Chy10G178140 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCGCACCATTGACGCCCATCTGAGGTCCGTACGCCTCCTTCCCAGTCTCTCTTCTTCTTCATCTTCTTCTCTATTCTCCTCCGGCCGTTCTTTTCTCACTCGCTCAGTTTCAACAACCCTTTTCTCTCCTCCACCCAAGCCTCACTCAATTACTCTCTCTAAAACCCTAGCGTTTCCTCCTCTCATTAACTATTTATCGAGTGTTTCCTGTTTTAGCCTTGGAATTCAACGCCTCCCAGGATCGAATTATGGTGTGTTGGTGTTGGCGAGGTGCATTACCTCTTCAGTCTACTCATTGGAGTGGAATGAACCAGCGTCGTGTTCCGAAGTTGGGGATGGTGGTTTTCGAAATGTTCGGGAAGGAATTAGCGATGGTGAAGGGGATGAAGTTGAGGAGGATTCTAGACCGTCTATTCCTGTCAGAGCTTATTTCTTCTCCACTAGGTTGCAATTTCTTTCACTCTTTGCTATTTTATTGCAGATAGCTTAATTCAATCATATGGTGGTGTTCTTTTGGTCTACTTTGTTCCCTTTCACCTTTTGCAGTTTTAATGGTTCTGGGATTTTTTTAAATGTGTGGCTTGAGAAAAGTTTGAACGACTAAAAATCTTCGTGAAGTTTTAAACCAGCAATTGTGAGCTATAAACGTGTGTGTTTCTGATTTATTCTCTTTTTCAATTCTTTTCTTTGATTCAGTGTGGATTTGAGAAGCTTGGTAGATCAGAATAAACGTAACTTTATCCCGCCATCTTCTCGTATGACGAATTACGTAGTACTTAAGTTCGGGGATCTTTGTAATGTGAACGTAAGCTTGCTTTGTAGTCGAGTATTGTTCATGATTACTTGGATGAGTACACTTTGATGGCACTTTTTTTCTCTAGACTCATGGTGCCAGCATAAGCGGAAGTGATTGCTGTTTCATGGTAGTTTTTCAGTATGGCTCTATTGTGCTGTTCAACGTTCGTGAACATGAGGTTGATGGGTATTTGAAAATTGTAGAGAAACATGCTTCCGGATTGCTGCCTGAAATGAGAAAGGATGGTAAGGAAATCGGAATATATTTTTATACAGATTTGTTTCTACTTGAGTCATAGTTGGTGGTGGTTGTAGTGATAACTGATATAAAGCACTAAGGGTGCATTAATCAGAAAGTGGAATAAGAAAGGAGGAGATAAGCCATCTTCCCTTTCTAGAACCAATTATTAGCAATGGCCCTGTCTAAGTTGATTGAATGGTAGAGTAGTTTCATAAAAATATCAATGAGAGGGACTTGTAAATCTATTTTGAAAAGTTATAGATTCATTTCTCTCCCAATTGATCAAAAGTAGCCTCGCCAACATTGCTTCATGCATTTCTTGATGCTTTTTTTTCTATTTTGTTTACTTCTTAACTGCTTTCAGTTCCATTAATAAGTATGTTCCCCTGCTATTTGATGTCGTGTGTTACTTAAAATTTCAGTAGTGGAAGTGTGTGGTTGTCTTAATTTGGAAGTTGTATGAGTTTGTAGAGTATGAGGTTAGAGAGAAGCCTGCCTTAAATACATGGATGGAAGGAGGCTTGGACTACATAATGCTGCAGTACTTGAATATTGATGGCATACGTACCATAGGTAGTGTTCTTGGTCAGAGTATTGCTCTGGATTACTATGGGCGACAGGTAGTTACCTTATCTGACTTGACATTTTAATGCTAGTTAATGTTGATGATATTTGACATGATCCAACCACACTATTAACGTTTGGTTCAAAGGTTGATGGGATGGTTGCAGAATTCACTGACATCAACCGTGAAATGGAAGCAACTGGGAAGTTCAAAATGAAGAGAAAAAAACTTTTCCAGTTGGTGGGAAAGGCGAATTCAAATCTTGCTGATGTCATTTTGAAGCTTGGACTTTTTGAGAGGCAAGTTAGTTATTTCCGTAAATAATTAGTTTGTGTATAGAATTGTATTTACTTATCTCCAGAAGAGACGAATGTACTTCATATGATCGAACAAGAAGAAAGTAATTTTACGTTGTTTACCTTCACCTACCAATATAAGGTTCTGGGTCATCTGTGATTTAGCACTTTCCATTATCAACATTCTACCATGGGAAGTGTCCTTATTATTCATATTTCCTAGTGAATCATTCTCTCTCTCTCTCTCAATTAACAACTTATGTATGATCTGTCCACTTATTATTGAGTATACTGTTCCCTTTTACTTGATGTTTTTTTTGGACCTTTTTTCAGATCTGACATTGCATGGAAGGATGCAAAATATGCTCAAATATGGGAATATCTCAGAGACGAGTTCGAGTTAACACAGAGATTTGCAAGTCTGGATTTCAAATTGAAGTTTGTGGAGGTAGTACCATCTAGTTAAGATGAGAATATGTTCCTGTTGATTCTTTATTCGTTGATATGCACATATAAGTCATCTTGAACGCCACCCAATGACTCTTTGTTTCTCTCTTTTTTTGTCAGCATAATATTCGATTCCTACAAGAGATTCTTCAAAACAGGAAATCAGATTTTTTGGAATGGCTGATCATTGCATTAATCGGTGCAGAAATTTTACTCTCACTTTATGACATTATTCATAGATCAGCAGCTAATCTTTAGCACTGTTTGGTTTCTGATCCTTGGAGTTGGAACTGCACAATTTTGGCTCCCTGTATCGGGGTACGTATTTCTCCACTGCAATTTATACAATGTACATAGCTATGTAAATTTGGAACATTCTGCTATACAACTCCGATAATTTCGGATAGCTCTCTAAGGGTGCTAAAAGAGTATTTTAAACAGTTCTATAATTCTTTGTTGAAGTAATGAATCTCAGCCTTGTCTTCTTATTTCCTTACTGTTCATCATATTCATTTGACTGATAAGAAGAGATTTAAAGCTGCAAATTGTTTTTGAATGAAAGCATCTAGGTCTTCCTTTTTTTTTTTTAATGGGAATGAATCGTGTTTGCAAGAAAAAGGCTCACTAGTCCATTTGCAGTCCAAATACACCCTTTTGTGTATATACAATTTTTGTCTGTATGACTCAATAATCCTAATTGTTTAAGCAAATATTGTCTAATAGTTAAATTTCAGGGCATGTTTGGTGCTAGGCATGTAGTGGGCTAGTCCACTTCTTGTTTGGAGCAAAGTTTAGTTTTAGTAAGGATTAAGATTAGGATTTAAAATAACCCACCGGTCATTACTATTCTTCAACTCCAAGAGGATTTGTTTCAAGGATTGTGAAGTTTGTCGACCAACTTTTGGACAACATATCTGGTGATCGCCGGCCAAAGAAGACCGTCCACCACCTTCGGTGACTCCAGCGGTGAACTTTCGACAACCAACCTTAGCGACCGTTGCTAGCCAACCTTCCATCGTCATTGATCGACCTTGAAATTTTTTAATAAAACTATTTTTGAAAACTTTTAATGAAGACATTTTTGAAAACTTTTAATGAAGACATTTTTTTGAAATTTTTTAATAAAAACATTTTTAGGGTTTAGGCTAATCTCCTTTGATTGTTGGCCAATCTCCAGCCACCATCTTCGGTGACTTTATTTGAGAACTTTCGATAACAAGCAACCATCCCTACTATCCTTTAAAACATTTTTGGTATATATAACAAATAAAAGAGATTTGTTTATCGAATATCTTTTTAAAAAGTTTAAAACACACTTTGTTATTGTGTTATTATTTTAAGAAGTTTTTATTAAAAGTGTTTAAATAATTTGTATAAACTTTTTTTTAAAGTCATTCCAACTTTTAGTTTAATTATAATAATATACTTTAAAATGTACTTCTTATGTTTTTTTTTCTGGACCTTCTTGTTAAACTTGTTAATAGTCATATATGGAGATTGCATTTAAATGTCATATGAACTATCTAATTAACAAGATATAATTTAATCACACATTAATTTCTATAAAATATGTTATAATATTAAATTGTAGAAGATGTTTATCCCAACTATTAATAAATTAATTTGTATAAACTAATGAAATGTGCAATTCCAATTATGTTTTTTAAAAAAATGGTATTTTATGTACTTAATATACTTAGGTTAGAAAATAATAGTGAAAAAAAAACATGATATAACATAAACTATAATAACTCATACTATAACCGTGAGCAACCGTGAAAGCTTAGGTGAAACAAAAACTAGATGCAAAACTCGATGATAAAACTATAACATCAATAAGCTTATAGATCAAATAAAAATTAAATTTAAAACTAAGCTAAATATGTGACACCTTGAAAACTAGGGATGAAATTGAAATCGGGTAATACCAAACTATTTTTTTTTTTCAAAAAAACAAACAAGTATTAGTTACTTAGTTTAATTGGCTAAGAAATTTCACTCTTAGTATTATATTAACTCTGAGATTTGTATCCAAAAGTGATTATATACTTCCAAAGGTAAATTTGAATAAATAATGTGGTTTTAAAAAATAATTATTGAAATATCGTAGATAATAAAATCTAATTAATTAAATAAAAACTAACTAACAATTAATTAAACAAAATCTAACTAACAATTAATTAACGTAATAACGATATTAAAAAAAAAAAAAGAAACAAACTTCGAGATTTTAAGAGAACTTCATGGAAGGAGATAAAACATGAAGAATAAGAAGATTTAGGGTAGGGAAAATTTTTTTTAAAAAAAATTAGCGTGGGAAAGAAGAAGATTGAAAGTGAAAGATTTAAAAAAAAACACACATCAATGAAGTGAAAGACCCTCCCATGAAAAGCTGAGATTCTCTAAACAACAGAGACTTTATTTGTATGGTCTAAGACTAGACATTTTTTTTTAATAGAAACTAGACCTATTAATATAATTTTCGAAACTACCATAAATCTCTAGATTTTTTATCCCTTCCAATATGGTCTCTAATGAGATTCAAAATTTGTACAAATTAATACTTCTAATAAACATAAATATAAATTTTATATGTAATAGAATAAAAACTCAAAATTTTGTAGGAAAGTTAGGAAGTTAAGATATTAAATTTATAACCTAACTTTCTTTTCCAAGCGAAAGACAAGTGGCCAATTCGCGGGACACCAAAAACAAAAGAAATAAAAGAGTCGACGATTCAAAGCTTCCTCGTCGCTAA ATGTGGCGCACCATTGACGCCCATCTGAGCCTTGGAATTCAACGCCTCCCAGGATCGAATTATGGTGTGTTGGTGTTGGCGAGGTGCATTACCTCTTCAGTCTACTCATTGGAGTGGAATGAACCAGCGTCGTGTTCCGAAGTTGGGGATGGTGGTTTTCGAAATGTTCGGGAAGGAATTAGCGATGGTGAAGGGGATGAAGTTGAGGAGGATTCTAGACCGTCTATTCCTGTCAGAGCTTATTTCTTCTCCACTAGTGTGGATTTGAGAAGCTTGGTAGATCAGAATAAACGTAACTTTATCCCGCCATCTTCTCGTATGACGAATTACGTAGTACTTAAGTTCGGGGATCTTTGTAATGTGAACACTCATGGTGCCAGCATAAGCGGAAGTGATTGCTGTTTCATGGTAGTTTTTCAGTATGGCTCTATTGTGCTGTTCAACGTTCGTGAACATGAGGTTGATGGGTATTTGAAAATTGTAGAGAAACATGCTTCCGGATTGCTGCCTGAAATGAGAAAGGATGAGTATGAGGTTAGAGAGAAGCCTGCCTTAAATACATGGATGGAAGGAGGCTTGGACTACATAATGCTGCAGTACTTGAATATTGATGGCATACGTACCATAGGTAGTGTTCTTGGTCAGAGTATTGCTCTGGATTACTATGGGCGACAGGTTGATGGGATGGTTGCAGAATTCACTGACATCAACCGTGAAATGGAAGCAACTGGGAAGTTCAAAATGAAGAGAAAAAAACTTTTCCAGTTGGTGGGAAAGGCGAATTCAAATCTTGCTGATGTCATTTTGAAGCTTGGACTTTTTGAGAGATCTGACATTGCATGGAAGGATGCAAAATATGCTCAAATATGGGAATATCTCAGAGACGAGTTCGAGTTAACACAGAGATTTGCAAGTCTGGATTTCAAATTGAAGTTTGTGGAGCTAATCTTTAGCACTGTTTGGTTTCTGATCCTTGGAGTTGGAACTGCACAATTTTGGCTCCCTGTATCGGGCGAAAGACAAGTGGCCAATTCGCGGGACACCAAAAACAAAAGAAATAAAAGAGTCGACGATTCAAAGCTTCCTCGTCGCTAA ATGTGGCGCACCATTGACGCCCATCTGAGCCTTGGAATTCAACGCCTCCCAGGATCGAATTATGGTGTGTTGGTGTTGGCGAGGTGCATTACCTCTTCAGTCTACTCATTGGAGTGGAATGAACCAGCGTCGTGTTCCGAAGTTGGGGATGGTGGTTTTCGAAATGTTCGGGAAGGAATTAGCGATGGTGAAGGGGATGAAGTTGAGGAGGATTCTAGACCGTCTATTCCTGTCAGAGCTTATTTCTTCTCCACTAGTGTGGATTTGAGAAGCTTGGTAGATCAGAATAAACGTAACTTTATCCCGCCATCTTCTCGTATGACGAATTACGTAGTACTTAAGTTCGGGGATCTTTGTAATGTGAACACTCATGGTGCCAGCATAAGCGGAAGTGATTGCTGTTTCATGGTAGTTTTTCAGTATGGCTCTATTGTGCTGTTCAACGTTCGTGAACATGAGGTTGATGGGTATTTGAAAATTGTAGAGAAACATGCTTCCGGATTGCTGCCTGAAATGAGAAAGGATGAGTATGAGGTTAGAGAGAAGCCTGCCTTAAATACATGGATGGAAGGAGGCTTGGACTACATAATGCTGCAGTACTTGAATATTGATGGCATACGTACCATAGGTAGTGTTCTTGGTCAGAGTATTGCTCTGGATTACTATGGGCGACAGGTTGATGGGATGGTTGCAGAATTCACTGACATCAACCGTGAAATGGAAGCAACTGGGAAGTTCAAAATGAAGAGAAAAAAACTTTTCCAGTTGGTGGGAAAGGCGAATTCAAATCTTGCTGATGTCATTTTGAAGCTTGGACTTTTTGAGAGATCTGACATTGCATGGAAGGATGCAAAATATGCTCAAATATGGGAATATCTCAGAGACGAGTTCGAGTTAACACAGAGATTTGCAAGTCTGGATTTCAAATTGAAGTTTGTGGAGCTAATCTTTAGCACTGTTTGGTTTCTGATCCTTGGAGTTGGAACTGCACAATTTTGGCTCCCTGTATCGGGCGAAAGACAAGTGGCCAATTCGCGGGACACCAAAAACAAAAGAAATAAAAGAGTCGACGATTCAAAGCTTCCTCGTCGCTAA MWRTIDAHLSLGIQRLPGSNYGVLVLARCITSSVYSLEWNEPASCSEVGDGGFRNVREGISDGEGDEVEEDSRPSIPVRAYFFSTSVDLRSLVDQNKRNFIPPSSRMTNYVVLKFGDLCNVNTHGASISGSDCCFMVVFQYGSIVLFNVREHEVDGYLKIVEKHASGLLPEMRKDEYEVREKPALNTWMEGGLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMKRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVELIFSTVWFLILGVGTAQFWLPVSGERQVANSRDTKNKRNKRVDDSKLPRR* Homology
BLAST of Chy10G178140 vs. ExPASy Swiss-Prot
Match: Q9FNB2 (Protein RETARDED ROOT GROWTH-LIKE OS=Arabidopsis thaliana OX=3702 GN=RRL PE=2 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 1.0e-108 Identity = 201/260 (77.31%), Postives = 226/260 (86.92%), Query Frame = 0
BLAST of Chy10G178140 vs. ExPASy Swiss-Prot
Match: Q9C565 (Protein RETARDED ROOT GROWTH, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RRG PE=1 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.6e-80 Identity = 153/252 (60.71%), Postives = 194/252 (76.98%), Query Frame = 0
BLAST of Chy10G178140 vs. ExPASy TrEMBL
Match: A0A0A0KNM3 (DUF155 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175960 PE=3 SV=1) HSP 1 Score: 612.1 bits (1577), Expect = 1.5e-171 Identity = 302/305 (99.02%), Postives = 303/305 (99.34%), Query Frame = 0
BLAST of Chy10G178140 vs. ExPASy TrEMBL
Match: A0A1S3BEH0 (uncharacterized protein LOC103488742 OS=Cucumis melo OX=3656 GN=LOC103488742 PE=3 SV=1) HSP 1 Score: 606.3 bits (1562), Expect = 8.5e-170 Identity = 298/305 (97.70%), Postives = 301/305 (98.69%), Query Frame = 0
BLAST of Chy10G178140 vs. ExPASy TrEMBL
Match: A0A6J1CCC7 (uncharacterized protein LOC111010276 OS=Momordica charantia OX=3673 GN=LOC111010276 PE=3 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 7.2e-161 Identity = 284/306 (92.81%), Postives = 295/306 (96.41%), Query Frame = 0
BLAST of Chy10G178140 vs. ExPASy TrEMBL
Match: A0A6J1FTZ0 (uncharacterized protein LOC111447285 OS=Cucurbita moschata OX=3662 GN=LOC111447285 PE=3 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 5.0e-154 Identity = 273/300 (91.00%), Postives = 286/300 (95.33%), Query Frame = 0
BLAST of Chy10G178140 vs. ExPASy TrEMBL
Match: A0A5A7SVQ2 (Sporulation protein RMD1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00320 PE=3 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.8e-151 Identity = 269/277 (97.11%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of Chy10G178140 vs. NCBI nr
Match: XP_004143605.3 (uncharacterized protein LOC101222647 [Cucumis sativus] >KGN50474.1 hypothetical protein Csa_000374 [Cucumis sativus]) HSP 1 Score: 607 bits (1565), Expect = 9.88e-216 Identity = 302/305 (99.02%), Postives = 303/305 (99.34%), Query Frame = 0
BLAST of Chy10G178140 vs. NCBI nr
Match: XP_008445840.1 (PREDICTED: uncharacterized protein LOC103488742 [Cucumis melo]) HSP 1 Score: 601 bits (1550), Expect = 2.44e-213 Identity = 298/305 (97.70%), Postives = 301/305 (98.69%), Query Frame = 0
BLAST of Chy10G178140 vs. NCBI nr
Match: XP_038891437.1 (uncharacterized protein LOC120080856 [Benincasa hispida]) HSP 1 Score: 590 bits (1520), Expect = 4.67e-209 Identity = 294/305 (96.39%), Postives = 298/305 (97.70%), Query Frame = 0
BLAST of Chy10G178140 vs. NCBI nr
Match: XP_022139336.1 (uncharacterized protein LOC111010276 [Momordica charantia]) HSP 1 Score: 572 bits (1475), Expect = 2.84e-202 Identity = 285/309 (92.23%), Postives = 296/309 (95.79%), Query Frame = 0
BLAST of Chy10G178140 vs. NCBI nr
Match: XP_023549259.1 (uncharacterized protein LOC111807669 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551 bits (1419), Expect = 9.06e-194 Identity = 274/312 (87.82%), Postives = 293/312 (93.91%), Query Frame = 0
BLAST of Chy10G178140 vs. TAIR 10
Match: AT5G13610.1 (Protein of unknown function (DUF155) ) HSP 1 Score: 394.8 bits (1013), Expect = 7.4e-110 Identity = 201/260 (77.31%), Postives = 226/260 (86.92%), Query Frame = 0
BLAST of Chy10G178140 vs. TAIR 10
Match: AT1G69380.1 (Protein of unknown function (DUF155) ) HSP 1 Score: 301.2 bits (770), Expect = 1.1e-81 Identity = 153/252 (60.71%), Postives = 194/252 (76.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|