGCTGCAGCTGGGGTTCACGCACAAGGGTTTCGCGGCTGGAGTTCAGCTTCTTCACGGCTGGGGTTCGCGCGCAAGGGGTTTGTGGCTGGAGTTCCTACAGGGCTTCACTGTTGGGGTTCGCGCGCAAGGAGTTCGCGGTTGGTGAGCGTCTTCACGGCTGTGGTTCGTGGCCAGGATTCGTCTTCACAGCTGGGGTTCGCCGTAGGGTTGCGTCTTCACGGCTAGGTATTTTAAAGGGATACGTCGGGCTAAGCGGCGCCATAATCACACAGCTCTTCCACGCATTCTACGGCGGCGACACCAAATCCTTCATTCTCCTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTCTTACGAACAATTCGTATCATGAAAGTCATCCGACAGCCAAATGAGCTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTGTTCTCGCCGGATTCCTCATGCTAATGATCATTGCACAAAGCAAAACAGAGTTCACTCAGAACCAATATGGTGGCAGCACTGCCGCCATCGTCGTCCTTCTCCTCCTCCCACTTGCCATCATCATTATCGAAGAATACAATCTCTGGAAACTTAAAACCAAATCTGATCCAAACCCATCTGTTCAAATCATAACAGAGCAACTCCCAAAAACAGAGCATCCAAAACAAGAACAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCACAACGAGGCGAGGATTTCACAATTCTCCAAGCTGTCTTCAGTGTCGACATGCTGA

Protein sequence

MRFVGFATGIRQIWGLRLEFTTGVRCSWGSRTRVSRLEFSFFTAGVRAQGVCGWSSYRASLLGFARKEFAVGERLHGCGSWPGFVFTAGVRRRVASSRLGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNLWKLKTKSDPNPSVQIITEQLPKTEHPKQEQKNHLVGQQFSTHHNEARISQFSKLSSVSTC*

Homology

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BLAST of Chy10G184820 vs. ExPASy TrEMBL
Match: A0A5D3CFW3 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002400 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 128/154 (83.12%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQLFHAFYG DTKS ILLIGWLPAAISFA LRTIRIMKVIRQPNE
Sbjct: 156 LGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFASLRTIRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SK EF QN+YGGS A +++LL LPL+++IIEEYNL
Sbjct: 216 LKVFYNFLYISLALAGFLMLMIIVESKKEFNQNEYGGSAAVVLLLLFLPLSVVIIEEYNL 275

Query: 219 WKLKTK--SDPNPSVQIITEQLPKTEHPKQ-EQK 250
           WKLKT     PNPSVQI+TE+LPKTEHPKQ EQK
Sbjct: 276 WKLKTALVKSPNPSVQIVTEKLPKTEHPKQLEQK 309

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BLAST of Chy10G184820 vs. ExPASy TrEMBL
Match: A0A1S3BG09 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo OX=3656 GN=LOC103489435 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 128/154 (83.12%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQLFHAFYG DTKS ILLIGWLPAAISFA LRTIRIMKVIRQPNE
Sbjct: 156 LGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFASLRTIRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SK EF QN+YGGS A +++LL LPL+++IIEEYNL
Sbjct: 216 LKVFYNFLYISLALAGFLMLMIIVESKKEFNQNEYGGSAAVVLLLLFLPLSVVIIEEYNL 275

Query: 219 WKLKTK--SDPNPSVQIITEQLPKTEHPKQ-EQK 250
           WKLKT     PNPSVQI+TE+LPKTEHPKQ EQK
Sbjct: 276 WKLKTALVKSPNPSVQIVTEKLPKTEHPKQLEQK 309

[Close]

BLAST of Chy10G184820 vs. ExPASy TrEMBL
Match: A0A5D3CCM6 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002390 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 8.4e-61
Identity = 123/153 (80.39%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGY+GLSGAIITQLFHAFYG D KS IL IGWLP A+SFA L  IRIMKVIRQPNE
Sbjct: 35  LGILKGYIGLSGAIITQLFHAFYGADAKSLILFIGWLPPAVSFASLPIIRIMKVIRQPNE 94

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SKTEFTQNQYGGS A +++LLLLP+ +++IEEYNL
Sbjct: 95  LKVFYNFLYISLALAGFLMLMIIVESKTEFTQNQYGGSVAVLLLLLLLPIVVVVIEEYNL 154

Query: 219 WKLKTK--SDPNPSVQIITEQLPKTEHPKQEQK 250
           WKLKT     P PSVQI+TEQLPKTEHPKQEQK
Sbjct: 155 WKLKTSLVKSPTPSVQIVTEQLPKTEHPKQEQK 187

[Close]

BLAST of Chy10G184820 vs. ExPASy TrEMBL
Match: A0A6J1K186 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489721 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 6.0e-59
Identity = 123/155 (79.35%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQLFHAFYGGDTKS ILLIGWLPAAISFAFLRTIRIMKVIRQPNE
Sbjct: 156 LGILKGYVGLSGAIITQLFHAFYGGDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SKTEF+Q+ YGGS A +++LL LPLA++IIEEYNL
Sbjct: 216 LKVFYNFLYISLALAGFLMLMIIIESKTEFSQSGYGGSAAVVLLLLFLPLAVVIIEEYNL 275

Query: 219 WKLKTKS-------DPNPSVQIITEQLPKTEHPKQ 247
           W LKT +        PN  VQI+TE++PKTEH KQ
Sbjct: 276 WNLKTAAATAAAIRSPNHPVQIVTEKVPKTEHQKQ 310

[Close]

BLAST of Chy10G184820 vs. ExPASy TrEMBL
Match: A0A6J1GZI8 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458291 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 7.9e-59
Identity = 124/157 (78.98%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQLFHAFYGGDTKS ILLIGWLPAAISFAFLRTIRIMKVIRQPNE
Sbjct: 156 LGILKGYVGLSGAIITQLFHAFYGGDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SKTEF+Q+ YGGS A +++LL LPLA++IIEEYNL
Sbjct: 216 LKVFYNFLYISLALAGFLMLMIIVESKTEFSQSGYGGSAAVVLLLLFLPLAVVIIEEYNL 275

Query: 219 WKLKTKS------DPNPSVQIITEQLPKTEHPKQEQK 250
           W LKT +       PN  VQI+TE+LPKTEH K   K
Sbjct: 276 WNLKTAAATAAIRSPNHPVQIVTEKLPKTEHQKHIPK 312

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BLAST of Chy10G184820 vs. NCBI nr
Match: XP_031741159.1 (uncharacterized protein LOC101205029 [Cucumis sativus] >KAE8648846.1 hypothetical protein Csa_008243 [Cucumis sativus])

HSP 1 Score: 261 bits (668), Expect = 1.24e-79
Identity = 136/150 (90.67%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LG+LKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAIS AFLRT+RIMKVIRQPNE
Sbjct: 156 LGLLKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISLAFLRTVRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL+LAGFLMLMII QSKTEFTQNQYGGS AAIVVLLLLPLA++  EEYNL
Sbjct: 216 LKVFYNFLYISLLLAGFLMLMIIVQSKTEFTQNQYGGSAAAIVVLLLLPLAVVTTEEYNL 275

Query: 219 WKLKTKSDPNPSVQIITEQLPKTEHPKQEQ 248
           WKLKTKS PNPSVQIITEQLPKTEHP+Q++
Sbjct: 276 WKLKTKS-PNPSVQIITEQLPKTEHPEQKE 304

[Close]

BLAST of Chy10G184820 vs. NCBI nr
Match: XP_031741165.1 (uncharacterized protein LOC101205265 [Cucumis sativus] >KAE8648845.1 hypothetical protein Csa_009229 [Cucumis sativus])

HSP 1 Score: 247 bits (630), Expect = 5.40e-74
Identity = 131/150 (87.33%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LG+LKGY+GLSGAIITQLFHAFYGGDTKS IL IGWLPAAISFAFLRT+RIMKVIRQPNE
Sbjct: 156 LGLLKGYIGLSGAIITQLFHAFYGGDTKSLILFIGWLPAAISFAFLRTVRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL+LAGFLMLMII QSKTEFTQNQYGGS AAIVVLLLLPLA++ IEE NL
Sbjct: 216 LKVFYNFLYISLLLAGFLMLMIIVQSKTEFTQNQYGGSAAAIVVLLLLPLAVVTIEECNL 275

Query: 219 WKLKTKSDPNPSVQIITEQLPKTEHPKQEQ 248
            KLKTKS PN SVQIITE+LPKTEH KQ++
Sbjct: 276 QKLKTKS-PNSSVQIITEKLPKTEHSKQKE 304

[Close]

BLAST of Chy10G184820 vs. NCBI nr
Match: XP_004142499.3 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus] >KAE8648849.1 hypothetical protein Csa_008497 [Cucumis sativus])

HSP 1 Score: 246 bits (628), Expect = 1.04e-73
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQLFHAFYG DTKS ILLIGWLPAAISFA LRTIRIMKVIRQPNE
Sbjct: 156 LGILKGYVGLSGAIITQLFHAFYGDDTKSLILLIGWLPAAISFASLRTIRIMKVIRQPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SK +F QN+YGGS A +++LL+LPLA++IIEEYNL
Sbjct: 216 LKVFYNFLYISLALAGFLMLMIIVESKKQFNQNEYGGSAAVVLLLLILPLAVVIIEEYNL 275

Query: 219 WKLKTK--SDPNPSVQIITEQLPKTEHPKQEQK 249
           WKLKT     PNPSVQI+TE+LPKTEHPKQE+K
Sbjct: 276 WKLKTAVIKSPNPSVQIVTEKLPKTEHPKQERK 308

[Close]

BLAST of Chy10G184820 vs. NCBI nr
Match: KAA0034694.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa] >TYK09245.1 protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (614), Expect = 7.80e-73
Identity = 123/153 (80.39%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGY+GLSGAIITQLFHAFYG D KS IL IGWLP A+SFA L  IRIMKVIRQPNE
Sbjct: 35  LGILKGYIGLSGAIITQLFHAFYGADAKSLILFIGWLPPAVSFASLPIIRIMKVIRQPNE 94

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SKTEFTQNQYGGS A +++LLLLP+ +++IEEYNL
Sbjct: 95  LKVFYNFLYISLALAGFLMLMIIVESKTEFTQNQYGGSVAVLLLLLLLPIVVVVIEEYNL 154

Query: 219 WKLKTK--SDPNPSVQIITEQLPKTEHPKQEQK 249
           WKLKT     P PSVQI+TEQLPKTEHPKQEQK
Sbjct: 155 WKLKTSLVKSPTPSVQIVTEQLPKTEHPKQEQK 187

[Close]

BLAST of Chy10G184820 vs. NCBI nr
Match: XP_038893353.1 (LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 4-like [Benincasa hispida])

HSP 1 Score: 244 bits (622), Expect = 9.43e-73
Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQLFHAFYG DTKS ILLIGWLPAAISFAFLRTIRI+KVIR PNE
Sbjct: 156 LGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIIKVIRHPNE 215

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LAGFLMLMII +SKTEFTQN+YGGS A ++VLL LPLA++IIEEYNL
Sbjct: 216 LKVFYNFLYISLGLAGFLMLMIIIESKTEFTQNEYGGSAAVVLVLLFLPLAVVIIEEYNL 275

Query: 219 WKLKTK--SDPNPSVQIITEQLPKTEHPKQEQK 249
           WKLKT      NP VQI+TEQLPKTEHPKQ  K
Sbjct: 276 WKLKTAFIKSSNPCVQIVTEQLPKTEHPKQTPK 308

[Close]

BLAST of Chy10G184820 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.9e-45
Identity = 96/146 (65.75%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LGILKGYVGLSGAIITQL+ AFYG DTK  IL+IGWLPA +SFAFLRTIRIMKV RQ NE
Sbjct: 153 LGILKGYVGLSGAIITQLYRAFYGEDTKELILMIGWLPAIVSFAFLRTIRIMKVKRQTNE 212

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           LKVFYNFLYISL LA FLM++II    + FTQ+++GGS A ++VLLLLP+ ++I+EE  L
Sbjct: 213 LKVFYNFLYISLGLATFLMVVIIINKLSGFTQSEFGGSAAVVIVLLLLPIIVVILEEKKL 272

Query: 219 WKLK--TKSDPNPSVQIITEQLPKTE 243
           WK K    +DP P + ++TE+ PK +
Sbjct: 273 WKEKQVALNDPAP-INVVTEK-PKLD 296

[Close]

BLAST of Chy10G184820 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 9.0e-31
Identity = 74/149 (49.66%), Postives = 92/149 (61.74%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           LG+LKGYVGLSGAI TQL+ A YG D+KS ILLI WLPAA+S  F+  IR  KV+RQ NE
Sbjct: 149 LGLLKGYVGLSGAIFTQLYFAIYGHDSKSLILLIAWLPAAVSLVFVYLIREKKVVRQRNE 208

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIIIIEEYNL 218
           L VFY FLYIS+ LA FLM M IA+ +  F++  Y  S      LL +PL + + +E  +
Sbjct: 209 LSVFYQFLYISIFLALFLMAMNIAEKQVHFSKAAYAASATICCALLFVPLTVSVKQELEV 268

Query: 219 WKLKTKSDPNPSVQIITEQLPKTEHPKQE 248
           W +       PS         K E PK+E
Sbjct: 269 WNMMKLPIEEPSE-------VKVEKPKKE 290

[Close]

BLAST of Chy10G184820 vs. TAIR 10
Match: AT1G18940.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 39/114 (34.21%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           +GI+KG+VGLSGA++ QL+     GD K+FILL+  +P+ +S   +  +R+ K     +E
Sbjct: 155 VGIMKGFVGLSGAMLIQLYEVVCPGDPKTFILLLAIVPSLLSVLVMPLVRVYKT-STVDE 214

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIII 213
            K       +SL++A +LM+ II +S           + A ++VLL  PL + +
Sbjct: 215 KKHLDGLSTLSLIIAAYLMITIILKSTLSLPSWANAVTLAVLLVLLSSPLLVAV 267

[Close]

BLAST of Chy10G184820 vs. TAIR 10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           +GI+KG++GLSGAI+ QL+     GD  SFILL+   P  +S   +  +RI +     ++
Sbjct: 155 VGIMKGFLGLSGAILIQLYETLCAGDPASFILLLAVTPTVLSLLVMPLVRIYET-SVADD 214

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIII 213
            K       +SL++A +LM++II   K  F  + +      + +L++L L ++I
Sbjct: 215 KKHLNGLSAVSLIIAAYLMIIIIL--KNTFGLSSWANIVTLVCLLVMLALPLLI 265

[Close]

BLAST of Chy10G184820 vs. TAIR 10
Match: AT2G34350.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 34/114 (29.82%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 99  LGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTIRIMKVIRQPNE 158
           +GI+KGY+GLSGAI+ Q++H F GGD +++ILL+  +P+ +    +  +R    +    +
Sbjct: 151 VGIMKGYLGLSGAILVQMYHIFCGGDPRNYILLLAVVPSLLILTLMPFVRTYDTV-IAGD 210

Query: 159 LKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSTAAIVVLLLLPLAIII 213
            K       ISL++  +LM++I+ ++    +      S   +++LL  PL + +
Sbjct: 211 KKHLNGLSAISLIIVTYLMVVILVENIIGMSMPMKICSFTFLLLLLASPLLVAV 263

The following BLAST results are available for this feature:

BLAST of Chy10G184820 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G184820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFW3	2.2e-61	83.12	Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BG09	2.2e-61	83.12	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo OX=3656 GN=LOC103489435 ...	[more]
A0A5D3CCM6	8.4e-61	80.39	Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1K186	6.0e-59	79.35	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489...	[more]
A0A6J1GZI8	7.9e-59	78.98	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Chy10G184820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741159.1	1.24e-79	90.67	uncharacterized protein LOC101205029 [Cucumis sativus] >KAE8648846.1 hypothetica...	[more]
XP_031741165.1	5.40e-74	87.33	uncharacterized protein LOC101205265 [Cucumis sativus] >KAE8648845.1 hypothetica...	[more]
XP_004142499.3	1.04e-73	83.01	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus] >KAE8648849.1 hypothet...	[more]
KAA0034694.1	7.80e-73	80.39	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa] >TYK09245.1 p...	[more]
XP_038893353.1	9.43e-73	83.66	LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 4-like [Benincasa hispida]	[more]

BLAST of Chy10G184820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39210.1	2.9e-45	65.75	Major facilitator superfamily protein	[more]
AT2G28120.1	9.0e-31	49.66	Major facilitator superfamily protein	[more]
AT1G18940.1	1.3e-10	34.21	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT1G74780.1	1.1e-09	32.46	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT2G34350.1	2.5e-09	29.82	Nodulin-like / Major Facilitator Superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010658	Nodulin-like	PFAM	PF06813	Nodulin-like	coord: 98..211 e-value: 2.6E-29 score: 102.4
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 97..241
None	No IPR available	PANTHER	PTHR21576:SF117	MFS TRANSPORTER	coord: 97..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G184820.1	Chy10G184820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099587	inorganic ion import across plasma membrane
biological_process	GO:0002239	response to oomycetes
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0022857	transmembrane transporter activity