Chy10G177610 (gene) Cucumber (hystrix) v1

Overview
NameChy10G177610
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDUF674 domain-containing protein
LocationchrH10: 12299368 .. 12300458 (-)
RNA-Seq ExpressionChy10G177610
SyntenyChy10G177610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGATGCTTGTCTAATTTGTACGAGAGTGTTGAAGCTTTGAATGACACATATTTGCAGCCAAATCAAAGCAAAGATAAACTTTTAAAGCCTAAAGTTTCGTTCTCTGCGTCAACCTTGCTTTTGCCAAACATTGAATCTTCTGCTGACCAAAAGAAGTTTTACTTGTGTAGAAGTAGATGTGGTTATAACGTTACTACTGACCCTAAGTCCCTTTGCCCGAATTGTAGGTATCAAATGAACCAAATATGTGCATTTGTCAATCCAACAAATGCTACTACACAGGCAACACAGGATGTGGGAGAATTTGGAGGGTTTGTGAAAGGGGTTGTGACTTATATGGTTATGGATGATTTGATTGTCAAACCAATGTCCACCATTTCAAGCATTACTCTCTTGAGCAAGCTCAATATCAAAGAAGTTGGTGCTTTAGAGGAGAAAGTCATAACTTTCATGCCAATCTGGTACTTTTCTTTATTTTTACTATATTTGGACGGAAGTCCTATTAAGTATACACTTTAATATACTTAATACACTTTTCAATGTCAAATAAAGTTACATAAATTCTTAGAATTTATTAGAAATTTAACATTTTTCTGAATTAGATAAAAATATTGAAGTTAGAGATTAAAATGTTTGAGATTTGTGGGTGATTAGAATGTCTTTTTAACTGTTAGACAAAATTGGTGAAAAATATTTACAAATACTAAAATACAAGTCTATTTGAATTGCATATATGCAATAGATTTAAAAAACAGTCTAAATAGATTATATCACGATTGACAAAGAGAGTAGCATATTGCAAATACGAAAGAGAGGAAGGAAGCTGGAGTGCACTTAGTTTAGTATAGACGGGAATATCTCTTTTTCTAGTATTATTTTGTAAATATCTTGAATTATCATGTTGTTATACTTCAAAACAACGTCCTCTATATGTCTTATTATACATTAAGTTAGTTTGTTTATTGGCGTGAATTTTTTTTGTTTGTTTGTATAATTGGTGGCTCATGTTTTAGGTAATAATTAATAGCATTTTCTCTGTTGGTGGGGTAGGGAGTGAAGCTGCTGAGGGCATCCCTGGAATCTAA

mRNA sequence

ATGGCGGGATGCTTGTCTAATTTGTACGAGAGTGTTGAAGCTTTGAATGACACATATTTGCAGCCAAATCAAAGCAAAGATAAACTTTTAAAGCCTAAAGTTTCGTTCTCTGCGTCAACCTTGCTTTTGCCAAACATTGAATCTTCTGCTGACCAAAAGAAGTTTTACTTGTGTAGAAGTAGATGTGGTTATAACGTTACTACTGACCCTAAGTCCCTTTGCCCGAATTGTAGGTATCAAATGAACCAAATATGTGCATTTGTCAATCCAACAAATGCTACTACACAGGCAACACAGGATGTGGGAGAATTTGGAGGGTTTGTGAAAGGGGTTGTGACTTATATGGTTATGGATGATTTGATTGTCAAACCAATGTCCACCATTTCAAGCATTACTCTCTTGAGCAAGCTCAATATCAAAGAAGTTGGTGCTTTAGAGGAGAAAGTCATAACTTTCATGCCAATCTGCATTTTCTCTGTTGGTGGGGTAGGGAGTGAAGCTGCTGAGGGCATCCCTGGAATCTAA

Coding sequence (CDS)

ATGGCGGGATGCTTGTCTAATTTGTACGAGAGTGTTGAAGCTTTGAATGACACATATTTGCAGCCAAATCAAAGCAAAGATAAACTTTTAAAGCCTAAAGTTTCGTTCTCTGCGTCAACCTTGCTTTTGCCAAACATTGAATCTTCTGCTGACCAAAAGAAGTTTTACTTGTGTAGAAGTAGATGTGGTTATAACGTTACTACTGACCCTAAGTCCCTTTGCCCGAATTGTAGGTATCAAATGAACCAAATATGTGCATTTGTCAATCCAACAAATGCTACTACACAGGCAACACAGGATGTGGGAGAATTTGGAGGGTTTGTGAAAGGGGTTGTGACTTATATGGTTATGGATGATTTGATTGTCAAACCAATGTCCACCATTTCAAGCATTACTCTCTTGAGCAAGCTCAATATCAAAGAAGTTGGTGCTTTAGAGGAGAAAGTCATAACTTTCATGCCAATCTGCATTTTCTCTGTTGGTGGGGTAGGGAGTGAAGCTGCTGAGGGCATCCCTGGAATCTAA

Protein sequence

MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRSRCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDLIVKPMSTISSITLLSKLNIKEVGALEEKVITFMPICIFSVGGVGSEAAEGIPGI*
Homology
BLAST of Chy10G177610 vs. ExPASy TrEMBL
Match: A0A0A0KLL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180325 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRS 60
           MAG L+NLY SVEALNDTYLQPNQSKD LLKPKVSFSASTLLLPNIES ADQKK YLC +
Sbjct: 53  MAGSLANLYGSVEALNDTYLQPNQSKDSLLKPKVSFSASTLLLPNIESFADQKKLYLCGN 112

Query: 61  RCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDL 120
           +CGYNV ++P ++CPNCR  M++ C FVNP +A  QATQDVGEFGGFVKGVVTYMVMDDL
Sbjct: 113 KCGYNVASNPTAVCPNCRSAMSRECGFVNPPSANAQATQDVGEFGGFVKGVVTYMVMDDL 172

Query: 121 IVKPMSTISSITLLSKLNIKEVGALEEKVITF------MPICIFSVGGVGSEAAEGIPGI 175
            VKPMSTISSITLL+K NIKEVGALEEKV+T         + +FSVG +G EAAEG+P I
Sbjct: 173 SVKPMSTISSITLLNKFNIKEVGALEEKVVTLDVSQLHSILNMFSVGMIGIEAAEGLPAI 232

BLAST of Chy10G177610 vs. ExPASy TrEMBL
Match: A0A5A7U8V2 (DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3341G00030 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.7e-63
Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRS 60
           M G L+NLYESVEALNDTYLQPNQSKD LLKPKVSFSASTLLLPNIES AD+KKFYLC +
Sbjct: 54  MVGSLANLYESVEALNDTYLQPNQSKDNLLKPKVSFSASTLLLPNIESYADKKKFYLCGN 113

Query: 61  RCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDL 120
           RCGYNV ++P ++CP+CR  M++ CA VNP NA TQATQDVGEFGGFVKGVVTYMVMDDL
Sbjct: 114 RCGYNVASNPTAVCPSCRNAMSRECALVNPPNANTQATQDVGEFGGFVKGVVTYMVMDDL 173

Query: 121 IVKPMSTISSITLLSKLNIKEVGALEEKVIT 152
            VKPMSTISSITLL+K NIKEVGALEEKVIT
Sbjct: 174 SVKPMSTISSITLLNKFNIKEVGALEEKVIT 204

BLAST of Chy10G177610 vs. ExPASy TrEMBL
Match: A0A1S3CGQ2 (uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.7e-63
Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRS 60
           M G L+NLYESVEALNDTYLQPNQSKD LLKPKVSFSASTLLLPNIES AD+KKFYLC +
Sbjct: 54  MVGSLANLYESVEALNDTYLQPNQSKDNLLKPKVSFSASTLLLPNIESYADKKKFYLCGN 113

Query: 61  RCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDL 120
           RCGYNV ++P ++CP+CR  M++ CA VNP NA TQATQDVGEFGGFVKGVVTYMVMDDL
Sbjct: 114 RCGYNVASNPTAVCPSCRNAMSRECALVNPPNANTQATQDVGEFGGFVKGVVTYMVMDDL 173

Query: 121 IVKPMSTISSITLLSKLNIKEVGALEEKVIT 152
            VKPMSTISSITLL+K NIKEVGALEEKVIT
Sbjct: 174 SVKPMSTISSITLLNKFNIKEVGALEEKVIT 204

BLAST of Chy10G177610 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.0e-43
Identity = 104/159 (65.41%), Postives = 116/159 (72.96%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSF--SASTLLLPNIESSADQKKFYLC 60
           M GCL NLYESVE LNDTYLQPNQSKD LLKPKVSF  S+ST+LLPNI+ SA    FYLC
Sbjct: 52  MVGCLGNLYESVETLNDTYLQPNQSKDILLKPKVSFCGSSSTMLLPNIDLSAAATTFYLC 111

Query: 61  RS----RCGYNVTTDPKSLCPNCRYQMNQICAFVNP--TNATTQATQDVGEFGGFVKGVV 120
            S     C  +V+  P ++CP C   M Q+  FV P   +ATT A     E GGFVKGVV
Sbjct: 112 NSTAHANCRRSVSDGPNAICPKCNVPMTQVGTFVKPPSASATTVAAAKEDE-GGFVKGVV 171

Query: 121 TYMVMDDLIVKPMSTISSITLLSKLNIKEVGALEEKVIT 152
           TYMVMDDL VKPMSTISSI LL+K N+KEVGALEEKV+T
Sbjct: 172 TYMVMDDLSVKPMSTISSIALLNKFNVKEVGALEEKVVT 209

BLAST of Chy10G177610 vs. ExPASy TrEMBL
Match: A0A2I4FXU2 (uncharacterized protein LOC109002981 OS=Juglans regia OX=51240 GN=LOC109002981 PE=4 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 4.8e-38
Identity = 88/154 (57.14%), Postives = 114/154 (74.03%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSA--STLLLPNIESSADQKKFYLC 60
           M GCLSNLYES+E LN+TYLQPNQ+KD LLKPKV+  +     LL   + S ++K++Y+C
Sbjct: 52  MVGCLSNLYESIEKLNETYLQPNQNKDTLLKPKVAVVSGYDAPLLLTEDESINRKQYYMC 111

Query: 61  RSRCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMD 120
            S   +NV  +PK++CP C+  MN    FV PT  T+   Q   + GGFVKGVVTYMVMD
Sbjct: 112 -SNYHHNVADNPKAICPACKRLMNTEIPFVAPTRTTSD--QISSDEGGFVKGVVTYMVMD 171

Query: 121 DLIVKPMSTISSITLLSKLNIKEVGALEEKVITF 153
           DL+VKPMSTIS ITLL+K N++E+G+LEE+V+TF
Sbjct: 172 DLVVKPMSTISGITLLNKFNVQELGSLEERVVTF 202

BLAST of Chy10G177610 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 1.76e-79
Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRS 60
           M G L+NLYESVEALNDTYLQPNQSKD LLKPKVSFSASTLLLPNIES AD+KKFYLC +
Sbjct: 54  MVGSLANLYESVEALNDTYLQPNQSKDNLLKPKVSFSASTLLLPNIESYADKKKFYLCGN 113

Query: 61  RCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDL 120
           RCGYNV ++P ++CP+CR  M++ CA VNP NA TQATQDVGEFGGFVKGVVTYMVMDDL
Sbjct: 114 RCGYNVASNPTAVCPSCRNAMSRECALVNPPNANTQATQDVGEFGGFVKGVVTYMVMDDL 173

Query: 121 IVKPMSTISSITLLSKLNIKEVGALEEKVIT 151
            VKPMSTISSITLL+K NIKEVGALEEKVIT
Sbjct: 174 SVKPMSTISSITLLNKFNIKEVGALEEKVIT 204

BLAST of Chy10G177610 vs. NCBI nr
Match: KAE8647976.1 (hypothetical protein Csa_000363 [Cucumis sativus])

HSP 1 Score: 241 bits (615), Expect = 1.68e-77
Identity = 122/151 (80.79%), Postives = 134/151 (88.74%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRS 60
           MAG L+NLY SVEALNDTYLQPNQSKD LLKPKVSFSASTLLLPNIES ADQKK YLC +
Sbjct: 53  MAGSLANLYGSVEALNDTYLQPNQSKDSLLKPKVSFSASTLLLPNIESFADQKKLYLCGN 112

Query: 61  RCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDL 120
           +CGYNV ++P ++CPNCR  M++ C FVNP +A  QATQDVGEFGGFVKGVVTYMVMDDL
Sbjct: 113 KCGYNVASNPTAVCPNCRSAMSRECGFVNPPSANAQATQDVGEFGGFVKGVVTYMVMDDL 172

Query: 121 IVKPMSTISSITLLSKLNIKEVGALEEKVIT 151
            VKPMSTISSITLL+K NIKEVGALEEKV+T
Sbjct: 173 SVKPMSTISSITLLNKFNIKEVGALEEKVVT 203

BLAST of Chy10G177610 vs. NCBI nr
Match: XP_004147723.1 (uncharacterized protein LOC101207526 [Cucumis sativus])

HSP 1 Score: 241 bits (615), Expect = 1.85e-77
Identity = 122/151 (80.79%), Postives = 134/151 (88.74%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCRS 60
           MAG L+NLY SVEALNDTYLQPNQSKD LLKPKVSFSASTLLLPNIES ADQKK YLC +
Sbjct: 53  MAGSLANLYGSVEALNDTYLQPNQSKDSLLKPKVSFSASTLLLPNIESFADQKKLYLCGN 112

Query: 61  RCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMVMDDL 120
           +CGYNV ++P ++CPNCR  M++ C FVNP +A  QATQDVGEFGGFVKGVVTYMVMDDL
Sbjct: 113 KCGYNVASNPTAVCPNCRSAMSRECGFVNPPSANAQATQDVGEFGGFVKGVVTYMVMDDL 172

Query: 121 IVKPMSTISSITLLSKLNIKEVGALEEKVIT 151
            VKPMSTISSITLL+K NIKEVGALEEKV+T
Sbjct: 173 SVKPMSTISSITLLNKFNIKEVGALEEKVVT 203

BLAST of Chy10G177610 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia])

HSP 1 Score: 182 bits (461), Expect = 3.12e-54
Identity = 104/159 (65.41%), Postives = 116/159 (72.96%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSF--SASTLLLPNIESSADQKKFYLC 60
           M GCL NLYESVE LNDTYLQPNQSKD LLKPKVSF  S+ST+LLPNI+ SA    FYLC
Sbjct: 52  MVGCLGNLYESVETLNDTYLQPNQSKDILLKPKVSFCGSSSTMLLPNIDLSAAATTFYLC 111

Query: 61  RS----RCGYNVTTDPKSLCPNCRYQMNQICAFVNP--TNATTQATQDVGEFGGFVKGVV 120
            S     C  +V+  P ++CP C   M Q+  FV P   +ATT A     E GGFVKGVV
Sbjct: 112 NSTAHANCRRSVSDGPNAICPKCNVPMTQVGTFVKPPSASATTVAAAKEDE-GGFVKGVV 171

Query: 121 TYMVMDDLIVKPMSTISSITLLSKLNIKEVGALEEKVIT 151
           TYMVMDDL VKPMSTISSI LL+K N+KEVGALEEKV+T
Sbjct: 172 TYMVMDDLSVKPMSTISSIALLNKFNVKEVGALEEKVVT 209

BLAST of Chy10G177610 vs. NCBI nr
Match: XP_022139199.1 (uncharacterized protein LOC111010168 [Momordica charantia])

HSP 1 Score: 162 bits (411), Expect = 2.18e-47
Identity = 89/155 (57.42%), Postives = 107/155 (69.03%), Query Frame = 0

Query: 1   MAGCLSNLYESVEALNDTYLQPNQSKDKLLKPKVSFSASTLLLPNIESSADQKKFYLCR- 60
           M GCL NLY+SVE LNDTYLQ  Q K+ LL PKVS   ST+LLP++E+S     FY C  
Sbjct: 1   MVGCLGNLYDSVETLNDTYLQSKQIKNTLLNPKVSSCGSTMLLPSVEASTAATTFYGCSY 60

Query: 61  ---SRCGYNVTTDPKSLCPNCRYQMNQICAFVNPTNATTQATQDVGEFGGFVKGVVTYMV 120
                C   V+  P + CP C+ +M Q+  +V P + + Q    VG+ GG+VK VVTYMV
Sbjct: 61  AGYGNCRVYVSDGPNATCPQCKQKMAQVNTYVQPPSGSIQG---VGDQGGYVKDVVTYMV 120

Query: 121 MDDLIVKPMSTISSITLLSKLNIKEVGALEEKVIT 151
           MDDL VKPMSTISSITLL+K NIKEVGALEEK+IT
Sbjct: 121 MDDLTVKPMSTISSITLLNKFNIKEVGALEEKIIT 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLL72.5e-6674.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180325 PE=4 SV=1[more]
A0A5A7U8V25.7e-6382.78DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CGQ25.7e-6382.78uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=... [more]
A0A6J1CBJ81.0e-4365.41uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A2I4FXU24.8e-3857.14uncharacterized protein LOC109002981 OS=Juglans regia OX=51240 GN=LOC109002981 P... [more]
Match NameE-valueIdentityDescription
XP_008461735.11.76e-7982.78PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF... [more]
KAE8647976.11.68e-7780.79hypothetical protein Csa_000363 [Cucumis sativus][more]
XP_004147723.11.85e-7780.79uncharacterized protein LOC101207526 [Cucumis sativus][more]
XP_022138964.13.12e-5465.41uncharacterized protein LOC111010013 [Momordica charantia][more]
XP_022139199.12.18e-4757.42uncharacterized protein LOC111010168 [Momordica charantia][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007750Protein of unknown function DUF674PFAMPF05056DUF674coord: 3..151
e-value: 1.4E-20
score: 73.6
IPR007750Protein of unknown function DUF674PANTHERPTHR33103OS01G0153900 PROTEINcoord: 1..152
NoneNo IPR availablePANTHERPTHR33103:SF71SUBFAMILY NOT NAMEDcoord: 1..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G177610.1Chy10G177610.1mRNA